| GenBank top hits | e value | %identity | Alignment |
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| KAA0036866.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.7e-76 | 37.3 | Show/hide |
Query: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYYCRDAFKKGLGCVLMQHGKVVAYAS-------------------------------------
+VSK GVSVDPAKIEA+T W+RP+T+SEVRSFLGLA YY RDA KKGLG VLMQ GKVVAY S
Subjt: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYYCRDAFKKGLGCVLMQHGKVVAYAS-------------------------------------
Query: -------------------------------------------------------------------------QIAVAIGEVTSQLVQLSVQPTLRQRII
+IAV++G VT QL QL+VQPTLRQRII
Subjt: -------------------------------------------------------------------------QIAVAIGEVTSQLVQLSVQPTLRQRII
Query: DAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVVEHVSKCLVCQQVKA
DAQ DS+VK E EAHSS FS+HPGSTKMYQDLK YWW NMKREV E VS+CLVCQQVKA
Subjt: DAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVVEHVSKCLVCQQVKA
Query: LRQKPIGLLQSLKVPGW-----------------------------------------------------------------------------------
RQKP GLLQ L +P W
Subjt: LRQKPIGLLQSLKVPGW-----------------------------------------------------------------------------------
Query: -------------------------NYQTKIGTRPFEGLYGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR-------------------------
+YQ IG PFE LYGK CR+PVC +VGE++L+GPELVQ TNETIQKIR
Subjt: -------------------------NYQTKIGTRPFEGLYGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR-------------------------
Query: -------VVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
V PM+GVLRF +KGKLSPRF GPFEILE+VGPVAYRLAL P LSTVH+VF+VSMLR
Subjt: -------VVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
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| KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa] | 6.7e-78 | 45.12 | Show/hide |
Query: MVSKGGVSVDPAKIEAITSWSRPATISE---------VRSFLGLASYYCRDAFKKGLGCVLMQHGK--VVAYA------------------------SQI
+VSK GV VDPAKIEA+TSW RP+T+SE V G Y DA KKGLGCVLMQ GK VVA A + I
Subjt: MVSKGGVSVDPAKIEAITSWSRPATISE---------VRSFLGLASYYCRDAFKKGLGCVLMQHGK--VVAYA------------------------SQI
Query: AVAIGEVTSQLVQLSVQPTLRQRIIDAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHY
AV++G VTSQL QL+VQPTLRQ+IIDAQ DS VK E EAHSS FS+HPGSTKMYQDLK
Subjt: AVAIGEVTSQLVQLSVQPTLRQRIIDAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHY
Query: YWWHNMKREVVEHVSKCLVCQQVKALRQKPIGLLQSLKVPGW----------------------------------------------------------
YWW NMKR+V E VSKCLVC+QVKA RQKP GLLQ L VP W
Subjt: YWWHNMKREVVEHVSKCLVCQQVKALRQKPIGLLQSLKVPGW----------------------------------------------------------
Query: ---NYQTKIGTRPFEGLYGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR--------------------------------VVPMKGVLRFGRKGK
++Q IG PFE LYGK CR+PVCW +VGE++L+GPELVQ TNE IQKIR V PMKGVLRF R GK
Subjt: ---NYQTKIGTRPFEGLYGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR--------------------------------VVPMKGVLRFGRKGK
Query: LSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
LSPRF PFEILE++GPVAYRLAL P LS VH+VF+VSMLR
Subjt: LSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
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| KAA0046133.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.1e-75 | 40.04 | Show/hide |
Query: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYYCR----------------------------------------------------------D
+VS GVSVDPAKIE +T+W RP+T+SE+RSFLGLA YY R D
Subjt: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYYCR----------------------------------------------------------D
Query: AFKKGLGCVLMQHGKVVAYAS------------------------------------------------------------------QIAVAIGEVTSQL
A KKGLGCVLMQ GKVVAYAS +IAVA+GEVTSQ
Subjt: AFKKGLGCVLMQHGKVVAYAS------------------------------------------------------------------QIAVAIGEVTSQL
Query: VQLSVQPTLRQRIIDAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVV
QLSVQPTLRQRII AQ +DS VK E +EAHSS F++HP STKMY+DL+ YWW NMKREV
Subjt: VQLSVQPTLRQRIIDAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVV
Query: EHVSKCLVCQQVKALRQKPIGLLQSLKVPGW-----------NYQTK---------------------------------------IGTRPFEGLYGKSC
+ +S+CLVCQQVKA +Q P GLLQ L VPG Y T+ IG PFE LYGK C
Subjt: EHVSKCLVCQQVKALRQKPIGLLQSLKVPGW-----------NYQTK---------------------------------------IGTRPFEGLYGKSC
Query: RTPVCWDDVGERKLLGPELVQLTNETIQKIRVVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
R+ VCW VGE+++LGP+LVQ TN IQKIR PMKGV+RF +KGKL PRF G FEILE++GPVAYRLAL P S VH+VF+VSMLR
Subjt: RTPVCWDDVGERKLLGPELVQLTNETIQKIRVVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
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| KAA0047212.1 pol protein [Cucumis melo var. makuwa] | 6.3e-76 | 40.64 | Show/hide |
Query: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYYC--RDAFKKGLGCVLMQHGKVVAYASQ----------------------------------
+VSK GV VDPAKIE +TSW RP T+SEVRSFLGLA + DA KKGLGCVLMQ GKVVAYAS+
Subjt: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYYC--RDAFKKGLGCVLMQHGKVVAYASQ----------------------------------
Query: --------------------------------IAVAIGEVTSQLVQLSVQPTLRQRIIDAQ--------------------------------------Q
IAV +G VTSQL QL+VQPTLRQ+IIDAQ
Subjt: --------------------------------IAVAIGEVTSQLVQLSVQPTLRQRIIDAQ--------------------------------------Q
Query: DSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVVEHVSKCLVCQQVKALRQKPIGLLQSLKVPGW-------------------------
DS VK E EAHS FS+H GSTKMYQDLK YWW NMKREV E VSKCLVCQQVKA RQKP GLLQ L VP W
Subjt: DSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVVEHVSKCLVCQQVKALRQKPIGLLQSLKVPGW-------------------------
Query: --------------------------------------------------------------------------------------NYQTKIGTRPFEGL
++Q IG PFE L
Subjt: --------------------------------------------------------------------------------------NYQTKIGTRPFEGL
Query: YGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR-----VVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
Y K CR+PVCW +VGE++L+GPELVQ TNE IQKIR V PMKGVLRF R+GKLS RF GPFEILE++GPVAYRL L P LS V++VF+VSMLR
Subjt: YGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR-----VVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
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| TYK21928.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.2e-72 | 38.54 | Show/hide |
Query: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLAS-------------------------------------YYCRDAFKKGLGCVLMQHGKVVAYAS
+VSK GVS+DPAKIEA+TSW RP+T+SEVRSFLGLA DA KKGLGCVLMQ KVVAYAS
Subjt: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLAS-------------------------------------YYCRDAFKKGLGCVLMQHGKVVAYAS
Query: ---------------QIAVAI-----------GE---------------------------------------------------VTSQLVQLSVQPTLR
++A + GE ++ +L QL+VQPTLR
Subjt: ---------------QIAVAI-----------GE---------------------------------------------------VTSQLVQLSVQPTLR
Query: QRIIDAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVVEHVSKCLVCQ
Q+IIDA+ DS VK E EAHSS FS+HPGSTKMYQDLK YWW NMKREV E VSKC VCQ
Subjt: QRIIDAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVVEHVSKCLVCQ
Query: QVKALRQKPIGLLQSLKVPGW------------------------------------------------------------NYQTKIGTRPFEGLYGKSC
QVKA RQKP GLLQ L VP W ++Q IG PFE LYGK C
Subjt: QVKALRQKPIGLLQSLKVPGW------------------------------------------------------------NYQTKIGTRPFEGLYGKSC
Query: RTPVCWDDVGERKLLGPELVQLTNETIQKIR--------------------------------VVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRL
R+PVCW +VGE++L+ PELVQ TNE I KIR V PMKGVLRF R+GKLSPRF GPFEILE++GPVAYRL
Subjt: RTPVCWDDVGERKLLGPELVQLTNETIQKIR--------------------------------VVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRL
Query: ALAPFLSTVHNVFYVSMLR
AL P LSTVH+VF+VSMLR
Subjt: ALAPFLSTVHNVFYVSMLR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T407 Reverse transcriptase | 1.8e-76 | 37.3 | Show/hide |
Query: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYYCRDAFKKGLGCVLMQHGKVVAYAS-------------------------------------
+VSK GVSVDPAKIEA+T W+RP+T+SEVRSFLGLA YY RDA KKGLG VLMQ GKVVAY S
Subjt: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYYCRDAFKKGLGCVLMQHGKVVAYAS-------------------------------------
Query: -------------------------------------------------------------------------QIAVAIGEVTSQLVQLSVQPTLRQRII
+IAV++G VT QL QL+VQPTLRQRII
Subjt: -------------------------------------------------------------------------QIAVAIGEVTSQLVQLSVQPTLRQRII
Query: DAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVVEHVSKCLVCQQVKA
DAQ DS+VK E EAHSS FS+HPGSTKMYQDLK YWW NMKREV E VS+CLVCQQVKA
Subjt: DAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVVEHVSKCLVCQQVKA
Query: LRQKPIGLLQSLKVPGW-----------------------------------------------------------------------------------
RQKP GLLQ L +P W
Subjt: LRQKPIGLLQSLKVPGW-----------------------------------------------------------------------------------
Query: -------------------------NYQTKIGTRPFEGLYGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR-------------------------
+YQ IG PFE LYGK CR+PVC +VGE++L+GPELVQ TNETIQKIR
Subjt: -------------------------NYQTKIGTRPFEGLYGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR-------------------------
Query: -------VVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
V PM+GVLRF +KGKLSPRF GPFEILE+VGPVAYRLAL P LSTVH+VF+VSMLR
Subjt: -------VVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
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| A0A5A7TCQ5 Reverse transcriptase | 2.0e-72 | 35.67 | Show/hide |
Query: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYY-----------------------------CRDAF---------------------------
+VSK GVSVD AKIEA+T W+RP+T++EVRSFLGLA YY C D+F
Subjt: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYY-----------------------------CRDAF---------------------------
Query: --KKGLGCVLMQHGKVVAYAS-------------------------------------------------------------------------------
KKGLGCVLMQ GKVVAYAS
Subjt: --KKGLGCVLMQHGKVVAYAS-------------------------------------------------------------------------------
Query: -------------------------------QIAVAIGEVTSQLVQLSVQPTLRQRIIDAQ--------------------------------------Q
+IAV++G VT QL QL+VQPTLRQRIIDAQ
Subjt: -------------------------------QIAVAIGEVTSQLVQLSVQPTLRQRIIDAQ--------------------------------------Q
Query: DSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVVEHVSKCLVCQQVKALRQKPIGLLQSLKVPGW-------------------------
DS VK E EAHSS FS+HPGSTKMYQDLK YWW NMKREV E VS+CLVCQQVKA RQKP GLLQ L +P W
Subjt: DSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVVEHVSKCLVCQQVKALRQKPIGLLQSLKVPGW-------------------------
Query: ------------------------------------------------NYQTKIGTRPFEGLYGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR--
+YQ IG PFE LYGK CR+PVCW +VGE++L+ PELVQ TNE IQKIR
Subjt: ------------------------------------------------NYQTKIGTRPFEGLYGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR--
Query: ------------------------------VVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
V PM+GVLRF RKGKLSPRF GPFEILE++GPVAYRLAL P LSTVH+VF VSMLR
Subjt: ------------------------------VVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
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| A0A5A7TM80 Putative Retrotransposon protein | 3.2e-78 | 45.12 | Show/hide |
Query: MVSKGGVSVDPAKIEAITSWSRPATISE---------VRSFLGLASYYCRDAFKKGLGCVLMQHGK--VVAYA------------------------SQI
+VSK GV VDPAKIEA+TSW RP+T+SE V G Y DA KKGLGCVLMQ GK VVA A + I
Subjt: MVSKGGVSVDPAKIEAITSWSRPATISE---------VRSFLGLASYYCRDAFKKGLGCVLMQHGK--VVAYA------------------------SQI
Query: AVAIGEVTSQLVQLSVQPTLRQRIIDAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHY
AV++G VTSQL QL+VQPTLRQ+IIDAQ DS VK E EAHSS FS+HPGSTKMYQDLK
