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Clc09G17210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G17210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:27782575..27785551
RNA-Seq ExpressionClc09G17210
SyntenyClc09G17210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024976272.1 uncharacterized protein LOC112514172 [Cynara cardunculus var. scolymus]2.3e-0431.01Show/hide
Query:  MLQQDKYNIDATTGGALVKKAPSKAKTLIFTMAENNQQLTMWDHITQPAISSKEVSELRVE--LAELSTLVKQAFSAKESVVEVNYAENQQGGNGEEHNR
        +L  D+  IDA +GGA+  K P++ + LI TMAEN+QQ ++ + + +    + E++   +E  L +L+ LVKQ    KE  V V  AEN     G     
Subjt:  MLQQDKYNIDATTGGALVKKAPSKAKTLIFTMAENNQQLTMWDHITQPAISSKEVSELRVE--LAELSTLVKQAFSAKESVVEVNYAENQQGGNGEEHNR

Query:  VYYSNPE-EPRIVPADYHSQLTQWFSQF----PRAIF---TIFEPEEALALKIGLEIE
         Y   P+ + R    ++ +Q    F  F    P+  F   T F P +A +   G+ +E
Subjt:  VYYSNPE-EPRIVPADYHSQLTQWFSQF----PRAIF---TIFEPEEALALKIGLEIE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCAGCAAGACAAGTACAATATAGATGCAACTACAGGAGGTGCTCTAGTAAAAAAGGCCCCTTCTAAGGCCAAGACTCTGATTTTCACCATGGCTGAGAACAACCA
GCAATTAACCATGTGGGACCATATTACTCAACCAGCCATATCCTCAAAAGAGGTAAGTGAATTAAGGGTTGAACTTGCTGAACTCTCTACTCTTGTGAAACAGGCTTTCT
CTGCTAAGGAGTCTGTTGTTGAGGTGAACTATGCAGAGAACCAACAAGGTGGAAATGGTGAAGAGCATAACAGAGTCTACTATTCAAATCCAGAAGAGCCAAGAATTGTT
CCAGCAGACTACCACTCTCAATTAACCCAATGGTTCTCCCAATTCCCTCGTGCTATTTTCACCATTTTTGAACCAGAGGAAGCTCTAGCTTTGAAAATCGGGTTGGAAAT
AGAACACTGTTGGCCAAAGAGGCTGCTAGAGTTGCTGCATAGCCCCAGCCCGCACGCACGCGCACTGCTGCCCCTCACGCCTCCGGTTTACGCGACACAGACGCATGCCC
AGCGCCCAGCGCCCACGCCTTGCACCTGCCGACAGCCCTTCACCCAACTGCCGCCCACCAAGGTTGCTTATGACCATTTTGGGAGCTCAATGCTGAGGAATATTGAGAAG
GCATTTGAGTTTCCTAGGGACCCAGTACTGAGGGACTTGGAGAAGGTTATTCAGGTACAGCTAGACAGTGAACCTCACAAAAGGAGTGATATTTGCTGTCCTCACATCTC
CTCTCAGGTTATGGAGGGTAATCTGGGAGGGGGTGTGACAACCACCACCTACATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGCAGCAAGACAAGTACAATATAGATGCAACTACAGGAGGTGCTCTAGTAAAAAAGGCCCCTTCTAAGGCCAAGACTCTGATTTTCACCATGGCTGAGAACAACCA
GCAATTAACCATGTGGGACCATATTACTCAACCAGCCATATCCTCAAAAGAGGTAAGTGAATTAAGGGTTGAACTTGCTGAACTCTCTACTCTTGTGAAACAGGCTTTCT
CTGCTAAGGAGTCTGTTGTTGAGGTGAACTATGCAGAGAACCAACAAGGTGGAAATGGTGAAGAGCATAACAGAGTCTACTATTCAAATCCAGAAGAGCCAAGAATTGTT
CCAGCAGACTACCACTCTCAATTAACCCAATGGTTCTCCCAATTCCCTCGTGCTATTTTCACCATTTTTGAACCAGAGGAAGCTCTAGCTTTGAAAATCGGGTTGGAAAT
AGAACACTGTTGGCCAAAGAGGCTGCTAGAGTTGCTGCATAGCCCCAGCCCGCACGCACGCGCACTGCTGCCCCTCACGCCTCCGGTTTACGCGACACAGACGCATGCCC
AGCGCCCAGCGCCCACGCCTTGCACCTGCCGACAGCCCTTCACCCAACTGCCGCCCACCAAGGTTGCTTATGACCATTTTGGGAGCTCAATGCTGAGGAATATTGAGAAG
GCATTTGAGTTTCCTAGGGACCCAGTACTGAGGGACTTGGAGAAGGTTATTCAGGTACAGCTAGACAGTGAACCTCACAAAAGGAGTGATATTTGCTGTCCTCACATCTC
CTCTCAGGTTATGGAGGGTAATCTGGGAGGGGGTGTGACAACCACCACCTACATGTAG
Protein sequenceShow/hide protein sequence
MLQQDKYNIDATTGGALVKKAPSKAKTLIFTMAENNQQLTMWDHITQPAISSKEVSELRVELAELSTLVKQAFSAKESVVEVNYAENQQGGNGEEHNRVYYSNPEEPRIV
PADYHSQLTQWFSQFPRAIFTIFEPEEALALKIGLEIEHCWPKRLLELLHSPSPHARALLPLTPPVYATQTHAQRPAPTPCTCRQPFTQLPPTKVAYDHFGSSMLRNIEK
AFEFPRDPVLRDLEKVIQVQLDSEPHKRSDICCPHISSQVMEGNLGGGVTTTTYM