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Clc09G17145 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G17145
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCytochrome c biogenesis FN
Genome locationClcChr09:27359349..27362193
RNA-Seq ExpressionClc09G17145
SyntenyClc09G17145
Gene Ontology termsGO:0015886 - heme transport (biological process)
GO:0017004 - cytochrome complex assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015232 - heme transporter activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR003567 - Cytochrome c-type biogenesis protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ATW72861.1 ccmFN [Solanum commersonii]1.4e-2780Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
        GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMT ISMILFSQMKQQA VRRTYKKEMVVARSTLVH  L    +  K   +VF+ C GG
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
QEM01536.1 cytochrome C biogenesis factor N [Solanum tuberosum]1.4e-2780Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
        GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMT ISMILFSQMKQQA VRRTYKKEMVVARSTLVH  L    +  K   +VF+ C GG
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
YP_009049706.1 cytochrome c maturation protein CcmFN [Capsicum annuum]1.4e-2780Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
        GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMT ISMILFSQMKQQA VRRTYKKEMVVARSTLVH  L    +  K   +VF+ C GG
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
YP_009430473.1 cytochrome c maturation protein CcmFN [Solanum lycopersicum]1.4e-2780Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
        GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMT ISMILFSQMKQQA VRRTYKKEMVVARSTLVH  L    +  K   +VF+ C GG
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
YP_009682049.1 cytochrome c biogenesis FN [Physochlaina orientalis]1.4e-2780Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
        GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMT ISMILFSQMKQQA VRRTYKKEMVVARSTLVH  L    +  K   +VF+ C GG
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
TrEMBL top hitse value%identityAlignment
A0A0C5B9X0 Cytochrome c biogenesis FN6.6e-2880Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
        GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMT ISMILFSQMKQQA VRRTYKKEMVVARSTLVH  L    +  K   +VF+ C GG
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
A0A290WKZ9 CcmFn6.6e-2880Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
        GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMT ISMILFSQMKQQA VRRTYKKEMVVARSTLVH  L    +  K   +VF+ C GG
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
A0A5C1H778 Cytochrome C biogenesis factor N6.6e-2880Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
        GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMT ISMILFSQMKQQA VRRTYKKEMVVARSTLVH  L    +  K   +VF+ C GG
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
A0A7S9H4F1 Cytochrome c biogenesis factor N6.6e-2880Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
        GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMT ISMILFSQMKQQA VRRTYKKEMVVARSTLVH  L    +  K   +VF+ C GG
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
A0A7S9H578 Cytochrome c biogenesis factor N6.6e-2880Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
        GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMT ISMILFSQMKQQA VRRTYKKEMVVARSTLVH  L    +  K   +VF+ C GG
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGG
SwissProt top hitse value%identityAlignment
P36180 Probable cytochrome c biosynthesis protein2.9e-1272.92Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQA
        GTF +RSGLLA VHSFATD TRGIFLW FFLL+T IS + F +MKQQ+
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQA
Q04647 Probable cytochrome c biosynthesis protein1.4e-2794.12Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHL
        GT SIRSGLLAPVHSFATDDTRGIFLWRFFLLMT ISMILFSQMKQQA VRRTYKKEMV+ARSTLVHL
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHL
Q04648 Probable cytochrome c biosynthesis protein1.8e-2794.12Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHL
        GTFSIRSGLLA VHSFATDDTRGIFLWRFFLLMT ISMILFSQMKQQA VRRTY+KEMVVARSTLVHL
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHL
Q33884 Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 2 (Fragment)1.3e-2591.18Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHL
        GTFSIRSGLLA VHSFATDDTRGIFLW FFLLMT I MILF QMKQQA VRRTYKKEMVVARSTLVHL
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHL
Q9I3N2 Cytochrome c-type biogenesis protein CcmF3.7e-0450Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFS
        GTF +RSG+L  VH+FA+D  RG+F+  F LL+   S+ LF+
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFS
Arabidopsis top hitse value%identityAlignment
AT2G07768.1 Cytochrome C assembly protein2.2e-2894.12Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHL
        GTFSIRSGLLAPVHSFATDDTRGIFLW FFLLMT ISMILF QMKQQA VRRTYKKEMVVARSTLVHL
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHL
ATMG00960.1 Cytochrome C assembly protein2.2e-2894.12Show/hide
Query:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHL
        GTFSIRSGLLAPVHSFATDDTRGIFLW FFLLMT ISMILF QMKQQA VRRTYKKEMVVARSTLVHL
Subjt:  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAGGACATCTCTATAGGTGCGACCGTGGTGACAGACGACTTTGTAGGTGTAGTGAACGATTCTGTAAGTGCGACGATGGCGATGGACGAGCAAGATGATGGAAC
CTTTTCAATACGGTCCGGATTGCTAGCTCCTGTTCATAGTTTTGCTACAGATGATACACGAGGAATCTTTTTATGGCGGTTCTTCCTTCTAATGACCGACATATCAATGA
TTCTTTTCTCCCAAATGAAGCAGCAGGCATTGGTCCGTAGAACCTATAAGAAAGAGATGGTTGTGGCACGAAGTACTCTTGTGCACCTATGTCTACATGACTATTTGAAA
AATGTAAAACCGCACGAGGTAGTATTTGAAAAATGTCATGGTGGCTCCTATCATAAGAAAGCTTCACACATCATGCTTGTATACGTATTCATATCCTTGATTGGGCGTCA
TGCTATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCAAGGACATCTCTATAGGTGCGACCGTGGTGACAGACGACTTTGTAGGTGTAGTGAACGATTCTGTAAGTGCGACGATGGCGATGGACGAGCAAGATGATGGAAC
CTTTTCAATACGGTCCGGATTGCTAGCTCCTGTTCATAGTTTTGCTACAGATGATACACGAGGAATCTTTTTATGGCGGTTCTTCCTTCTAATGACCGACATATCAATGA
TTCTTTTCTCCCAAATGAAGCAGCAGGCATTGGTCCGTAGAACCTATAAGAAAGAGATGGTTGTGGCACGAAGTACTCTTGTGCACCTATGTCTACATGACTATTTGAAA
AATGTAAAACCGCACGAGGTAGTATTTGAAAAATGTCATGGTGGCTCCTATCATAAGAAAGCTTCACACATCATGCTTGTATACGTATTCATATCCTTGATTGGGCGTCA
TGCTATGTAG
Protein sequenceShow/hide protein sequence
MSKDISIGATVVTDDFVGVVNDSVSATMAMDEQDDGTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTDISMILFSQMKQQALVRRTYKKEMVVARSTLVHLCLHDYLK
NVKPHEVVFEKCHGGSYHKKASHIMLVYVFISLIGRHAM