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Clc09G15120 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G15120
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDUF4283 domain-containing protein
Genome locationClcChr09:20745578..20748121
RNA-Seq ExpressionClc09G15120
SyntenyClc09G15120
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047412.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa]1.9e-1157.81Show/hide
Query:  IPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI
        IP+ELWTE  LA++A+VV KP+ LD   KE+RRL++ARVCVE+  DS MP+ I V  RG DF +
Subjt:  IPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI

TYK26642.1 uncharacterized protein E5676_scaffold313G002880 [Cucumis melo var. makuwa]5.6e-1136.5Show/hide
Query:  IPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTIPE-------PRMGVGGIVVKRVSLENCNPYASWSF-
        IP+ELW E  LA++A+ V KPI+LD   KE RRL++ARVCVE+   S MP+ I V  RG +F + E       P  G G      +  E C      SF 
Subjt:  IPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTIPE-------PRMGVGGIVVKRVSLENCNPYASWSF-

Query:  --EEGKVGPTKGRLKGE--------EDFTVVSKWKQE
          EEG++  +  R   +        ++FT+V++ K +
Subjt:  --EEGKVGPTKGRLKGE--------EDFTVVSKWKQE

TYK26656.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]1.9e-1148.86Show/hide
Query:  KFGGAIGPMSLCFSS---W----SIPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI
        K+  AI P S  F+S   W     +P+ELWTE  LA++A  V KPI+LD   KE+RRL++ARVCVE+   S MPS I V  RG +F +
Subjt:  KFGGAIGPMSLCFSS---W----SIPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI

XP_008460524.1 PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo]5.6e-1147.73Show/hide
Query:  KFGGAIGPMSLCFSS---W----SIPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI
        K+   I P S  F+S   W     +P+ELWTE  LA++A  V KPI+LD   KE+RRL++ARVCVE+   S MPS I V  RG +F +
Subjt:  KFGGAIGPMSLCFSS---W----SIPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI

XP_031745634.1 uncharacterized protein LOC116406053 [Cucumis sativus]5.6e-1148.44Show/hide
Query:  IPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI
        IPLELWT+  LA++A+ + KP+++D   KE+RRL++AR+CVE++ DS+MP+ + V  RG +F +
Subjt:  IPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI

TrEMBL top hitse value%identityAlignment
A0A1S3CC83 uncharacterized protein LOC1034993232.7e-1147.73Show/hide
Query:  KFGGAIGPMSLCFSS---W----SIPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI
        K+   I P S  F+S   W     +P+ELWTE  LA++A  V KPI+LD   KE+RRL++ARVCVE+   S MPS I V  RG +F +
Subjt:  KFGGAIGPMSLCFSS---W----SIPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI

A0A5A7TVB8 Putative non-LTR retroelement reverse transcriptase9.4e-1257.81Show/hide
Query:  IPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI
        IP+ELWTE  LA++A+VV KP+ LD   KE+RRL++ARVCVE+  DS MP+ I V  RG DF +
Subjt:  IPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI

A0A5A7V507 DUF4283 domain-containing protein2.7e-1147.73Show/hide
Query:  KFGGAIGPMSLCFSS---W----SIPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI
        K+   I P S  F+S   W     +P+ELWTE  LA++A  V KPI+LD   KE+RRL++ARVCVE+   S MPS I V  RG +F +
Subjt:  KFGGAIGPMSLCFSS---W----SIPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI

A0A5D3DSG9 DUF4283 domain-containing protein9.4e-1248.86Show/hide
Query:  KFGGAIGPMSLCFSS---W----SIPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI
        K+  AI P S  F+S   W     +P+ELWTE  LA++A  V KPI+LD   KE+RRL++ARVCVE+   S MPS I V  RG +F +
Subjt:  KFGGAIGPMSLCFSS---W----SIPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTI

A0A5D3DT40 DUF4283 domain-containing protein2.7e-1136.5Show/hide
Query:  IPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTIPE-------PRMGVGGIVVKRVSLENCNPYASWSF-
        IP+ELW E  LA++A+ V KPI+LD   KE RRL++ARVCVE+   S MP+ I V  RG +F + E       P  G G      +  E C      SF 
Subjt:  IPLELWTERELAIIANVVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTIPE-------PRMGVGGIVVKRVSLENCNPYASWSF-

Query:  --EEGKVGPTKGRLKGE--------EDFTVVSKWKQE
          EEG++  +  R   +        ++FT+V++ K +
Subjt:  --EEGKVGPTKGRLKGE--------EDFTVVSKWKQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGCCGATTGAACCGGTTCCTGAACTGGATGGGTATGGATGGGAATGCGAGATGGGGCCTGCTCGGGTTGTGGATTGGGTTGGGAGGGCACTGCAGACT
TTGCATCGTCATTGGCCTTCTCATCTGGGCGAGCCGGCGCGAGTTGCGAGTGGATCTGGGTCAACTAAGCCAATGATGTCACCAATTCAACTTGATTCGGTTTGG
GGCGGAAAGTTTGGTGGAGCAATCGGCCCAATGTCTTTGTGTTTCAGTTCGTGGTCGATTCCTTTGGAGTTGTGGACCGAGAGAGAGCTAGCTATTATAGCAAAT
GTTGTAAGCAAACCTATTGCCTTGGATAGGATTGCGAAGGAGAAGCGTAGGTTAACCTTTGCTAGAGTGTGTGTTGAGATTTCTAGTGATTCTGTGATGCCTTCT
TCAATTGGTGTCCGGAGTAGAGGGCGAGATTTTACAATTCCGGAGCCTAGAATGGGGGTTGGAGGGATAGTTGTGAAGAGGGTAAGTTTGGAGAATTGTAATCCA
TATGCCTCTTGGAGTTTTGAAGAGGGGAAGGTTGGTCCTACAAAGGGCCGGCTGAAGGGTGAGGAAGACTTTACTGTGGTGTCCAAATGGAAGCAAGAAGGGAGT
CCCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAGCCGATTGAACCGGTTCCTGAACTGGATGGGTATGGATGGGAATGCGAGATGGGGCCTGCTCGGGTTGTGGATTGGGTTGGGAGGGCACTGCAGACT
TTGCATCGTCATTGGCCTTCTCATCTGGGCGAGCCGGCGCGAGTTGCGAGTGGATCTGGGTCAACTAAGCCAATGATGTCACCAATTCAACTTGATTCGGTTTGG
GGCGGAAAGTTTGGTGGAGCAATCGGCCCAATGTCTTTGTGTTTCAGTTCGTGGTCGATTCCTTTGGAGTTGTGGACCGAGAGAGAGCTAGCTATTATAGCAAAT
GTTGTAAGCAAACCTATTGCCTTGGATAGGATTGCGAAGGAGAAGCGTAGGTTAACCTTTGCTAGAGTGTGTGTTGAGATTTCTAGTGATTCTGTGATGCCTTCT
TCAATTGGTGTCCGGAGTAGAGGGCGAGATTTTACAATTCCGGAGCCTAGAATGGGGGTTGGAGGGATAGTTGTGAAGAGGGTAAGTTTGGAGAATTGTAATCCA
TATGCCTCTTGGAGTTTTGAAGAGGGGAAGGTTGGTCCTACAAAGGGCCGGCTGAAGGGTGAGGAAGACTTTACTGTGGTGTCCAAATGGAAGCAAGAAGGGAGT
CCCGATTGA
Protein sequenceShow/hide protein sequence
MTKPIEPVPELDGYGWECEMGPARVVDWVGRALQTLHRHWPSHLGEPARVASGSGSTKPMMSPIQLDSVWGGKFGGAIGPMSLCFSSWSIPLELWTERELAIIAN
VVSKPIALDRIAKEKRRLTFARVCVEISSDSVMPSSIGVRSRGRDFTIPEPRMGVGGIVVKRVSLENCNPYASWSFEEGKVGPTKGRLKGEEDFTVVSKWKQEGS
PD