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Clc09G15565 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G15565
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAspartate racemase
Genome locationClcChr09:21395920..21401035
RNA-Seq ExpressionClc09G15565
SyntenyClc09G15565
Gene Ontology termsGO:0047661 - amino-acid racemase activity (molecular function)
InterPro domainsIPR004380 - Aspartate racemase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044428.1 putative amino-acid racemase [Cucumis melo var. makuwa]1.4e-2165.62Show/hide
Query:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
        CPVTFLHMADCVARELKEAKLKPL+AGSPL IG                       VVLP K TMEHTVIPA+EALNRKDIEGAR LL IALQ ++
Subjt:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
KAG6581916.1 hypothetical protein SDJN03_21918, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2165.62Show/hide
Query:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
        CPVTFLHMADCVARELKEAKLKPL+AGSPL IG                       VVLP K TMEHTVIPA+EALNRKDIEGAR LL IALQ ++
Subjt:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
XP_004152211.1 uncharacterized protein LOC101217164 [Cucumis sativus]1.4e-2165.62Show/hide
Query:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
        CPVTFLHMADCVARELKEAKLKPL+AGSPL IG                       VVLP K TMEHTVIPA+EALNRKDIEGAR LL IALQ ++
Subjt:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
XP_022955999.1 uncharacterized protein LOC111457829 [Cucurbita moschata]1.4e-2165.62Show/hide
Query:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
        CPVTFLHMADCVARELKEAKLKPL+AGSPL IG                       VVLP K TMEHTVIPA+EALNRKDIEGAR LL IALQ ++
Subjt:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
XP_023528030.1 uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo]1.4e-2165.62Show/hide
Query:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
        CPVTFLHMADCVARELKEAKLKPL+AGSPL IG                       VVLP K TMEHTVIPA+EALNRKDIEGAR LL IALQ ++
Subjt:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
TrEMBL top hitse value%identityAlignment
A0A0A0KVD7 Uncharacterized protein6.7e-2265.62Show/hide
Query:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
        CPVTFLHMADCVARELKEAKLKPL+AGSPL IG                       VVLP K TMEHTVIPA+EALNRKDIEGAR LL IALQ ++
Subjt:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
A0A1S4E0P1 probable amino-acid racemase6.7e-2265.62Show/hide
Query:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
        CPVTFLHMADCVARELKEAKLKPL+AGSPL IG                       VVLP K TMEHTVIPA+EALNRKDIEGAR LL IALQ ++
Subjt:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
A0A5A7TNI1 Putative amino-acid racemase6.7e-2265.62Show/hide
Query:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
        CPVTFLHMADCVARELKEAKLKPL+AGSPL IG                       VVLP K TMEHTVIPA+EALNRKDIEGAR LL IALQ ++
Subjt:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
A0A6J1GXT9 uncharacterized protein LOC1114578296.7e-2265.62Show/hide
Query:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
        CPVTFLHMADCVARELKEAKLKPL+AGSPL IG                       VVLP K TMEHTVIPA+EALNRKDIEGAR LL IALQ ++
Subjt:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
A0A6J1IUZ5 uncharacterized protein LOC1114795491.5e-2164.58Show/hide
Query:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
        CPVTFLHMADCVAREL+EAKLKPL+AGSPL IG                       VVLP K TMEHTVIPA+EALNRKDIEGAR LL IALQ ++
Subjt:  CPVTFLHMADCVARELKEAKLKPLKAGSPLWIG-----------------------VVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15410.1 aspartate-glutamate racemase family3.4e-1850Show/hide
Query:  VTFLHMADCVARELKEAKLKPLKAGSPLWIGV-----------------------VLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM
        V  LHM +C+A+EL+EAK+KPL+AG+PL +GV                       VLP K TMEHTVIP++EA+ RKD+EGAR LL IALQ ++
Subjt:  VTFLHMADCVARELKEAKLKPLKAGSPLWIGV-----------------------VLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTACCAAAGATGGAGAATCTGGTGTTTTGTTCTTTGCTCTGACCCAACTCTTAGTAATTAGATCCAAGTGCTTGATTGAAGTTAGGTGTCCTGTTACCTTCCT
TCACATGGCTGATTGTGTTGCTAGAGAGCTCAAGGAAGCTAAGTTGAAACCACTCAAAGCTGGAAGTCCCTTATGGATTGGAGTGGTTCTCCCAGCCAAAACAACTATGG
AGCATACCGTAATTCCTGCAGTTGAGGCTCTAAACAGAAAGGACATAGAAGGGGCAAGGAGGTTACTAGGAATTGCACTTCAAAAAATTATGTCAACTGAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACTTACCAAAGATGGAGAATCTGGTGTTTTGTTCTTTGCTCTGACCCAACTCTTAGTAATTAGATCCAAGTGCTTGATTGAAGTTAGGTGTCCTGTTACCTTCCT
TCACATGGCTGATTGTGTTGCTAGAGAGCTCAAGGAAGCTAAGTTGAAACCACTCAAAGCTGGAAGTCCCTTATGGATTGGAGTGGTTCTCCCAGCCAAAACAACTATGG
AGCATACCGTAATTCCTGCAGTTGAGGCTCTAAACAGAAAGGACATAGAAGGGGCAAGGAGGTTACTAGGAATTGCACTTCAAAAAATTATGTCAACTGAAAAGTAA
Protein sequenceShow/hide protein sequence
MALTKDGESGVLFFALTQLLVIRSKCLIEVRCPVTFLHMADCVARELKEAKLKPLKAGSPLWIGVVLPAKTTMEHTVIPAVEALNRKDIEGARRLLGIALQKIMSTEK