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Clc09G17340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G17340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTropomyosin-like
Genome locationClcChr09:27923034..27930421
RNA-Seq ExpressionClc09G17340
SyntenyClc09G17340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136872.1 uncharacterized protein LOC101218756 isoform X1 [Cucumis sativus]1.2e-6594.59Show/hide
Query:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVANL+EM SNL+SLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAIT+AAHARSEKRQAEAAQ+AAE+HVQ
Subjt:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE
        EVT+ELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGG+E
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE

XP_022963475.1 uncharacterized protein LOC111463800 isoform X1 [Cucurbita moschata]2.2e-6797.3Show/hide
Query:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVAN++EMASNLESLQK+L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE
        EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE

XP_022963476.1 uncharacterized protein LOC111463800 isoform X2 [Cucurbita moschata]1.6e-6597.24Show/hide
Query:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVAN++EMASNLESLQK+L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLG
        EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLG
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLG

XP_022967634.1 uncharacterized protein LOC111467076 isoform X1 [Cucurbita maxima]4.1e-6695.95Show/hide
Query:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWS AVAN++EMASNLESLQK+L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE
        EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGK+
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE

XP_038886855.1 uncharacterized protein LOC120077075 isoform X1 [Benincasa hispida]1.9e-6696.62Show/hide
Query:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVANL+EMASNLESLQKLLLKKAVYVDDETFARASLCS+QARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQ+AAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE
        EVTRELENTTKVFQLHMDELR KQEEI+KRDKDIKLLEAIIQTLGGKE
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE

TrEMBL top hitse value%identityAlignment
A0A0A0K2J2 Uncharacterized protein5.8e-6694.59Show/hide
Query:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVANL+EM SNL+SLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAIT+AAHARSEKRQAEAAQ+AAE+HVQ
Subjt:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE
        EVT+ELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGG+E
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE

A0A1S3C1M4 uncharacterized protein LOC1034954301.3e-6594.59Show/hide
Query:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVANL+EM SNL+ LQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQ+AAE+HVQ
Subjt:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE
        EVT+ELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGG+E
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE

A0A6J1HG82 uncharacterized protein LOC111463800 isoform X27.6e-6697.24Show/hide
Query:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVAN++EMASNLESLQK+L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLG
        EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLG
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLG

A0A6J1HI40 uncharacterized protein LOC111463800 isoform X11.1e-6797.3Show/hide
Query:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVAN++EMASNLESLQK+L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE
        EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE

A0A6J1HXA5 uncharacterized protein LOC111467076 isoform X12.0e-6695.95Show/hide
Query:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWS AVAN++EMASNLESLQK+L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE
        EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGK+
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE

SwissProt top hitse value%identityAlignment
F4IFD0 Protein MAIN-LIKE 21.3e-0636.71Show/hide
Query:  GECTITLQDIAFQFGLLVDGEPVTSLLVYDWKQVSEDFLGVRPL--QLKGSRLSIPWLSSQFTELSSDADEITIQRDSR
        GE T+TL+DIA   GL +DG+PV  L       V E +LG  P      G  + + WL   F+E   DA    ++R +R
Subjt:  GECTITLQDIAFQFGLLVDGEPVTSLLVYDWKQVSEDFLGVRPL--QLKGSRLSIPWLSSQFTELSSDADEITIQRDSR

Q9LNG5 Serine/threonine-protein phosphatase 7 long form homolog2.3e-1144.3Show/hide
Query:  GECTITLQDIAFQFGLLVDGEPVTSLLVYDWKQVSEDFLGVR--PLQLKGSRLSIPWLSSQFTELSSDADEITIQRDSR
        GE T+TLQD+    GL VDG  VT    Y+W  + ED LG R  P  L GS +S+ WL   F  L +D DE+T++  +R
Subjt:  GECTITLQDIAFQFGLLVDGEPVTSLLVYDWKQVSEDFLGVR--PLQLKGSRLSIPWLSSQFTELSSDADEITIQRDSR

