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Clc09G15830 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G15830
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCOP9 signalosome complex subunit 8-like
Genome locationClcChr09:23354935..23365188
RNA-Seq ExpressionClc09G15830
SyntenyClc09G15830
Gene Ontology termsGO:0000338 - protein deneddylation (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0009753 - response to jasmonic acid (biological process)
GO:0010387 - COP9 signalosome assembly (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008180 - COP9 signalosome (cellular component)
InterPro domainsIPR033205 - COP9 signalosome, subunit CSN8
IPR033464 - CSN8/PSMD8/EIF3K


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449425.1 PREDICTED: COP9 signalosome complex subunit 8 isoform X1 [Cucumis melo]1.8e-6194.31Show/hide
Query:  AAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVS
        AAAEGIAY+DEWPYAIHFLGY YVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLW RDH GVYEAIHE DWCQEVQGLLAAFSDLYRRRMFQLLVS
Subjt:  AAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVS

Query:  AYSTISIHDTAQFLGMNEEEAKV
        AYSTIS+HDTAQ LGMNEEEAKV
Subjt:  AYSTISIHDTAQFLGMNEEEAKV

XP_008449426.1 PREDICTED: COP9 signalosome complex subunit 8 isoform X2 [Cucumis melo]1.8e-6194.31Show/hide
Query:  AAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVS
        AAAEGIAY+DEWPYAIHFLGY YVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLW RDH GVYEAIHE DWCQEVQGLLAAFSDLYRRRMFQLLVS
Subjt:  AAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVS

Query:  AYSTISIHDTAQFLGMNEEEAKV
        AYSTIS+HDTAQ LGMNEEEAKV
Subjt:  AYSTISIHDTAQFLGMNEEEAKV

XP_023531250.1 COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo]1.8e-6191.41Show/hide
Query:  EERKRDAAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRM
        +E    AAAEGIAYQDEWPY IHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAI  FDWCQEV+GLLAAFSDLYR+RM
Subjt:  EERKRDAAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRM

Query:  FQLLVSAYSTISIHDTAQFLGMNEEEAK
        FQLLVSAYSTISIHDTA FLGMNEEEAK
Subjt:  FQLLVSAYSTISIHDTAQFLGMNEEEAK

XP_031743776.1 COP9 signalosome complex subunit 8 isoform X2 [Cucumis sativus]4.0e-6191.87Show/hide
Query:  AAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVS
        AAAEGIAY+DEWPYAIHFLGY YVDDINSARFLWK+IPSTIKENRPELVA+WKIGQKLW+RDH GVYEAIHE DWCQEVQGLLAAFSDLYRRRMFQLLVS
Subjt:  AAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVS

Query:  AYSTISIHDTAQFLGMNEEEAKV
        AYSTIS+HDTAQFLGMNEEE  V
Subjt:  AYSTISIHDTAQFLGMNEEEAKV

XP_038888574.1 COP9 signalosome complex subunit 8 [Benincasa hispida]5.6e-6396.75Show/hide
Query:  AAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVS
        AAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWK+IPSTIKENRPEL AVWKIGQKLWIRDHGGVYEAI EFDWCQEVQGLLAAFSDLYRRRMFQLLVS
Subjt:  AAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVS

Query:  AYSTISIHDTAQFLGMNEEEAKV
        AYSTISIHDTA+FLGMNEEEAKV
Subjt:  AYSTISIHDTAQFLGMNEEEAKV

TrEMBL top hitse value%identityAlignment
A0A1S3BMN0 COP9 signalosome complex subunit 8 isoform X18.7e-6294.31Show/hide
Query:  AAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVS
        AAAEGIAY+DEWPYAIHFLGY YVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLW RDH GVYEAIHE DWCQEVQGLLAAFSDLYRRRMFQLLVS
Subjt:  AAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVS

Query:  AYSTISIHDTAQFLGMNEEEAKV
        AYSTIS+HDTAQ LGMNEEEAKV
Subjt:  AYSTISIHDTAQFLGMNEEEAKV

A0A1S3BMY1 COP9 signalosome complex subunit 8 isoform X28.7e-6294.31Show/hide
Query:  AAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVS
        AAAEGIAY+DEWPYAIHFLGY YVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLW RDH GVYEAIHE DWCQEVQGLLAAFSDLYRRRMFQLLVS
Subjt:  AAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVS

Query:  AYSTISIHDTAQFLGMNEEEAKV
        AYSTIS+HDTAQ LGMNEEEAKV
Subjt:  AYSTISIHDTAQFLGMNEEEAKV

A0A6J1EJA8 COP9 signalosome complex subunit 8-like8.2e-6089.06Show/hide
Query:  EERKRDAAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRM
        +E    AAAEGI+YQDEWPY IHFLGY YVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAI  FDW QEV+GLLAAFSDLYR+RM
Subjt:  EERKRDAAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRM

Query:  FQLLVSAYSTISIHDTAQFLGMNEEEAK
        FQLLVSAYSTISIHDTA FLGMNEEEAK
Subjt:  FQLLVSAYSTISIHDTAQFLGMNEEEAK

A0A6J1HVB2 COP9 signalosome complex subunit 8-like1.0e-5784.38Show/hide
Query:  EERKRDAAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRM
        +E    AAAEG+ YQDEWPY IHFLG+LYVDDINSARFLWK+IPSTIKENRPELVAVWKI Q+LWI+DH GVYEAIH FDWCQEVQG+L AFSDLYRRRM
Subjt:  EERKRDAAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRM

Query:  FQLLVSAYSTISIHDTAQFLGMNEEEAK
        FQLLVSAYSTISIHD A FLGMNEEE K
Subjt:  FQLLVSAYSTISIHDTAQFLGMNEEEAK

A0A6J1JQ49 COP9 signalosome complex subunit 8-like4.3e-6190.62Show/hide
Query:  EERKRDAAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRM
        +E    AAAEGIAYQDEWPY IHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRD+GGVYEAI  FDWCQEV+GLLAAFSDLYR+RM
Subjt:  EERKRDAAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRM

Query:  FQLLVSAYSTISIHDTAQFLGMNEEEAK
        FQLLVSAYSTISIHDTA FLGMNEEEAK
Subjt:  FQLLVSAYSTISIHDTAQFLGMNEEEAK

SwissProt top hitse value%identityAlignment
P43255 COP9 signalosome complex subunit 88.4e-4668.33Show/hide
Query:  AAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVSA
        A+EGI Y D+WPYAIH LGY YVDD +SARFLWK IP+ IKE +PE+VA W IGQKLW  D+ GVYEAI  +DW QE + ++AAFSDLY +RMFQLL+SA
Subjt:  AAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVSA

Query:  YSTISIHDTAQFLGMNEEEA
        YSTI+IHD A FLGM E++A
Subjt:  YSTISIHDTAQFLGMNEEEA

Q6GQA6 COP9 signalosome complex subunit 87.2e-2143.56Show/hide
Query:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISIHDTAQFLGMNEEE
        YL  +D+N+AR+LWK IPS IK +  EL  +W++GQK+W RD  G+Y +I  + W + +Q ++ A  D  ++R F L+  AY++IS  D A F+G+  EE
Subjt:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISIHDTAQFLGMNEEE

Query:  A
        A
Subjt:  A

Q6P637 COP9 signalosome complex subunit 82.7e-2044.55Show/hide
Query:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISIHDTAQFLGMNEEE
        YL  +D+N+AR+LWK IP  IK    EL  +W++GQK+W RD  G+Y +I    W + +Q ++ A  D  RRR F L+  AY++IS  D A F+G++ EE
Subjt:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISIHDTAQFLGMNEEE

Query:  A
        A
Subjt:  A

Q7ZUZ0 COP9 signalosome complex subunit 81.2e-2042.57Show/hide
Query:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISIHDTAQFLGMNEEE
        YL  +D+N+AR+LWK IP  IK   PE+ A+W +GQ++W RD  G+Y AI  + W + +  ++ A  +  RRR + L+  AY++IS  D A F+G + EE
Subjt:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISIHDTAQFLGMNEEE

Query:  A
        A
Subjt:  A

Q8VBV7 COP9 signalosome complex subunit 81.4e-1943.56Show/hide
Query:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISIHDTAQFLGMNEEE
        YL  +D+N+AR+LWK IP  IK    EL  +W +GQ++W RD  G+Y  I+   W + VQ ++ A  D  RRR F L+  AY++I   D A F+G+  EE
Subjt:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVSAYSTISIHDTAQFLGMNEEE

Query:  A
        A
Subjt:  A

Arabidopsis top hitse value%identityAlignment
AT4G14110.1 COP9 signalosome, subunit CSN86.0e-4768.33Show/hide
Query:  AAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVSA
        A+EGI Y D+WPYAIH LGY YVDD +SARFLWK IP+ IKE +PE+VA W IGQKLW  D+ GVYEAI  +DW QE + ++AAFSDLY +RMFQLL+SA
Subjt:  AAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLVSA

Query:  YSTISIHDTAQFLGMNEEEA
        YSTI+IHD A FLGM E++A
Subjt:  YSTISIHDTAQFLGMNEEEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGCAGGTTGAAGAAGGAAGAAGAAAGGAAGAAGGAAACGGTTCTTCTGCAGCGGAAAGTATCGCTGGGTGTCGCTCCTCAAGGTAGTCTCGCTGGTTTCATTCA
ACGCAGTATCGCTAGTACAGTGGCCAGGAAGAGCTCGAGGAGGCTTATAATCCACTTAGAGCCGAGACCAATAGTAGCGAGCGTGTCCGGGACGCCTAGCCTACAGAAGA
ATCTCGTCTGGGCCTATCTGGAAGCGAACCTCTGGGATAGTTTAGCAGATCATCGACAGCAGGGGCAATGGTGGCAGACAATGGAAGACGGTCGATGGACGGTGGTAGGC
AGCTGGAGGGAGATTGAAGAGAGAAAGAGAGATGCTGCAGCCGAGGGCATTGCTTATCAGGATGAATGGCCTTATGCGATCCATTTTCTTGGCTATCTTTACGTTGATGA
CATCAATAGTGCTCGATTTCTCTGGAAAGCAATACCTTCCACTATTAAAGAAAACCGACCAGAATTGGTTGCTGTTTGGAAAATTGGTCAAAAGCTATGGATCCGGGACC
ATGGGGGTGTATATGAGGCTATTCATGAATTTGATTGGTGTCAAGAAGTTCAAGGCCTATTAGCTGCATTTTCAGATCTTTACAGAAGGAGAATGTTTCAGTTGCTGGTG
TCTGCTTATTCTACAATAAGCATCCATGACACAGCTCAGTTCTTGGGAATGAATGAGGAAGAAGCCAAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAGCAGGTTGAAGAAGGAAGAAGAAAGGAAGAAGGAAACGGTTCTTCTGCAGCGGAAAGTATCGCTGGGTGTCGCTCCTCAAGGTAGTCTCGCTGGTTTCATTCA
ACGCAGTATCGCTAGTACAGTGGCCAGGAAGAGCTCGAGGAGGCTTATAATCCACTTAGAGCCGAGACCAATAGTAGCGAGCGTGTCCGGGACGCCTAGCCTACAGAAGA
ATCTCGTCTGGGCCTATCTGGAAGCGAACCTCTGGGATAGTTTAGCAGATCATCGACAGCAGGGGCAATGGTGGCAGACAATGGAAGACGGTCGATGGACGGTGGTAGGC
AGCTGGAGGGAGATTGAAGAGAGAAAGAGAGATGCTGCAGCCGAGGGCATTGCTTATCAGGATGAATGGCCTTATGCGATCCATTTTCTTGGCTATCTTTACGTTGATGA
CATCAATAGTGCTCGATTTCTCTGGAAAGCAATACCTTCCACTATTAAAGAAAACCGACCAGAATTGGTTGCTGTTTGGAAAATTGGTCAAAAGCTATGGATCCGGGACC
ATGGGGGTGTATATGAGGCTATTCATGAATTTGATTGGTGTCAAGAAGTTCAAGGCCTATTAGCTGCATTTTCAGATCTTTACAGAAGGAGAATGTTTCAGTTGCTGGTG
TCTGCTTATTCTACAATAAGCATCCATGACACAGCTCAGTTCTTGGGAATGAATGAGGAAGAAGCCAAAGTTTGAGCTTTAATGATCAAGGAGTGGAAGATTGGGTTAGT
CTCATAAACATGTTAGGGAATACCCATCCTTTGCATTCTGAAGGGGGAGAAGATGTCTAAGTAATAATGGAGTGTACTTTTGCAAAAATGCTATGCATGTTCTGACCAAC
GATGCGGGAAATTTTTTGGAGGACCTACTTTGTTATTGGAAGAATAACTACCCCAAGAAGATCGAAGTTCTCCTTTGGACTCTTTGTACTCTTTGTACTGCTACCGAAGG
TGGCCTTGACGCCAGCAAACAACATTCAACATTCAGCCTAACATTTGTAGTCACTGCTGTCCAAACAATAAAAATGCAACACATCCTTCTATTCCATTGCCCTTCATCAT
TGATGTAACACAGCAAGGATGGATTGTTGATGTTGCTTCTCAAATGTTCACTGTGAAGAAACAAGAAATCGTGACGGAGCAGAAGTTAGATTCCAGTAAATTGCAGCGGT
TGACCGAATACGTTTTCCATCTTGAACATTAAACATCAATGCTGCTTTAGTTCTTAGTTTGTTCTATGTCCTTTATAACTAGCCGTGCTTTGTCGATATTTTAATGTTTT
TTTCTTTGGAATTCTTAGGTTTGTTGGCTCCATTTCCCCCAACTGTGAACTGCTAGATTTCTTAGATCTTTTTGCGGTATTAAATAATTGTTTCAGACTCGTTTTTCCAG
AGCGTGTATGTTTGGTTTTGGGCAGACAGTATATTTTGCCCTTTTTTATTTGAGATTGAAAACCAAAAATAGAAACCAGAAAAACGGGTCTATTAGATAAGAGTACTTTA
AAAAAAAATTAGGGAAAAAATGTAGTTTTTTTGTCTTTATCTAAATGTCAGAGTTTGCC
Protein sequenceShow/hide protein sequence
MFSRLKKEEERKKETVLLQRKVSLGVAPQGSLAGFIQRSIASTVARKSSRRLIIHLEPRPIVASVSGTPSLQKNLVWAYLEANLWDSLADHRQQGQWWQTMEDGRWTVVG
SWREIEERKRDAAAEGIAYQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSDLYRRRMFQLLV
SAYSTISIHDTAQFLGMNEEEAKV