; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G17290 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G17290
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCRM domain-containing protein
Genome locationClcChr09:27859590..27866377
RNA-Seq ExpressionClc09G17290
SyntenyClc09G17290
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily
IPR040286 - CRM domain-containing protein At3g25440-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571683.1 putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.6e-14186.18Show/hide
Query:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE
        M RG +LSI ISRDSL+GFISLIRNVS LSL NIP+SFGQSSY SCE+QISN   KSLQEST I  P GF F +RYSM ES  GF+KWQSVR+FSN AVE
Subjt:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE

Query:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE
        LKTD NIVRFSFG  SS+NGSP KQKKVAK K SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSV+E YDPEILTE
Subjt:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE

Query:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK
        EEKHYLKRTGEKKKN++LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSII YRGKNYV+PEVMSP DTLSK
Subjt:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK

Query:  DKVV
        DK +
Subjt:  DKVV

KAG7011409.1 putative CRM domain-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.0e-14186.18Show/hide
Query:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE
        M RG +LSI ISRDSL+GFISLIRNVS LSL NIP+SFGQSSY SCE+QISN   KSLQEST I  P GF F +RYSM ES  GF+KWQSVR+FSN AVE
Subjt:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE

Query:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE
        LKTD NIVRFSFG  SS+NGSP KQKKVAK K SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSV+E YDPEILTE
Subjt:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE

Query:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK
        EEKHYLKRTGEKKKN++LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSI+ YRGKNYV+PEVMSPPDTLSK
Subjt:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK

Query:  DKVV
        DK +
Subjt:  DKVV

XP_022967603.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima]4.9e-14487.83Show/hide
Query:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE
        M RG ALSI ISRDSL+GFISLIRNVS LSL NIP SFGQSSY SCEHQISN   KSLQEST I  P GF FT+RYSM ES  GF+KWQSVR+FSN AVE
Subjt:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE

Query:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE
        LKTD NIVRFSFG  SS+NGSP KQKKVAK K SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSV+E YDPEILTE
Subjt:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE

Query:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK
        EEKHYLKRTGEKKKN+VLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSI+ YRGKNYVQPEVMSPPDTLSK
Subjt:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK

Query:  DKVV
        DK +
Subjt:  DKVV

XP_038886903.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X1 [Benincasa hispida]3.1e-14387.83Show/hide
Query:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE
        MP G ALSI ISRDSLFG ISLIRNV HLSLLNIP SFGQSSYGSCEHQIS+ T KSLQES  I  P GF F RRYSM ESF GFKKWQSVRYFSNAAVE
Subjt:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE

Query:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE
        LKTD + VRFSFG  S++NGSP KQ KVAKTK SKKAK+NELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSV+EKYDPE+LTE
Subjt:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE

Query:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK
        EEKHYLKR GEKKKN+VLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHE+AEELARLSKGIVIDIKPNNSII YRGKNYVQPEVMSPPDTLSK
Subjt:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK

Query:  DKVV
        DK +
Subjt:  DKVV

XP_038886904.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X2 [Benincasa hispida]3.1e-14388.41Show/hide
Query:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE
        MP G ALSI ISRDSLFG ISLIRNV HLSLLNIP SFGQSSYGSCEHQIS+ T KSLQES  I  P GF F RRYSM ESF GFKKWQSVRYFSNAAVE
Subjt:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE

Query:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE
        LKTD + VRFSFG  S++NGSP KQ KVAKTK SKKAK+NELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSV+EKYDPE+LTE
Subjt:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE

Query:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK
        EEKHYLKR GEKKKN+VLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHE+AEELARLSKGIVIDIKPNNSII YRGKNYVQPEVMSPPDTLSK
Subjt:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK

Query:  DK
        DK
Subjt:  DK

TrEMBL top hitse value%identityAlignment
A0A1S3C151 uncharacterized CRM domain-containing protein At3g25440, chloroplastic2.3e-13985.25Show/hide
Query:  MPRGCALS-ITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAV
        MPR    S ITISR SLFGF SLIRN S LSLL++P SFGQSS+GSCEHQ S+R VKSL EST   CP G   T RYSMWES+ GFK+WQSVR+FSNA V
Subjt:  MPRGCALS-ITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAV

