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Clc09G15850 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G15850
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:23602264..23603064
RNA-Seq ExpressionClc09G15850
SyntenyClc09G15850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571728.1 hypothetical protein SDJN03_28456, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3475.4Show/hide
Query:  MAKSISPSKNRTFQTS-FSDSEIDVAIQLIHLSEDSDYHDHLTASPTTSSDHKSL---PSATNAAPMEDDGIH-TSRRLATAPPTTSLIEQIFEEIGDGS
        MAKSIS  KNR F+TS FSDSEIDVAIQL+HLSEDSDY  +  AS T+ SD KS+    SATNAA MEDDG H +SRR AT  PTTSLIE IFEEIGD S
Subjt:  MAKSISPSKNRTFQTS-FSDSEIDVAIQLIHLSEDSDYHDHLTASPTTSSDHKSL---PSATNAAPMEDDGIH-TSRRLATAPPTTSLIEQIFEEIGDGS

Query:  NRRGRKRRSRSVYEIYKLTKPVISVK
        NRR RKRRSRSVYEIYKLTKP ISVK
Subjt:  NRRGRKRRSRSVYEIYKLTKPVISVK
KAG6588821.1 hypothetical protein SDJN03_17386, partial [Cucurbita argyrosperma subsp. sororia]5.1e-3270.97Show/hide
Query:  MAKSISPSKNRTFQTS-FSDSEIDVAIQLIHLSEDSDYHDHLTASPTTSSDHKSLPSA--TNAAPMEDDGIHTSRRLATAPPTTSLIEQIFEEIGDGSNR
        MA+S+S S+NR FQTS FSDSEIDVAIQLIHLSEDSDYHD L AS T+ SD KSL SA  +NA  MEDDG +  RR     P    IE I+EEIGDG+NR
Subjt:  MAKSISPSKNRTFQTS-FSDSEIDVAIQLIHLSEDSDYHDHLTASPTTSSDHKSLPSA--TNAAPMEDDGIHTSRRLATAPPTTSLIEQIFEEIGDGSNR

Query:  RGRKRRSRSVYEIYKLTKPVISVK
        R RKRRSRSVYEIYKLTKPVI VK
Subjt:  RGRKRRSRSVYEIYKLTKPVISVK
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATATGTTTGCGTCCGTCTATTACTTACCCTTCCTCTCACTTTCAACGGACGTGCTCTTTGTATAATGGCGAAATCAATTTCCCCCTCCAAAAATCGAACA
TTCCAGACCTCCTTCTCCGATTCCGAAATCGACGTCGCAATTCAGCTTATTCATCTTAGCGAAGACTCCGATTACCACGACCACCTTACCGCCTCCCCCACCACT
TCCAGCGACCACAAATCCCTCCCATCCGCCACCAACGCCGCTCCAATGGAAGACGACGGGATCCACACCAGCCGCCGCCTAGCCACTGCGCCGCCTACAACCTCT
CTGATTGAACAAATCTTCGAAGAAATCGGAGACGGTTCGAATCGGAGAGGGAGGAAGCGCCGGTCGCGTTCGGTTTACGAGATTTACAAATTGACGAAGCCTGTT
ATCTCCGTCAAATGA
mRNA sequenceShow/hide mRNA sequence
CGTGTTTGTATAGCTTTATAAGCAATGGTATATGTTTGCGTCCGTCTATTACTTACCCTTCCTCTCACTTTCAACGGACGTGCTCTTTGTATAATGGCGAAATCA
ATTTCCCCCTCCAAAAATCGAACATTCCAGACCTCCTTCTCCGATTCCGAAATCGACGTCGCAATTCAGCTTATTCATCTTAGCGAAGACTCCGATTACCACGAC
CACCTTACCGCCTCCCCCACCACTTCCAGCGACCACAAATCCCTCCCATCCGCCACCAACGCCGCTCCAATGGAAGACGACGGGATCCACACCAGCCGCCGCCTA
GCCACTGCGCCGCCTACAACCTCTCTGATTGAACAAATCTTCGAAGAAATCGGAGACGGTTCGAATCGGAGAGGGAGGAAGCGCCGGTCGCGTTCGGTTTACGAG
ATTTACAAATTGACGAAGCCTGTTATCTCCGTCAAATGAATTGAAGAGGAATCGCGAAATATGTATTCTCTCTAACTTGATCTTGTTCGCTAATTTTGCTGAATC
CAAACCTAACTCGGTGTTTGTGTGTTTGTGCATATCTGTATGTGTACACCTATGAATCGATTTTAGTATTATTCTGTCTTTTTGCGCCGAATTTAACCCTCTATT
TTGCCTTTTTCGTTGTGTTTTCTGGAAGATATGAAGTGTGTGTGTATATATATATATATATAGTGTGTGTGTGTGTGTGTATGTGATCATTGCTTTGCTTCGATT
TTTTGAAGTGTTTCTTAAGAAGAACCGCAGTAGTAGGTGTTAGTTCTTGAAGAAAGGGGGATTAAT
Protein sequenceShow/hide protein sequence
MVYVCVRLLLTLPLTFNGRALCIMAKSISPSKNRTFQTSFSDSEIDVAIQLIHLSEDSDYHDHLTASPTTSSDHKSLPSATNAAPMEDDGIHTSRRLATAPPTTS
LIEQIFEEIGDGSNRRGRKRRSRSVYEIYKLTKPVISVK