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Clc09G17105 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G17105
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCytochrome c biogenesis FN
Genome locationClcChr09:27261483..27265927
RNA-Seq ExpressionClc09G17105
SyntenyClc09G17105
Gene Ontology termsGO:0015886 - heme transport (biological process)
GO:0017004 - cytochrome complex assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015232 - heme transporter activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR003567 - Cytochrome c-type biogenesis protein
IPR003569 - Probable cytochrome c biosynthesis protein, plants


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ATW72861.1 ccmFN [Solanum commersonii]3.4e-4984.5Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMPRVLAT RIHSVILPLLHSWTSFLNIVTF CCVSGTFSIR GLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG
        ARSTLVH  L    +  K   +VF+ C G
Subjt:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG

QEM01536.1 cytochrome C biogenesis factor N [Solanum tuberosum]3.4e-4984.5Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMPRVLAT RIHSVILPLLHSWTSFLNIVTF CCVSGTFSIR GLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG
        ARSTLVH  L    +  K   +VF+ C G
Subjt:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG

YP_009049706.1 cytochrome c maturation protein CcmFN [Capsicum annuum]3.4e-4984.5Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMPRVLAT RIHSVILPLLHSWTSFLNIVTF CCVSGTFSIR GLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG
        ARSTLVH  L    +  K   +VF+ C G
Subjt:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG

YP_009430473.1 cytochrome c maturation protein CcmFN [Solanum lycopersicum]3.4e-4984.5Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMPRVLAT RIHSVILPLLHSWTSFLNIVTF CCVSGTFSIR GLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG
        ARSTLVH  L    +  K   +VF+ C G
Subjt:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG

YP_009682049.1 cytochrome c biogenesis FN [Physochlaina orientalis]3.4e-4984.5Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMPRVLAT RIHSVILPLLHSWTSFLNIVTF CCVSGTFSIR GLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG
        ARSTLVH  L    +  K   +VF+ C G
Subjt:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG

TrEMBL top hitse value%identityAlignment
A0A0C5B9X0 Cytochrome c biogenesis FN1.7e-4984.5Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMPRVLAT RIHSVILPLLHSWTSFLNIVTF CCVSGTFSIR GLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG
        ARSTLVH  L    +  K   +VF+ C G
Subjt:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG

A0A290WKZ9 CcmFn1.7e-4984.5Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMPRVLAT RIHSVILPLLHSWTSFLNIVTF CCVSGTFSIR GLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG
        ARSTLVH  L    +  K   +VF+ C G
Subjt:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG

A0A5C1H778 Cytochrome C biogenesis factor N1.7e-4984.5Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMPRVLAT RIHSVILPLLHSWTSFLNIVTF CCVSGTFSIR GLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG
        ARSTLVH  L    +  K   +VF+ C G
Subjt:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG

A0A7S9H4F1 Cytochrome c biogenesis factor N1.7e-4984.5Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMPRVLAT RIHSVILPLLHSWTSFLNIVTF CCVSGTFSIR GLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG
        ARSTLVH  L    +  K   +VF+ C G
Subjt:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG

A0A7S9H578 Cytochrome c biogenesis factor N1.7e-4984.5Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMPRVLAT RIHSVILPLLHSWTSFLNIVTF CCVSGTFSIR GLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG
        ARSTLVH  L    +  K   +VF+ C G
Subjt:  ARSTLVHLCLHDYLKNVKPHEVVFEKCHG

SwissProt top hitse value%identityAlignment
P36180 Probable cytochrome c biosynthesis protein9.2e-2971.91Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQAS
        ENASFMP VLAT  IHSVILP L+ WT FLN+VTF CC+ GTF +R GLLA VHSFATD TRGIFLW FFLL+T IS + F +MKQQ+S
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQAS

Q04647 Probable cytochrome c biosynthesis protein2.1e-4993.52Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMPRVLAT RIHSVILPLLHSWTSFLNIVT  CCVSGT SIR GLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMV+
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHL
        ARSTLVHL
Subjt:  ARSTLVHL

Q04648 Probable cytochrome c biosynthesis protein3.5e-4487.96Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMP VLAT  IHSVILPLLHS T  +NIVTF CCV GTFSIR GLLA VHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTY+KEMVV
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHL
        ARSTLVHL
Subjt:  ARSTLVHL

Q33884 Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 2 (Fragment)2.7e-4487.96Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMP VLAT  IHSVILP LHSWT FLNIVTF CCV GTFSIR GLLA VHSFATDDTRGIFLW FFLLMTGI MILF QMKQQASV RTYKKEMVV
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHL
        ARSTLVHL
Subjt:  ARSTLVHL