Query:  ELKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILT
        ELKTD N VRFSFG PSS+NGS LKQKKVAKTK SKK KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFE+PKSV+EKYDPEILT
Subjt:  ELKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILT

Query:  EEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLS
        EEEKHYLKRTGEKKKN+VLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPGQVHEYAEEL+RLSKGIVIDIKPNNSII YRGKNYVQPEVMSPPDTLS
Subjt:  EEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLS

Query:  KDKVV
        KDK +
Subjt:  KDKVV

A0A5A7SK96 Putative CRM domain-containing protein8.1e-13786.01Show/hide
Query:  SRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFS
        S  SLFGF SLIRN S LSLL++P SFGQSS+GSCEHQ S+R VKSL EST   CP G   T RYSMWES+ GFK+WQSVR+FSNA VELKTD N VRFS
Subjt:  SRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFS

Query:  FGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGE
        FG PSS+NGS LKQKKVAKTK SKK KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFE+PKSV+EKYDPEILTEEEKHYLKRTGE
Subjt:  FGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGE

Query:  KKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKVV
        KKKN+VLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPGQVHEYAEEL+RLSKGIVIDIKPNNSII YRGKNYVQPEVMSPPDTLSKDK +
Subjt:  KKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKVV

A0A6J1CKB1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic2.5e-13883.88Show/hide
Query:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE
        MPRG  LS  ++R+SL GFISLIRNVS  SL NIPASFGQS YGSCEHQ SN  V  LQEST IH P GFLF+RRY++ E   GFKKWQS R+F + AVE
Subjt:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE

Query:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE
        LKTD NIVRFSFG PS +NGSP KQKKVAKTK SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEV K V+EKYDPEILTE
Subjt:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE

Query:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK
        EEKH+LKRTGEKKKN+VLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEEL RLSKGIV+DIKPNN+II YRGKNYVQPEVMSPPDTLSK
Subjt:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK

Query:  DKVV
        DK +
Subjt:  DKVV

A0A6J1HK68 uncharacterized CRM domain-containing protein At3g25440, chloroplastic3.2e-14186.18Show/hide
Query:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE
        M RG +LSI ISRDSL+GFISLIRNVS LSL NIP+SFGQSSY SCE+QISN   KSLQEST I  P GF F +RYSM ES  GF+KWQSVR+FSN AVE
Subjt:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE

Query:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE
        LKTD NIVRFSFG  SS+NGSP KQKKVAK K SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSV+E YDPEILTE
Subjt:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE

Query:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK
        EEKHYLKRTGEKKKN++LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSII YRGKNYV+PEVMSP DTLSK
Subjt:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK

Query:  DKVV
        DK +
Subjt:  DKVV

A0A6J1HVJ0 uncharacterized CRM domain-containing protein At3g25440, chloroplastic2.4e-14487.83Show/hide
Query:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE
        M RG ALSI ISRDSL+GFISLIRNVS LSL NIP SFGQSSY SCEHQISN   KSLQEST I  P GF FT+RYSM ES  GF+KWQSVR+FSN AVE
Subjt:  MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVE

Query:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE
        LKTD NIVRFSFG  SS+NGSP KQKKVAK K SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSV+E YDPEILTE
Subjt:  LKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTE

Query:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK
        EEKHYLKRTGEKKKN+VLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSI+ YRGKNYVQPEVMSPPDTLSK
Subjt:  EEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSK

Query:  DKVV
        DK +
Subjt:  DKVV

SwissProt top hitse value%identityAlignment
F4J2U9 CRM-domain containing factor CFM3A, chloroplastic/mitochondrial1.2e-1738.67Show/hide
Query:  LEKAKRKEAWLIEKLRKFEVPKSVIE--------KYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEY
        + K +RK A+   KL K E   + +E        + DPE +T+EE+   ++ G K K ++LLGRRGVF G V NMHLHWK  E VK+I K      V + 
Subjt:  LEKAKRKEAWLIEKLRKFEVPKSVIE--------KYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEY

Query:  AEELARLSKGIVIDI---KPNNSIILYRGKNYVQPEVMSPPDTLSKDKVV
        A  L   S GI++ I       +II+YRG++Y +P ++ P + L+K K +
Subjt:  AEELARLSKGIVIDI---KPNNSIILYRGKNYVQPEVMSPPDTLSKDKVV

