| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0033068.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 4.6e-61 | 51.16 | Show/hide |
Query: KNSIESE--------------FFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFS
KNSIESE FFRAEQKAESVTNYFMRLK+I A L LLLPFSPDVKVQQAQREKM V IFLNGLLPEFGM K QILSDSKIPSLD+AF+
Subjt: KNSIESE--------------FFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFS
Query: RVLRIESSQSN--------------------------------------SQEIVCNYCRKPGHLKRDCRKLLYKN-QRSQQAQIASTSDMTEKSVTTFTE
RVLRIESS + S +IVCNYC KPGH+KRDCRKLLYKN Q+SQ AQIAST D+ E SVT +
Subjt: RVLRIESSQSN--------------------------------------SQEIVCNYCRKPGHLKRDCRKLLYKN-QRSQQAQIASTSDMTEKSVTTFTE
Query: EFAKFQ--------------------------------------ATKTRCKHHLHLILLP------PLLTQDRMMKKIIGRGYESGGLYLFDHQIPKVVA
E+ KFQ + T + L P P +T DR+MKKIIGRGYESGGLYLFDHQ+ + VA
Subjt: EFAKFQ--------------------------------------ATKTRCKHHLHLILLP------PLLTQDRMMKKIIGRGYESGGLYLFDHQIPKVVA
Query: C
C
Subjt: C
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| KAA0054107.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-44 | 52.78 | Show/hide |
Query: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESSQSNSQEIVCNYC
+FF EQKAESVTNYFMRLK+I AEL LLLPFSPDVKVQQAQREKM V+IFLNGLLPEFGMAK QILSDSKIPSLD+AF+RVLRIESS +
Subjt: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESSQSNSQEIVCNYC
Query: RKPGHLKRDCRKLLYKNQ-----RSQQAQIASTSDMTEKSVTTFTEEFAKFQATKTRCKHHLHLILLPPLLTQ-------------DRMMKKIIGRGYES
+ + L+ KN R+ IAST + E SVT + +AKFQ + + + P + DR+ KKIIG+G+ES
Subjt: RKPGHLKRDCRKLLYKNQ-----RSQQAQIASTSDMTEKSVTTFTEEFAKFQATKTRCKHHLHLILLPPLLTQ-------------DRMMKKIIGRGYES
Query: GGLYLFDHQIPKVVAC
GLYLF+HQ+ + VAC
Subjt: GGLYLFDHQIPKVVAC
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| TYK29397.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.9e-44 | 52.31 | Show/hide |
Query: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESSQSNSQEIVCNYC
+FF EQK ESVTNYFMRLK+I AEL LLLPFSPDVKVQQAQREKM V+IFLNGLLPEFGMAK QILSDSKIPSLD+AF+RVLRIESS +
Subjt: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESSQSNSQEIVCNYC
Query: RKPGHLKRDCRKLLYKNQ-----RSQQAQIASTSDMTEKSVTTFTEEFAKFQATKTRCKHHLHLILLPPLLTQ-------------DRMMKKIIGRGYES
+ + L+ KN R+ IAST + E SVT + +AKFQ + + + P + DR+ KKIIG+G+ES
Subjt: RKPGHLKRDCRKLLYKNQ-----RSQQAQIASTSDMTEKSVTTFTEEFAKFQATKTRCKHHLHLILLPPLLTQ-------------DRMMKKIIGRGYES
Query: GGLYLFDHQIPKVVAC
GLYLF+HQ+ + VAC
Subjt: GGLYLFDHQIPKVVAC
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| TYK30615.1 Copia protein [Cucumis melo var. makuwa] | 8.1e-42 | 46.69 | Show/hide |
Query: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESS------------
+F RAEQKAESVTNYFMRLK+I AEL LLLPFSPDV K QILSDSKIPSLD AF+RVLR ESS
Subjt: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESS------------
Query: --------------------------QSNSQEIVCNYCRKPGHLKRDCRKLLYKN-QRSQQAQIASTSDMTEKSVTTFTEEFAKFQ--------------
+ +S EIVCNYCRKP H KRDCRKLLYKN Q+SQ AQIAST D+ E S+T E AK Q
Subjt: --------------------------QSNSQEIVCNYCRKPGHLKRDCRKLLYKN-QRSQQAQIASTSDMTEKSVTTFTEEFAKFQ--------------
Query: ------ATKTRCKHHLHLILLPPLLTQDRMMKKIIGRGYESGGLYLFDHQIPKVVAC
T+C LL DR+ KKIIG+GYESGGLYLFDHQ+ + VAC
Subjt: ------ATKTRCKHHLHLILLPPLLTQDRMMKKIIGRGYESGGLYLFDHQIPKVVAC
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| XP_031744753.1 uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus] | 1.1e-57 | 44.73 | Show/hide |
Query: NFIFRSKNSIE------SEFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRV
+F++ K + +FFRAEQKAESVT+YFMRLK+I AEL LLLPFSPDVKVQQ QREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLD+AF+RV
Subjt: NFIFRSKNSIE------SEFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRV
Query: LRIESSQSN-------------------------------SQEIVCNYCRKPGHLKRDCRKLLYKN-QRSQQAQIASTSDMTEKSVTTFTEEFAKFQ---
LRIESS ++ S EIVCNYCRKPGH+KRDCRKLLYKN QRSQ AQIAST D+ E SVT +EFAKFQ
Subjt: LRIESSQSN-------------------------------SQEIVCNYCRKPGHLKRDCRKLLYKN-QRSQQAQIASTSDMTEKSVTTFTEEFAKFQ---
Query: ---------------------------ATK----------------------------------------------------------------------
+TK
Subjt: ---------------------------ATK----------------------------------------------------------------------
Query: TRCKHHLHLILL---PPLLTQDRMMKKIIGRGYESGGLYLFDHQIPKVVAC
++ H L+ +++ L QDR+ KKIIGRGYESGGLYLFDHQ+ + VAC
Subjt: TRCKHHLHLILL---PPLLTQDRMMKKIIGRGYESGGLYLFDHQIPKVVAC
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SR90 Gag-pol polyprotein | 2.2e-61 | 51.16 | Show/hide |
Query: KNSIESE--------------FFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFS
KNSIESE FFRAEQKAESVTNYFMRLK+I A L LLLPFSPDVKVQQAQREKM V IFLNGLLPEFGM K QILSDSKIPSLD+AF+
Subjt: KNSIESE--------------FFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFS
Query: RVLRIESSQSN--------------------------------------SQEIVCNYCRKPGHLKRDCRKLLYKN-QRSQQAQIASTSDMTEKSVTTFTE
RVLRIESS + S +IVCNYC KPGH+KRDCRKLLYKN Q+SQ AQIAST D+ E SVT +
Subjt: RVLRIESSQSN--------------------------------------SQEIVCNYCRKPGHLKRDCRKLLYKN-QRSQQAQIASTSDMTEKSVTTFTE
Query: EFAKFQ--------------------------------------ATKTRCKHHLHLILLP------PLLTQDRMMKKIIGRGYESGGLYLFDHQIPKVVA
E+ KFQ + T + L P P +T DR+MKKIIGRGYESGGLYLFDHQ+ + VA
Subjt: EFAKFQ--------------------------------------ATKTRCKHHLHLILLP------PLLTQDRMMKKIIGRGYESGGLYLFDHQIPKVVA
Query: C
C
Subjt: C
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| A0A5A7T406 Copia protein | 3.3e-41 | 46.3 | Show/hide |
Query: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESS------------
+F RAEQKAESVTNYFMRLK+I AEL LLLPFSPDV K QILSDSKIPSLD AF+RVL ESS
Subjt: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESS------------