Subjt: AVAIGEVTSQLVQLSVQPTLRQRIIDAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHY
Query: YWWHNMKREVVEHVSKCLVCQQVKALRQKPIGLLQSLKVPGW----------------------------------------------------------
YWW NMKR+V E VSKCLVC+QVKA RQKP GLLQ L VP W
Subjt: YWWHNMKREVVEHVSKCLVCQQVKALRQKPIGLLQSLKVPGW----------------------------------------------------------
Query: ---NYQTKIGTRPFEGLYGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR--------------------------------VVPMKGVLRFGRKGK
++Q IG PFE LYGK CR+PVCW +VGE++L+GPELVQ TNE IQKIR V PMKGVLRF R GK
Subjt: ---NYQTKIGTRPFEGLYGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR--------------------------------VVPMKGVLRFGRKGK
Query: LSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
LSPRF PFEILE++GPVAYRLAL P LS VH+VF+VSMLR
Subjt: LSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
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| A0A5A7TRD6 Ty3-gypsy retrotransposon protein | 2.0e-75 | 40.04 | Show/hide |
Query: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYYCR----------------------------------------------------------D
+VS GVSVDPAKIE +T+W RP+T+SE+RSFLGLA YY R D
Subjt: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYYCR----------------------------------------------------------D
Query: AFKKGLGCVLMQHGKVVAYAS------------------------------------------------------------------QIAVAIGEVTSQL
A KKGLGCVLMQ GKVVAYAS +IAVA+GEVTSQ
Subjt: AFKKGLGCVLMQHGKVVAYAS------------------------------------------------------------------QIAVAIGEVTSQL
Query: VQLSVQPTLRQRIIDAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVV
QLSVQPTLRQRII AQ +DS VK E +EAHSS F++HP STKMY+DL+ YWW NMKREV
Subjt: VQLSVQPTLRQRIIDAQ--------------------------------------QDSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVV
Query: EHVSKCLVCQQVKALRQKPIGLLQSLKVPGW-----------NYQTK---------------------------------------IGTRPFEGLYGKSC
+ +S+CLVCQQVKA +Q P GLLQ L VPG Y T+ IG PFE LYGK C
Subjt: EHVSKCLVCQQVKALRQKPIGLLQSLKVPGW-----------NYQTK---------------------------------------IGTRPFEGLYGKSC
Query: RTPVCWDDVGERKLLGPELVQLTNETIQKIRVVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
R+ VCW VGE+++LGP+LVQ TN IQKIR PMKGV+RF +KGKL PRF G FEILE++GPVAYRLAL P S VH+VF+VSMLR
Subjt: RTPVCWDDVGERKLLGPELVQLTNETIQKIRVVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
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| A0A5A7TUS7 Pol protein | 3.0e-76 | 40.64 | Show/hide |
Query: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYYC--RDAFKKGLGCVLMQHGKVVAYASQ----------------------------------
+VSK GV VDPAKIE +TSW RP T+SEVRSFLGLA + DA KKGLGCVLMQ GKVVAYAS+
Subjt: MVSKGGVSVDPAKIEAITSWSRPATISEVRSFLGLASYYC--RDAFKKGLGCVLMQHGKVVAYASQ----------------------------------
Query: --------------------------------IAVAIGEVTSQLVQLSVQPTLRQRIIDAQ--------------------------------------Q
IAV +G VTSQL QL+VQPTLRQ+IIDAQ
Subjt: --------------------------------IAVAIGEVTSQLVQLSVQPTLRQRIIDAQ--------------------------------------Q
Query: DSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVVEHVSKCLVCQQVKALRQKPIGLLQSLKVPGW-------------------------
DS VK E EAHS FS+H GSTKMYQDLK YWW NMKREV E VSKCLVCQQVKA RQKP GLLQ L VP W
Subjt: DSDVKNEFPMEAHSSSFSVHPGSTKMYQDLKHYYWWHNMKREVVEHVSKCLVCQQVKALRQKPIGLLQSLKVPGW-------------------------
Query: --------------------------------------------------------------------------------------NYQTKIGTRPFEGL
++Q IG PFE L
Subjt: --------------------------------------------------------------------------------------NYQTKIGTRPFEGL
Query: YGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR-----VVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
Y K CR+PVCW +VGE++L+GPELVQ TNE IQKIR V PMKGVLRF R+GKLS RF GPFEILE++GPVAYRL L P LS V++VF+VSMLR
Subjt: YGKSCRTPVCWDDVGERKLLGPELVQLTNETIQKIR-----VVPMKGVLRFGRKGKLSPRFSGPFEILEQVGPVAYRLALAPFLSTVHNVFYVSMLR
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