Q2R1U8 CRM-domain containing factor CFM3, chloroplastic/mitochondrial6.2e-1733.14Show/hide
Query:  KTSPNPEVRIRYSLEKAK-----RKEAWLIE-KLRKFEVPKSVIEKYD-----------PEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLH
        K   N E ++  ++E A+     RK  W ++   +K E  + V+ K +           PE +T+EE+   ++ G + K ++LLGRRGVF G + NMHLH
Subjt:  KTSPNPEVRIRYSLEKAK-----RKEAWLIE-KLRKFEVPKSVIEKYD-----------PEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLH

Query:  WKKHETVKVICKPCKPGQVHEYAEELARLSKGIVID---IKPNNSIILYRGKNYVQPEVMSPPDTLSKDKVV
        WK  E VK++ K    G V + A  L   S GI++    +    +I+++RGK+Y +P  + P + LSK K +
Subjt:  WKKHETVKVICKPCKPGQVHEYAEELARLSKGIVID---IKPNNSIILYRGKNYVQPEVMSPPDTLSKDKVV

Q67XL4 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic1.7e-3846.97Show/hide
Query:  SSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKN
        SS +G    + K  K K  K+A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E  +S    +DPEILT EE  Y  + G K KN
Subjt:  SSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKN

Query:  YVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQP--EVMSPPDTLSKDKVVFGSACKN
        YV +GRRG++ GV+LNMHLHWKKH+T++V+ K   P +V E A ELARL+ GIV+D+   N+II+YRGKNYVQP  E+MSP  TL + K +  S C++
Subjt:  YVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQP--EVMSPPDTLSKDKVVFGSACKN

Q8L7C2 CRM-domain containing factor CFM2, chloroplastic3.3e-1832.65Show/hide
Query:  GEPSSSNGSPLKQKKVAK-TKFSKKAKLNELRLYRLKAKKKKTS----PNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLK
        G   + N   +K + V +  +   K + + ++ +++K++++ +         +++  +LEK    E  L + L   E P+  +   D E +T +EK+ L+
Subjt:  GEPSSSNGSPLKQKKVAK-TKFSKKAKLNELRLYRLKAKKKKTS----PNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLK

Query:  RTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIK---PNNSIILYRGKNYVQPEVMSPPDTLSK
        + G K K ++LLGRRGVF G + NMHLHWK  E VK+IC        H+ AE L   S GI++ ++      +II+YRGKNY +P+ + P   LSK
Subjt:  RTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIK---PNNSIILYRGKNYVQPEVMSPPDTLSK

Q9LT57 CRM-domain containing factor CFM9, mitochondrial6.2e-3343.16Show/hide
Query:  SSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKN
        S+S G  ++ K  ++ +      L E+R  R K  KKK   + E R+ Y+L++AK+K A L++KL+K+++P+     +DPE+ T E+    K+ G K KN
Subjt:  SSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKN

Query:  YVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKVVF
        YV +G RGVFGGVV NMH+HWK HETV+V C      ++ E A  +ARLS G+VI+I    +II++RG+NY QP+ + P +TL+K K +F
Subjt:  YVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKVVF

Arabidopsis top hitse value%identityAlignment
AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein2.6e-4756.67Show/hide
Query:  LKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRR
        LK K+  + +    A   + R   +K KKKK   N E RI+Y LEKAK KEA LIE+L+++EV K    +  P  +T EE+ YLK+ G+K+ NYV +GRR
Subjt:  LKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRR

Query:  GVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDK
        GVFGGV+LNMHLHWKKHETVKVIC   KPGQV +YAEELA+LS G+ ++I  +++II YRGK YVQP+VMSP DTLSK +
Subjt:  GVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDK

AT3G25440.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.2e-3946.97Show/hide
Query:  SSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKN
        SS +G    + K  K K  K+A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E  +S    +DPEILT EE  Y  + G K KN
Subjt:  SSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKN

Query:  YVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQP--EVMSPPDTLSKDKVVFGSACKN
        YV +GRRG++ GV+LNMHLHWKKH+T++V+ K   P +V E A ELARL+ GIV+D+   N+II+YRGKNYVQP  E+MSP  TL + K +  S C++
Subjt:  YVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQP--EVMSPPDTLSKDKVVFGSACKN

