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Clc09G14760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G14760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPMD domain-containing protein
Genome locationClcChr09:19772700..19776146
RNA-Seq ExpressionClc09G14760
SyntenyClc09G14760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]1.3e-0950Show/hide
Query:  LWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
        L TM+YF E   SG   L+IL+ R+QP ++GLS +VE L  G F+D WP LD +  LP LS+EVP  +G+
Subjt:  LWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
KAA0041757.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.1e-0943.37Show/hide
Query:  DAIMSTSGTDECFLWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
        D   +++ T  CFL TMIYF E    G   L++   R+Q  ++GLS LVE   TG F+D WP LD    LP LS+E+P  +G+
Subjt:  DAIMSTSGTDECFLWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
KAA0057574.1 putative mitochondrial protein [Cucumis melo var. makuwa]8.6e-0948.57Show/hide
Query:  LWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
        L TM+YF E   SG   L+IL+ R+QP ++GLS +VE    G F+D WP LD +  LP LS+EVP  +G+
Subjt:  LWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
TYK04516.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.5e-0847.06Show/hide
Query:  TMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
        TM+YF E   SG   L+IL+ R+QP ++GLS +VE    G F+D WP LD +  LP LS+E+P  +G+
Subjt:  TMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]8.6e-0949.25Show/hide
Query:  MIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
        M+YF E   SG   L+IL+ R+QP ++GLS +VE L  G F+D WP LD +  LP LS+EVP  +G+
Subjt:  MIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein6.4e-1050Show/hide
Query:  LWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
        L TM+YF E   SG   L+IL+ R+QP ++GLS +VE L  G F+D WP LD +  LP LS+EVP  +G+
Subjt:  LWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
A0A5A7UJ48 PMD domain-containing protein7.1e-0947.14Show/hide
Query:  LWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
        L TM+YF E   SG   L+IL+ R+QP ++GLS +VE    G F+D WP LD +  LP LS+E+P  +G+
Subjt:  LWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
A0A5A7UR46 Putative mitochondrial protein4.2e-0948.57Show/hide
Query:  LWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
        L TM+YF E   SG   L+IL+ R+QP ++GLS +VE    G F+D WP LD +  LP LS+EVP  +G+
Subjt:  LWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
A0A5D3D7V4 PMD domain-containing protein4.2e-0949.25Show/hide
Query:  MIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
        M+YF E   SG   L+IL+ R+QP ++GLS +VE L  G F+D WP LD +  LP LS+EVP  +G+
Subjt:  MIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
A0A5D3DTH1 Putative mitochondrial protein2.4e-0943.37Show/hide
Query:  DAIMSTSGTDECFLWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
        D   +++ T  CFL TMIYF E    G   L++   R+Q  ++GLS LVE   TG F+D WP LD    LP LS+E+P  +G+
Subjt:  DAIMSTSGTDECFLWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGACTTGGGATGACCCTGGGAAGATCTTAATGACTGTGGATCTTAGCGACTGTGCCTCGCCGTCTCCCCACAGGGATGACCCTGTGAAGATCTTAGCTTTTGTGGA
TCTTAGCGACTGTGGCTCACTGTCTCCCTACAGGGATGACCTCGGGAAGATCTTAGTTTCTGTGGATCTTAGCGACTGTGGCTCGCCGTCACCAGACAATCGAGACGGCT
CTAGGGATCCAAATGACCCTAGTCTTGGCCTTAGGGTTGGGCCAAAGGTAGATGCCACCTTTGGGCAGCCGCCTAGAGGGGGTGACGCTATAATGTCAACATCCGGCACG
GACGAATGTTTCCTTTGGACAATGATTTACTTTATGGAGCATGTCTCGTCTGGAAAAACGCAGCTCATGATCCTTGCATTGAGGCATCAACCTATAAAGAATGGACTTAG
TTTTCTTGTGGAGGCTCTGTTAACTGGTCCTTTTTCAGATGTCTGGCCAGAGTTAGACGAAGATATGACCCTCCCTGAACTCTCTATTGAGGTGCCCTTTCATCAAGGGG
AAAGGTGTGGATATTACGATCTTCAGTTCATAACAAAGCCCCTTCTCCAAATCGATTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGACTTGGGATGACCCTGGGAAGATCTTAATGACTGTGGATCTTAGCGACTGTGCCTCGCCGTCTCCCCACAGGGATGACCCTGTGAAGATCTTAGCTTTTGTGGA
TCTTAGCGACTGTGGCTCACTGTCTCCCTACAGGGATGACCTCGGGAAGATCTTAGTTTCTGTGGATCTTAGCGACTGTGGCTCGCCGTCACCAGACAATCGAGACGGCT
CTAGGGATCCAAATGACCCTAGTCTTGGCCTTAGGGTTGGGCCAAAGGTAGATGCCACCTTTGGGCAGCCGCCTAGAGGGGGTGACGCTATAATGTCAACATCCGGCACG
GACGAATGTTTCCTTTGGACAATGATTTACTTTATGGAGCATGTCTCGTCTGGAAAAACGCAGCTCATGATCCTTGCATTGAGGCATCAACCTATAAAGAATGGACTTAG
TTTTCTTGTGGAGGCTCTGTTAACTGGTCCTTTTTCAGATGTCTGGCCAGAGTTAGACGAAGATATGACCCTCCCTGAACTCTCTATTGAGGTGCCCTTTCATCAAGGGG
AAAGGTGTGGATATTACGATCTTCAGTTCATAACAAAGCCCCTTCTCCAAATCGATTGTTAA
Protein sequenceShow/hide protein sequence
MWTWDDPGKILMTVDLSDCASPSPHRDDPVKILAFVDLSDCGSLSPYRDDLGKILVSVDLSDCGSPSPDNRDGSRDPNDPSLGLRVGPKVDATFGQPPRGGDAIMSTSGT
DECFLWTMIYFMEHVSSGKTQLMILALRHQPIKNGLSFLVEALLTGPFSDVWPELDEDMTLPELSIEVPFHQGERCGYYDLQFITKPLLQIDC