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Clc09G15040 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G15040
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCalcium-binding EF-hand family protein
Genome locationClcChr09:20538974..20539900
RNA-Seq ExpressionClc09G15040
SyntenyClc09G15040
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647336.1 hypothetical protein Csa_003380 [Cucumis sativus]1.8e-6392.7Show/hide
Query:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR
        MSVEILDSATIVNFVEDD+AFGA++RDRFAHLDTN DGLLSYSEMLEELHTLRVFETHFGIDVKPDP+ELS+VYSSLFLQFDRDSSGTVDLDEF AE++R
Subjt:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA
        MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA

XP_008449396.1 PREDICTED: uncharacterized protein LOC103491294 [Cucumis melo]1.8e-6392.7Show/hide
Query:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR
        MSVEILDSATIVNFVEDD+AFGA++RDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELS+VYSSLFLQFD DSSGTVDLDEF AE++R
Subjt:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA

XP_011657544.1 uncharacterized protein LOC105435869 [Cucumis sativus]1.8e-6392.7Show/hide
Query:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR
        MSVEILDSATIVNFVEDD+AFGA++RDRFAHLDTN DGLLSYSEMLEELHTLRVFETHFGIDVKPDP+ELS+VYSSLFLQFDRDSSGTVDLDEF AE++R
Subjt:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA
        MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA

XP_022135623.1 uncharacterized protein LOC111007532 [Momordica charantia]6.8e-5886.13Show/hide
Query:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR
        MSVEILDSATIVNFVED+ AF A++RDRFAHLDTNHDGLLSY+EML EL +LRVFE HFGIDVKPDP+ELSTVYSSLFLQFD DSSG VDLDEF AE++R
Subjt:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA
        MMLA ANGMGFLPVQMVLEEGSFLMKAVERET I+AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA

XP_038888297.1 uncharacterized protein LOC120078146 [Benincasa hispida]2.8e-6492.7Show/hide
Query:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR
        MSVEILDSATIVNFVEDD+AFGA++RDRFAHLDTNHDGLLSY+EMLEELHTLRVFETHFGIDVKPDP+ELS+VYSSLFLQFDRDSSGTVDLDEFMAE++R
Subjt:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAI+AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA

TrEMBL top hitse value%identityAlignment
A0A0A0KHT7 Uncharacterized protein8.9e-6492.7Show/hide
Query:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR
        MSVEILDSATIVNFVEDD+AFGA++RDRFAHLDTN DGLLSYSEMLEELHTLRVFETHFGIDVKPDP+ELS+VYSSLFLQFDRDSSGTVDLDEF AE++R
Subjt:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA
        MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA

A0A1S3BLY5 uncharacterized protein LOC1034912948.9e-6492.7Show/hide
Query:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR
        MSVEILDSATIVNFVEDD+AFGA++RDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELS+VYSSLFLQFD DSSGTVDLDEF AE++R
Subjt:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA

A0A5D3E445 Calcium-binding EF-hand family protein8.9e-6492.7Show/hide
Query:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR
        MSVEILDSATIVNFVEDD+AFGA++RDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELS+VYSSLFLQFD DSSGTVDLDEF AE++R
Subjt:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA

A0A6J1C5B4 uncharacterized protein LOC1110075323.3e-5886.13Show/hide
Query:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR
        MSVEILDSATIVNFVED+ AF A++RDRFAHLDTNHDGLLSY+EML EL +LRVFE HFGIDVKPDP+ELSTVYSSLFLQFD DSSG VDLDEF AE++R
Subjt:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA
        MMLA ANGMGFLPVQMVLEEGSFLMKAVERET I+AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA

A0A6J1JN55 uncharacterized protein LOC1114861982.6e-5583.7Show/hide
Query:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR
        MSVEILDSATIVNFVED+ AFGA++ DRFAHLDTNHDGLLSYSEML+EL +LRV E  FGIDVKPDP+ELS+VYSS+FLQFDR+SSGTVDLDEF AE++R
Subjt:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAII
        MMLAMANG+G LPVQMVLEEGSFLMKAVERE AI+
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein2.4e-0831.25Show/hide
Query:  ILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLA
        ++ S T++ F+ D  +F +   D F  LD + +G+LS SE+ + L+ +   E+    +V P  +E   VY+++F +F  D     +  + +AE   ++ A
Subjt:  ILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLA

Query:  MANGMGFLPVQMVLEEGSFLMKAVERET
        MA G+G  PV MV+     +MKAV  E+
Subjt:  MANGMGFLPVQMVLEEGSFLMKAVERET

AT2G44310.1 Calcium-binding EF-hand family protein5.0e-2742.22Show/hide
Query:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR
        M V ++D +T+ +FV+D+  F   + +RFA LD N DG+LS SE+ +   ++R+ E+HFG+DV    +EL+ +Y S+F +FD D SG+VDL+EF +E ++
Subjt:  MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRR

Query:  MMLAMANGMGFLPVQMVL--EEGSFLMKAVERETA
        ++LA+A+G+G  P+ MVL  ++ +FL KA + E +
Subjt:  MMLAMANGMGFLPVQMVL--EEGSFLMKAVERETA

AT4G38810.2 Calcium-binding EF-hand family protein1.1e-0524.8Show/hide
Query:  EILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMML
        ++LD + IV  VE++  F  ++  +F  LD + DG LS +E+   +  +       G+  +    +   +YS +  +F   S   V   EF      ++L
Subjt:  EILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMML

Query:  AMANGMGFLPVQMVLEEGSFLMKAV
         MA G+   P+ ++  +G  L + V
Subjt:  AMANGMGFLPVQMVLEEGSFLMKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGAAATATTGGATAGTGCCACCATCGTCAACTTCGTCGAAGACGATATAGCTTTTGGTGCATACATGAGAGACCGTTTTGCTCACCTTGACACCAACCATGA
TGGTCTTCTTTCCTACAGTGAGATGTTGGAGGAGTTACACACCCTCAGGGTCTTCGAGACCCATTTCGGAATCGATGTGAAGCCTGATCCGGAGGAGCTTTCTACAGTTT
ATAGTTCTTTGTTTTTACAGTTTGATCGTGACTCGAGTGGAACAGTTGATCTGGATGAGTTTATGGCTGAGAGCAGAAGGATGATGTTAGCTATGGCTAATGGGATGGGA
TTCTTACCTGTTCAGATGGTGTTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACAGCAATAATAGCCGCTTGA
mRNA sequenceShow/hide mRNA sequence
TACATTCCATTACTTACAACATCCCTTTTTATGCTCTTAAATCAACGATTTGCCCTCAAAACCATCAAAACAAAACAAATTGTCAGAAACAATTGGCTATAGAGAGGATT
GAACCATCCCTCTGGTTCCTCTTTATATGAAATCCTGAACCATCCCTCCGCTCATCAAAAGCCCAATTCAAAATCTTCTCTTCTCATTTCCTCTGTTTATCAGCTAAAAG
ATCAGAACTAGCTAAAATGAGTGTGGAAATATTGGATAGTGCCACCATCGTCAACTTCGTCGAAGACGATATAGCTTTTGGTGCATACATGAGAGACCGTTTTGCTCACC
TTGACACCAACCATGATGGTCTTCTTTCCTACAGTGAGATGTTGGAGGAGTTACACACCCTCAGGGTCTTCGAGACCCATTTCGGAATCGATGTGAAGCCTGATCCGGAG
GAGCTTTCTACAGTTTATAGTTCTTTGTTTTTACAGTTTGATCGTGACTCGAGTGGAACAGTTGATCTGGATGAGTTTATGGCTGAGAGCAGAAGGATGATGTTAGCTAT
GGCTAATGGGATGGGATTCTTACCTGTTCAGATGGTGTTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACAGCAATAATAGCCGCTTGATCATTCTGGA
TGCACTTCTAATGAATAATTGAATAATTTTACCTTTTACTTTCTGTAGTAGTAAATTCAAAATCAAATTCAGAAGAGTGAGCTTTTTCTCAACTGAAATAAAACATATTG
TTTAGCTATTTCAGCGAAGGAAGGTCGATGCATGAAAATTTTCCTCTAGATTAAACAAAAGAATAGCCGTTAAGTTATACATAATTCTACAGCTAAACAAACTGTATTTT
CTACTTGAAAATGGATGATAGTTATTACAAGAACATGGACAATTCAG
Protein sequenceShow/hide protein sequence
MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMG
FLPVQMVLEEGSFLMKAVERETAIIAA