Q9I3N2 Cytochrome c-type biogenesis protein CcmF7.8e-1245.35Show/hide
Query:  ENASFMPRVLATTRIHSVILP----LLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFS
        ENASFMP ++ T  IHS+ +     +  SWT  L I  FS  + GTF +R G+L  VH+FA+D  RG+F+  F LL+ G S+ LF+
Subjt:  ENASFMPRVLATTRIHSVILP----LLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFS

Arabidopsis top hitse value%identityAlignment
AT2G07768.1 Cytochrome C assembly protein1.1e-5092.73Show/hide
Query:  SEENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEM
        S  NASFMPRVLAT RIHSVILPLLHSWTSFLNIVTF CCVSGTFSIR GLLAPVHSFATDDTRGIFLW FFLLMTGISMILF QMKQQASV RTYKKEM
Subjt:  SEENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEM

Query:  VVARSTLVHL
        VVARSTLVHL
Subjt:  VVARSTLVHL

ATMG00960.1 Cytochrome C assembly protein6.7e-5194.44Show/hide
Query:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV
        ENASFMPRVLAT RIHSVILPLLHSWTSFLNIVTF CCVSGTFSIR GLLAPVHSFATDDTRGIFLW FFLLMTGISMILF QMKQQASV RTYKKEMVV
Subjt:  ENASFMPRVLATTRIHSVILPLLHSWTSFLNIVTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV

Query:  ARSTLVHL
        ARSTLVHL
Subjt:  ARSTLVHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGCGAAGAATACATATTAAAACAGAAAGTAAAATACAGGATGAAAAAGCAGGCAAGAACAACTGGTCTGCAAAAATAAGAGGCAAAGAACAACTCATGAGCAA
GGACATCTCTATAGGTGCGACCGTGGTGACAGACGACTTTGTAGGTGTAGTGAACGATTCTGTAAGTGCGACGATGGCGATGGACGAGCAAGATGATGGTGTGGTTGGTG
ACTTTAAGAGTGAGGAAAATGCTTCTTTTATGCCTCGGGTATTAGCCACAACTCGTATTCATTCAGTCATTTTACCCCTTCTTCATTCTTGGACCTCATTTCTGAATATT
GTGACTTTTTCATGCTGTGTCTCAGGAACCTTTTCAATACGGTTCGGATTGCTAGCTCCCGTTCATAGTTTTGCTACAGATGATACACGAGGAATCTTTTTATGGCGGTT
CTTCCTTCTAATGACCGGCATATCAATGATTCTTTTCTCCCAAATGAAGCAGCAGGCATCGGTCTGTAGAACCTATAAGAAAGAGATGGTTGTGGCACGAAGTACTCTTG
TGCACCTATGTCTACATGACTATTTGAAAAATGTAAAACCGCACGAGGTAGTATTTGAAAAATGTCATGGTAATCCTCAGCGAACTCATCATCATCTACATGACTATTTG
AAAAATGTAAAACCATACGAGGGGATCTCTGGTTCGAGTTTGCTAAGGCTTCATGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTGCGAAGAATACATATTAAAACAGAAAGTAAAATACAGGATGAAAAAGCAGGCAAGAACAACTGGTCTGCAAAAATAAGAGGCAAAGAACAACTCATGAGCAA
GGACATCTCTATAGGTGCGACCGTGGTGACAGACGACTTTGTAGGTGTAGTGAACGATTCTGTAAGTGCGACGATGGCGATGGACGAGCAAGATGATGGTGTGGTTGGTG
ACTTTAAGAGTGAGGAAAATGCTTCTTTTATGCCTCGGGTATTAGCCACAACTCGTATTCATTCAGTCATTTTACCCCTTCTTCATTCTTGGACCTCATTTCTGAATATT
GTGACTTTTTCATGCTGTGTCTCAGGAACCTTTTCAATACGGTTCGGATTGCTAGCTCCCGTTCATAGTTTTGCTACAGATGATACACGAGGAATCTTTTTATGGCGGTT
CTTCCTTCTAATGACCGGCATATCAATGATTCTTTTCTCCCAAATGAAGCAGCAGGCATCGGTCTGTAGAACCTATAAGAAAGAGATGGTTGTGGCACGAAGTACTCTTG
TGCACCTATGTCTACATGACTATTTGAAAAATGTAAAACCGCACGAGGTAGTATTTGAAAAATGTCATGGTAATCCTCAGCGAACTCATCATCATCTACATGACTATTTG
AAAAATGTAAAACCATACGAGGGGATCTCTGGTTCGAGTTTGCTAAGGCTTCATGAATAG
Protein sequenceShow/hide protein sequence
MKLRRIHIKTESKIQDEKAGKNNWSAKIRGKEQLMSKDISIGATVVTDDFVGVVNDSVSATMAMDEQDDGVVGDFKSEENASFMPRVLATTRIHSVILPLLHSWTSFLNI
VTFSCCVSGTFSIRFGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGNPQRTHHHLHDYL
KNVKPYEGISGSSLLRLHE