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Clc09G17460 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G17460
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:28630154..28633898
RNA-Seq ExpressionClc09G17460
SyntenyClc09G17460
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCGAACGCCAGTTTTGTCGCATCGTGCAACGTATTTATATATCGTCACAGATTTTGCGACGAAAAACTCGATCGTCAGATACAGATCCCGACTGCTGAGGCTTCG
ATCGGTGTTAGTGAATCTCAATGAGTTTTGGGAGGCTCAGGCACCTGTTGCGTCCCCTGCTCCTTTTATTGATGTGATCCAGTCGGTTGCTGGAGTTTCTCGAGAGTCCA
ACAGATTGGTGGTTTTGGCTGCGTCTAAGTGCATTCCAAATGGAGTTCAGGGGTGGGAGGCGGAAGCTTTAGCCCTCTTGTTCGGTTTGAAGGCTGTACATCGGCTGGAA
GTTCCAAATCTCTTGGTCAAGCTTCGGTCAACTTCATTTATCCGGTCACTGCACCTAAGATCAATCCGGTCGAGTATGTACGCATTGATCGCCGATGCTTTTCATGTTCA
TTGTACTGATGCTCCTGGATTGACTTGTTTCCTGAAACTTCATGAAGCAAAATACCGGCAACATGTGGGCCGTGGAGTTGCAGACGCTCTCCCTCACTCGTCGGTCCAGT
CAACCCTCGAACGCCGACCGCTGCCACCAGCCATCATACGTCATCACTCCGCCAAAGATCGCACCGTCAACCGCGAAGCACCCATCACTGTCGACCAGAGGTTGCAGCTG
TCATTCGCACAAAACTTCAGATCAGCGGGTTGTCGCGTCGTCAGCGCTATGAATAGGCTCGAGCGTTCATTCGCCTCGCCGCCGCCATTTTGCTCATCCCGTCATTCATG
CACCACTATCTCAAGTCATTCGTTAGTCACCTACGCAAGTCTGCTTGTGTTTTCGCCCAACCACCCACGGTCAGTGCCATCACTAGTCGCCGTCCGCCGCCCACGCACAT
CGCCAACAACATCTTCGTTGTCTGTACTACTGCTGGGATCTTCATTGGATGTTTTTTTTGGGTTGGGTCCTCGATTTAAGTTTGAAGTATTTTTGGATCAAGCCACAGTT
TGGGTAGCCTACGAGTTTTCTACTATTTTACTGGAAGCCTATGGGTTTCCTACTATGTTCCTGGAAATTGATGGATTTCATACTATGTTATCGAGTGCCGATGGCTGCCC
AATCATGTTTGTGAGGCTTCTGCACAAGTTTTCATGTTTTCATGTTCAAGATTTTTGGTCTTCCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTCGAACGCCAGTTTTGTCGCATCGTGCAACGTATTTATATATCGTCACAGATTTTGCGACGAAAAACTCGATCGTCAGATACAGATCCCGACTGCTGAGGCTTCG
ATCGGTGTTAGTGAATCTCAATGAGTTTTGGGAGGCTCAGGCACCTGTTGCGTCCCCTGCTCCTTTTATTGATGTGATCCAGTCGGTTGCTGGAGTTTCTCGAGAGTCCA
ACAGATTGGTGGTTTTGGCTGCGTCTAAGTGCATTCCAAATGGAGTTCAGGGGTGGGAGGCGGAAGCTTTAGCCCTCTTGTTCGGTTTGAAGGCTGTACATCGGCTGGAA
GTTCCAAATCTCTTGGTCAAGCTTCGGTCAACTTCATTTATCCGGTCACTGCACCTAAGATCAATCCGGTCGAGTATGTACGCATTGATCGCCGATGCTTTTCATGTTCA
TTGTACTGATGCTCCTGGATTGACTTGTTTCCTGAAACTTCATGAAGCAAAATACCGGCAACATGTGGGCCGTGGAGTTGCAGACGCTCTCCCTCACTCGTCGGTCCAGT
CAACCCTCGAACGCCGACCGCTGCCACCAGCCATCATACGTCATCACTCCGCCAAAGATCGCACCGTCAACCGCGAAGCACCCATCACTGTCGACCAGAGGTTGCAGCTG
TCATTCGCACAAAACTTCAGATCAGCGGGTTGTCGCGTCGTCAGCGCTATGAATAGGCTCGAGCGTTCATTCGCCTCGCCGCCGCCATTTTGCTCATCCCGTCATTCATG
CACCACTATCTCAAGTCATTCGTTAGTCACCTACGCAAGTCTGCTTGTGTTTTCGCCCAACCACCCACGGTCAGTGCCATCACTAGTCGCCGTCCGCCGCCCACGCACAT
CGCCAACAACATCTTCGTTGTCTGTACTACTGCTGGGATCTTCATTGGATGTTTTTTTTGGGTTGGGTCCTCGATTTAAGTTTGAAGTATTTTTGGATCAAGCCACAGTT
TGGGTAGCCTACGAGTTTTCTACTATTTTACTGGAAGCCTATGGGTTTCCTACTATGTTCCTGGAAATTGATGGATTTCATACTATGTTATCGAGTGCCGATGGCTGCCC
AATCATGTTTGTGAGGCTTCTGCACAAGTTTTCATGTTTTCATGTTCAAGATTTTTGGTCTTCCTTTTGA
Protein sequenceShow/hide protein sequence
MCRTPVLSHRATYLYIVTDFATKNSIVRYRSRLLRLRSVLVNLNEFWEAQAPVASPAPFIDVIQSVAGVSRESNRLVVLAASKCIPNGVQGWEAEALALLFGLKAVHRLE
VPNLLVKLRSTSFIRSLHLRSIRSSMYALIADAFHVHCTDAPGLTCFLKLHEAKYRQHVGRGVADALPHSSVQSTLERRPLPPAIIRHHSAKDRTVNREAPITVDQRLQL
SFAQNFRSAGCRVVSAMNRLERSFASPPPFCSSRHSCTTISSHSLVTYASLLVFSPNHPRSVPSLVAVRRPRTSPTTSSLSVLLLGSSLDVFFGLGPRFKFEVFLDQATV
WVAYEFSTILLEAYGFPTMFLEIDGFHTMLSSADGCPIMFVRLLHKFSCFHVQDFWSSF