AT3G25440.2 RNA-binding CRS1 / YhbY (CRM) domain protein1.2e-3946.97Show/hide
Query:  SSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKN
        SS +G    + K  K K  K+A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E  +S    +DPEILT EE  Y  + G K KN
Subjt:  SSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKN

Query:  YVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQP--EVMSPPDTLSKDKVVFGSACKN
        YV +GRRG++ GV+LNMHLHWKKH+T++V+ K   P +V E A ELARL+ GIV+D+   N+II+YRGKNYVQP  E+MSP  TL + K +  S C++
Subjt:  YVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQP--EVMSPPDTLSKDKVVFGSACKN

AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein4.4e-3443.16Show/hide
Query:  SSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKN
        S+S G  ++ K  ++ +      L E+R  R K  KKK   + E R+ Y+L++AK+K A L++KL+K+++P+     +DPE+ T E+    K+ G K KN
Subjt:  SSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKN

Query:  YVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKVVF
        YV +G RGVFGGVV NMH+HWK HETV+V C      ++ E A  +ARLS G+VI+I    +II++RG+NY QP+ + P +TL+K K +F
Subjt:  YVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKVVF

AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein3.9e-9169.8Show/hide
Query:  IHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPL---KQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEV
        + C S      +   W  F+ +    S RY SN+ +EL+TD N+VRF+F   SSS  + +   K+KK  + K S+KAK+NELR YRLKAKKK  SPNPEV
Subjt:  IHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPL---KQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEV

Query:  RIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPC-KPGQVHEYAE
        RIRY LEKAKRKE WLIEKLRK++VPKS  E YDPE LTEEE+HYLKRTGEK+KN+VL+GRRGVFGGVVLN+HLHWKKHETVKVICKPC KPGQVHEYAE
Subjt:  RIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPC-KPGQVHEYAE

