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Clc09G15630 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G15630
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionABC transporter C family member 2-like
Genome locationClcChr09:21574804..21576504
RNA-Seq ExpressionClc09G15630
SyntenyClc09G15630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063977.1 ABC transporter C family member 2-like [Cucumis melo var. makuwa]1.5e-0639.08Show/hide
Query:  MEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSKI--NLLWLAYSML
        ME+ SC +   H+ IW E   F +ED EA R +A+S  Q+VWF +++LKL + P   FY+K    + G   LSK    L W+  ++L
Subjt:  MEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSKI--NLLWLAYSML

KAA0063979.1 hypothetical protein E6C27_scaffold616G001380 [Cucumis melo var. makuwa]1.1e-0437.84Show/hide
Query:  MEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSK
        MEVRS  +    +CIW +   F IED + R+ + +S +Q+ WFI ++L L ++    F+ K  RD  G T+L+K
Subjt:  MEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSK

TYJ98411.1 nucleotide binding protein [Cucumis melo var. makuwa]1.7e-0533.72Show/hide
Query:  VQMEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSKINLLWLAYSM
        V+ +V  C + +V +CIW +   F IED EAR+ ++LS +Q  WF++ I +  + P   F  +   D+ G T+L K  L +L+ ++
Subjt:  VQMEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSKINLLWLAYSM

TYK02777.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]2.3e-0744.59Show/hide
Query:  MEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSK
        MEV SC + D  +CIW E  +F IED + ++ I+LS +Q+ WF  SI  L K P   F+ K   D+ G+T+LSK
Subjt:  MEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSK

TrEMBL top hitse value%identityAlignment
A0A5A7VAE9 ABC transporter C family member 2-like7.4e-0739.08Show/hide
Query:  MEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSKI--NLLWLAYSML
        ME+ SC +   H+ IW E   F +ED EA R +A+S  Q+VWF +++LKL + P   FY+K    + G   LSK    L W+  ++L
Subjt:  MEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSKI--NLLWLAYSML

A0A5A7VEL7 Uncharacterized protein5.3e-0537.84Show/hide
Query:  MEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSK
        MEVRS  +    +CIW +   F IED + R+ + +S +Q+ WFI ++L L ++    F+ K  RD  G T+L+K
Subjt:  MEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSK

A0A5D3BIA6 Nucleotide binding protein8.2e-0633.72Show/hide
Query:  VQMEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSKINLLWLAYSM
        V+ +V  C + +V +CIW +   F IED EAR+ ++LS +Q  WF++ I +  + P   F  +   D+ G T+L K  L +L+ ++
Subjt:  VQMEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSKINLLWLAYSM

A0A5D3BTI0 Transposon TX1 uncharacterized1.1e-0744.59Show/hide
Query:  MEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSK
        MEV SC + D  +CIW E  +F IED + ++ I+LS +Q+ WF  SI  L K P   F+ K   D+ G+T+LSK
Subjt:  MEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQVVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTCCAAGCCACCTGTTCTACCAATTCTGGAGAAGAATCTTTTCTTCCAAGAAGCCAATCTCCTCAGGCCTGTCGCATCCTACAAACCCAGTCCATGTACCCAAC
TTCCTTGAGCCTAAAACCCTCTGGTATAGGATTATTGCGAGCAAGTAAGAACCTCATTATTTTGAATGGTTGTCAGCCCGATTTTGAAGTACCGTTTGTGCAAATGGAAG
TCAGAAGCTGCTCTTTGAAAGATGTTCACTTCTGTATTTGGCATGAGTCAAAAGAATTCAGCATCGAAGACAGGGAAGCCAGAAGGAAGATAGCCCTTTCACTATCGCAA
GTCGTTTGGTTCATCCAAAGCATATTGAAACTGTCCAAAAATCCAATAACGAGTTTCTATGAGAAAAAGAGAAGAGATGAGCATGGAGTAACAAAGCTATCCAAGATAAA
CCTCTTATGGCTGGCATATTCGATGCTTAGTGTGGCCCTCATCAGGAGGGAGAAACTTCATCCATGTCCCAACAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTCCAAGCCACCTGTTCTACCAATTCTGGAGAAGAATCTTTTCTTCCAAGAAGCCAATCTCCTCAGGCCTGTCGCATCCTACAAACCCAGTCCATGTACCCAAC
TTCCTTGAGCCTAAAACCCTCTGGTATAGGATTATTGCGAGCAAGTAAGAACCTCATTATTTTGAATGGTTGTCAGCCCGATTTTGAAGTACCGTTTGTGCAAATGGAAG
TCAGAAGCTGCTCTTTGAAAGATGTTCACTTCTGTATTTGGCATGAGTCAAAAGAATTCAGCATCGAAGACAGGGAAGCCAGAAGGAAGATAGCCCTTTCACTATCGCAA
GTCGTTTGGTTCATCCAAAGCATATTGAAACTGTCCAAAAATCCAATAACGAGTTTCTATGAGAAAAAGAGAAGAGATGAGCATGGAGTAACAAAGCTATCCAAGATAAA
CCTCTTATGGCTGGCATATTCGATGCTTAGTGTGGCCCTCATCAGGAGGGAGAAACTTCATCCATGTCCCAACAGGTGA
Protein sequenceShow/hide protein sequence
MKLQATCSTNSGEESFLPRSQSPQACRILQTQSMYPTSLSLKPSGIGLLRASKNLIILNGCQPDFEVPFVQMEVRSCSLKDVHFCIWHESKEFSIEDREARRKIALSLSQ
VVWFIQSILKLSKNPITSFYEKKRRDEHGVTKLSKINLLWLAYSMLSVALIRREKLHPCPNR