Query: --------------------------QSNSQEIVCNYCRKPGHLKRDCRKLLYKN-QRSQQAQIASTSDMTEKSVTTFTEEFAKFQ--------------
+ +S EIVCNYCRKP H KRDCRKLLYKN Q+SQ AQIAST D+ E S+T E AK Q
Subjt: --------------------------QSNSQEIVCNYCRKPGHLKRDCRKLLYKN-QRSQQAQIASTSDMTEKSVTTFTEEFAKFQ--------------
Query: ------ATKTRCKHHLHLILLPPLLTQDRMMKKIIGRGYESGGLYLFDHQIPKVVAC
T+C LL DR+ KKIIG+GYESGGLYLFDHQ+ + VAC
Subjt: ------ATKTRCKHHLHLILLPPLLTQDRMMKKIIGRGYESGGLYLFDHQIPKVVAC
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| A0A5A7UHS1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.5e-45 | 52.78 | Show/hide |
Query: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESSQSNSQEIVCNYC
+FF EQKAESVTNYFMRLK+I AEL LLLPFSPDVKVQQAQREKM V+IFLNGLLPEFGMAK QILSDSKIPSLD+AF+RVLRIESS +
Subjt: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESSQSNSQEIVCNYC
Query: RKPGHLKRDCRKLLYKNQ-----RSQQAQIASTSDMTEKSVTTFTEEFAKFQATKTRCKHHLHLILLPPLLTQ-------------DRMMKKIIGRGYES
+ + L+ KN R+ IAST + E SVT + +AKFQ + + + P + DR+ KKIIG+G+ES
Subjt: RKPGHLKRDCRKLLYKNQ-----RSQQAQIASTSDMTEKSVTTFTEEFAKFQATKTRCKHHLHLILLPPLLTQ-------------DRMMKKIIGRGYES
Query: GGLYLFDHQIPKVVAC
GLYLF+HQ+ + VAC
Subjt: GGLYLFDHQIPKVVAC
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| A0A5D3DZU1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.9e-44 | 52.31 | Show/hide |
Query: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESSQSNSQEIVCNYC
+FF EQK ESVTNYFMRLK+I AEL LLLPFSPDVKVQQAQREKM V+IFLNGLLPEFGMAK QILSDSKIPSLD+AF+RVLRIESS +
Subjt: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESSQSNSQEIVCNYC
Query: RKPGHLKRDCRKLLYKNQ-----RSQQAQIASTSDMTEKSVTTFTEEFAKFQATKTRCKHHLHLILLPPLLTQ-------------DRMMKKIIGRGYES
+ + L+ KN R+ IAST + E SVT + +AKFQ + + + P + DR+ KKIIG+G+ES
Subjt: RKPGHLKRDCRKLLYKNQ-----RSQQAQIASTSDMTEKSVTTFTEEFAKFQATKTRCKHHLHLILLPPLLTQ-------------DRMMKKIIGRGYES
Query: GGLYLFDHQIPKVVAC
GLYLF+HQ+ + VAC
Subjt: GGLYLFDHQIPKVVAC
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| A0A5D3E5M8 Copia protein | 3.9e-42 | 46.69 | Show/hide |
Query: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESS------------
+F RAEQKAESVTNYFMRLK+I AEL LLLPFSPDV K QILSDSKIPSLD AF+RVLR ESS
Subjt: EFFRAEQKAESVTNYFMRLKRIAAELTLLLPFSPDVKVQQAQREKMAVMIFLNGLLPEFGMAKTQILSDSKIPSLDEAFSRVLRIESS------------
Query: --------------------------QSNSQEIVCNYCRKPGHLKRDCRKLLYKN-QRSQQAQIASTSDMTEKSVTTFTEEFAKFQ--------------
+ +S EIVCNYCRKP H KRDCRKLLYKN Q+SQ AQIAST D+ E S+T E AK Q
Subjt: --------------------------QSNSQEIVCNYCRKPGHLKRDCRKLLYKN-QRSQQAQIASTSDMTEKSVTTFTEEFAKFQ--------------
Query: ------ATKTRCKHHLHLILLPPLLTQDRMMKKIIGRGYESGGLYLFDHQIPKVVAC
T+C LL DR+ KKIIG+GYESGGLYLFDHQ+ + VAC
Subjt: ------ATKTRCKHHLHLILLPPLLTQDRMMKKIIGRGYESGGLYLFDHQIPKVVAC
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