Query:  ELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKVV
        ELARLSKGIVID+KPNN+I+LYRGKNYV+PEVMSP DTLSKDK +
Subjt:  ELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGGGGTTGCGCTCTATCCATCACCATTTCAAGGGATTCATTGTTTGGATTCATTTCTTTGATTAGAAATGTGTCACATCTATCTTTATTGAACATACCTGCATC
GTTTGGGCAGTCTTCATATGGAAGTTGTGAGCATCAAATAAGTAATCGTACAGTAAAGTCTCTCCAAGAATCAACATATATACACTGTCCGTCTGGCTTCCTTTTTACTA
GGAGATATAGTATGTGGGAGAGCTTTAGTGGGTTTAAAAAATGGCAATCTGTTAGGTATTTTAGCAATGCAGCTGTGGAGCTTAAGACAGACTGCAATATTGTCAGGTTT
TCTTTTGGTGAGCCTTCTAGTAGTAACGGTTCCCCACTAAAACAAAAGAAGGTGGCAAAAACCAAATTTTCTAAGAAGGCCAAATTGAATGAACTCCGACTCTATCGTCT
TAAGGCAAAAAAGAAGAAGACATCCCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGAAAAGAAGCGTGGCTAATTGAGAAGTTGAGGAAATTTG
AGGTTCCAAAGTCTGTAATAGAAAAGTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTATGTTCTATTGGGG
AGGCGAGGAGTCTTTGGTGGTGTTGTTCTCAATATGCATTTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAGCCTGGGCAGGTTCATGAATA
TGCCGAAGAACTTGCTCGATTAAGCAAAGGCATTGTGATTGATATTAAACCCAACAATAGCATAATTCTTTATCGGGGAAAGAACTATGTGCAACCCGAAGTAATGTCAC
CTCCAGATACGCTATCAAAAGACAAGGTCGTATTTGGAAGCGCGTGCAAAAATCTCTCCTTCATCATCTTCTTCGTGTTTTCTTCGCCGGCGTGGAAGCTTCCAAGATCG
GTTTTCAAACCCCCACCGTTTTCCTCGCCGGAGTCGTGGTCGCCGCTGGTTGCTCGACTCGTTTGCCCTGAGTCGCAAAATCCGCTGCTACCTGACGTTCGTGGGTGTTC
CAGTCCACCGTCCGTTCACTGTTCAAGTTGGCAGCACGCCGCCGTGCGATTCGTTCGGCCGTACGTCATCAGCGCTGCCCATTTCGTCGTAGCCGTTGTGGCCGGCCGTG
GGAGTGAGTTCTCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
AAAACTCCCATCTTCACACCCTGCAGCCGCACGACAACCCCCCATTCTCATCTTCTTCTTCGTTTAGCCCTAGTCGCCTGCCTCCCTTGCAAGTCACTGGAAGTCTGTCC
GCCGGCAGCCACACTGGTAGTCTCCGTCTAGCCGAACTCTCGCCTAACCGCCGTCGATAGGAGCTGGTCGTCGCCGCCCACTGTTGTCGCGCCGCCGTTTTCTCTCACTG
CGAACAGTAGCCACTGCCGCGCTTCCTTCGCCGTGGGTTCGCCTCCGCCGCCAGTCGCGCCCGGTTCACCGCCGCCGTGGATTCGCCGTCACCAGCGCTGGAACTCATTG
GAATTGCATTTTTGTGAGTTTTAGAGTTGTTGAAGTGTTATCCAGTAGGATAAAGACTGGATTGATGGCTTTTGGTTGGATTCGAGATACTATCCGGTGAAGGAAGCAAG
TACGTTTTTGGTTTCCGTTCAAGTTTTATTGGAGATTATTTTGCTCCGATATCGGTATTTGAACTTAATCTTGAGTGAAGGAACTGTTGGCTAGGGATTGATTGATTTAC
GACCATGCCTCGGGGTTGCGCTCTATCCATCACCATTTCAAGGGATTCATTGTTTGGATTCATTTCTTTGATTAGAAATGTGTCACATCTATCTTTATTGAACATACCTG
CATCGTTTGGGCAGTCTTCATATGGAAGTTGTGAGCATCAAATAAGTAATCGTACAGTAAAGTCTCTCCAAGAATCAACATATATACACTGTCCGTCTGGCTTCCTTTTT
ACTAGGAGATATAGTATGTGGGAGAGCTTTAGTGGGTTTAAAAAATGGCAATCTGTTAGGTATTTTAGCAATGCAGCTGTGGAGCTTAAGACAGACTGCAATATTGTCAG
GTTTTCTTTTGGTGAGCCTTCTAGTAGTAACGGTTCCCCACTAAAACAAAAGAAGGTGGCAAAAACCAAATTTTCTAAGAAGGCCAAATTGAATGAACTCCGACTCTATC
GTCTTAAGGCAAAAAAGAAGAAGACATCCCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGAAAAGAAGCGTGGCTAATTGAGAAGTTGAGGAAA
TTTGAGGTTCCAAAGTCTGTAATAGAAAAGTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTATGTTCTATT
GGGGAGGCGAGGAGTCTTTGGTGGTGTTGTTCTCAATATGCATTTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAGCCTGGGCAGGTTCATG
AATATGCCGAAGAACTTGCTCGATTAAGCAAAGGCATTGTGATTGATATTAAACCCAACAATAGCATAATTCTTTATCGGGGAAAGAACTATGTGCAACCCGAAGTAATG
TCACCTCCAGATACGCTATCAAAAGACAAGGTCGTATTTGGAAGCGCGTGCAAAAATCTCTCCTTCATCATCTTCTTCGTGTTTTCTTCGCCGGCGTGGAAGCTTCCAAG
ATCGGTTTTCAAACCCCCACCGTTTTCCTCGCCGGAGTCGTGGTCGCCGCTGGTTGCTCGACTCGTTTGCCCTGAGTCGCAAAATCCGCTGCTACCTGACGTTCGTGGGT
GTTCCAGTCCACCGTCCGTTCACTGTTCAAGTTGGCAGCACGCCGCCGTGCGATTCGTTCGGCCGTACGTCATCAGCGCTGCCCATTTCGTCGTAGCCGTTGTGGCCGGC
CGTGGGAGTGAGTTCTCTTCTTGA
Protein sequenceShow/hide protein sequence
MPRGCALSITISRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRF
SFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLG
RRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKVVFGSACKNLSFIIFFVFSSPAWKLPRS
VFKPPPFSSPESWSPLVARLVCPESQNPLLPDVRGCSSPPSVHCSSWQHAAVRFVRPYVISAAHFVVAVVAGRGSEFSS