Arabidopsis top hitse value%identityAlignment
AT1G17930.1 Aminotransferase-like, plant mobile domain family protein5.7e-0536.25Show/hide
Query:  GECTITLQDIAFQFGLLVDGEPVTSLLVYDW--KQVSEDFLGVRPL-QLKGSRLSIPWLSSQFTELSSDADEITIQRDSR
        GE TITL +++   GL VDG+PV  +   D    QV    LG  P  +L G+R++  WL   F E    A    I+  +R
Subjt:  GECTITLQDIAFQFGLLVDGEPVTSLLVYDW--KQVSEDFLGVRPL-QLKGSRLSIPWLSSQFTELSSDADEITIQRDSR

AT1G48120.1 hydrolases;protein serine/threonine phosphatases1.6e-1244.3Show/hide
Query:  GECTITLQDIAFQFGLLVDGEPVTSLLVYDWKQVSEDFLGVR--PLQLKGSRLSIPWLSSQFTELSSDADEITIQRDSR
        GE T+TLQD+    GL VDG  VT    Y+W  + ED LG R  P  L GS +S+ WL   F  L +D DE+T++  +R
Subjt:  GECTITLQDIAFQFGLLVDGEPVTSLLVYDWKQVSEDFLGVR--PLQLKGSRLSIPWLSSQFTELSSDADEITIQRDSR

AT2G04865.1 Aminotransferase-like, plant mobile domain family protein9.3e-0836.71Show/hide
Query:  GECTITLQDIAFQFGLLVDGEPVTSLLVYDWKQVSEDFLGVRPL--QLKGSRLSIPWLSSQFTELSSDADEITIQRDSR
        GE T+TL+DIA   GL +DG+PV  L       V E +LG  P      G  + + WL   F+E   DA    ++R +R
Subjt:  GECTITLQDIAFQFGLLVDGEPVTSLLVYDWKQVSEDFLGVRPL--QLKGSRLSIPWLSSQFTELSSDADEITIQRDSR

AT2G25010.1 Aminotransferase-like, plant mobile domain family protein6.3e-0433.33Show/hide
Query:  GECTITLQDIAFQFGLLVDGEPVTSLLVYDWKQVSEDFLG--------VRPLQLKGSRLSIPWLSSQFTELSSDA
        GE TITL ++A   GL +DG+P+    V D  +V+ D  G            ++  SR+ + WL   F+E   DA
Subjt:  GECTITLQDIAFQFGLLVDGEPVTSLLVYDWKQVSEDFLG--------VRPLQLKGSRLSIPWLSSQFTELSSDA

AT5G64180.1 unknown protein3.9e-5476.51Show/hide
Query:  MEDKGKGTD-RWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV
        ME++  G+D RW G++ N++EMASNL+SLQKLLLKKAV+V+++TF+RASL SEQARTIKVLEQRV+TLERELDAAITAAAHARSEKRQAE++QKAAE   
Subjt:  MEDKGKGTD-RWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV

Query:  QEVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE
        Q+VT+ELENTTKVF+LHM+ELR  QE+I+KRD +IKLLEAIIQTLGGKE
Subjt:  QEVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGGTGGGGAATGTACCATTACATTGCAAGACATTGCCTTCCAATTTGGATTACTAGTCGATGGAGAACCTGTCACCAGTTTGTTGGTGTATGATTGGAAACAGGT
TAGTGAAGATTTTTTGGGCGTTCGACCCCTACAATTGAAAGGCTCTAGGTTGAGCATCCCTTGGTTGTCATCGCAATTTACAGAGCTATCTTCTGATGCTGACGAGATTA
CCATACAGAGAGATAGCAGACCCACTAATACTATTGAAGTATGGGCTTATGCTTGGTTTTACACCATAGCACCACCAGTTGAGCTACCGTCTCTCGATCATTTTATTGGA
CGTGCAGTTAATGCCAGGTTCCTGTACCTCGTCGTGGCTAGTGTGAGAGAAGACGATCATCGTATGGTACATGAGTTTTCATTGACTTCTCCCTCGCCAAGTCTCTACAC
GGATCATGAAGTTGAACGACAATTGAATTGCGAATTTGCAAAACTGCAAGCGTCGGAGAAGATTCGGATCATGGAGGACAAGGGCAAAGGAACGGACAGATGGAGCGGTG
CTGTAGCTAATCTCTCAGAGATGGCCTCCAACCTAGAATCACTCCAGAAGCTTTTACTGAAGAAAGCCGTCTATGTAGACGACGAGACGTTTGCCAGAGCTTCATTGTGC
TCCGAACAAGCAAGGACGATCAAGGTTCTTGAACAAAGGGTTGAGACTTTGGAAAGGGAACTTGATGCTGCTATCACTGCTGCTGCCCATGCTCGTTCAGAAAAACGTCA
GGCTGAGGCAGCACAAAAAGCTGCTGAACTACACGTGCAGGAGGTCACCAGAGAGCTTGAGAACACTACAAAGGTATTTCAACTGCACATGGATGAATTACGCGCGAAGC
AAGAAGAAATCAACAAACGTGATAAGGATATTAAGCTCTTGGAAGCAATAATTCAAACTCTTGGTGGAAAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGGTGGGGAATGTACCATTACATTGCAAGACATTGCCTTCCAATTTGGATTACTAGTCGATGGAGAACCTGTCACCAGTTTGTTGGTGTATGATTGGAAACAGGT
TAGTGAAGATTTTTTGGGCGTTCGACCCCTACAATTGAAAGGCTCTAGGTTGAGCATCCCTTGGTTGTCATCGCAATTTACAGAGCTATCTTCTGATGCTGACGAGATTA
CCATACAGAGAGATAGCAGACCCACTAATACTATTGAAGTATGGGCTTATGCTTGGTTTTACACCATAGCACCACCAGTTGAGCTACCGTCTCTCGATCATTTTATTGGA
CGTGCAGTTAATGCCAGGTTCCTGTACCTCGTCGTGGCTAGTGTGAGAGAAGACGATCATCGTATGGTACATGAGTTTTCATTGACTTCTCCCTCGCCAAGTCTCTACAC
GGATCATGAAGTTGAACGACAATTGAATTGCGAATTTGCAAAACTGCAAGCGTCGGAGAAGATTCGGATCATGGAGGACAAGGGCAAAGGAACGGACAGATGGAGCGGTG
CTGTAGCTAATCTCTCAGAGATGGCCTCCAACCTAGAATCACTCCAGAAGCTTTTACTGAAGAAAGCCGTCTATGTAGACGACGAGACGTTTGCCAGAGCTTCATTGTGC
TCCGAACAAGCAAGGACGATCAAGGTTCTTGAACAAAGGGTTGAGACTTTGGAAAGGGAACTTGATGCTGCTATCACTGCTGCTGCCCATGCTCGTTCAGAAAAACGTCA
GGCTGAGGCAGCACAAAAAGCTGCTGAACTACACGTGCAGGAGGTCACCAGAGAGCTTGAGAACACTACAAAGGTATTTCAACTGCACATGGATGAATTACGCGCGAAGC
AAGAAGAAATCAACAAACGTGATAAGGATATTAAGCTCTTGGAAGCAATAATTCAAACTCTTGGTGGAAAAGAATAA
Protein sequenceShow/hide protein sequence
MLGGECTITLQDIAFQFGLLVDGEPVTSLLVYDWKQVSEDFLGVRPLQLKGSRLSIPWLSSQFTELSSDADEITIQRDSRPTNTIEVWAYAWFYTIAPPVELPSLDHFIG
RAVNARFLYLVVASVREDDHRMVHEFSLTSPSPSLYTDHEVERQLNCEFAKLQASEKIRIMEDKGKGTDRWSGAVANLSEMASNLESLQKLLLKKAVYVDDETFARASLC
SEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQEVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKE