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Clc09G17640 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G17640
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSTE20/SPS1-related proline-alanine-rich protein kinase-like
Genome locationClcChr09:29039336..29040085
RNA-Seq ExpressionClc09G17640
SyntenyClc09G17640
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016020 - membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571852.1 hypothetical protein SDJN03_28580, partial [Cucurbita argyrosperma subsp. sororia]6.2e-1568.89Show/hide
Query:  MASRSFVVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVVAPSMPPSSIAGTPVEAPAPAASGAGFATGLGVARSMAVGVGIFAAALF
        MASRSF+V+LL++ALVAS A AGHHH+H KSPAPAPSP V  A   P    A +PV APAPA SGAG   G G A SMAVGVGIFAAALF
Subjt:  MASRSFVVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVVAPSMPPSSIAGTPVEAPAPAASGAGFATGLGVARSMAVGVGIFAAALF

KGN43805.2 hypothetical protein Csa_017194, partial [Cucumis sativus]1.5e-2483.7Show/hide
Query:  MASRSFVVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVVAPSMPPSSIAGTPVEAPAPAASGAGFATGLGVARSMAVGVGI-FAAALFV
        MASRSF+VLLLVLALVASSATAGHHHSHPKSPAPAPSPAVV APS+PPSSI+GTPVEAPAPAA+GAG  +G     SMAV VGI FAAALFV
Subjt:  MASRSFVVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVVAPSMPPSSIAGTPVEAPAPAASGAGFATGLGVARSMAVGVGI-FAAALFV

XP_022952911.1 STE20/SPS1-related proline-alanine-rich protein kinase-like [Cucurbita moschata]1.0e-1468.89Show/hide
Query:  MASRSFVVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVVAPSMPPSSIAGTPVEAPAPAASGAGFATGLGVARSMAVGVGIFAAALF
        MASRSF+V LL++ALVAS A AGHHH+H KSPAPAPSP V  A   P    A +PV APAPA SGAG   G G A SMAVGVGIFAAALF
Subjt:  MASRSFVVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVVAPSMPPSSIAGTPVEAPAPAASGAGFATGLGVARSMAVGVGIFAAALF

XP_023554722.1 uncharacterized protein LOC111811901 [Cucurbita pepo subsp. pepo]7.3e-1670Show/hide
Query:  MASRSFVVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVVAPSMPPSSIAGTPVEAPAPAASGAGFATGLGVARSMAVGVGIFAAALF
        MASRSF+V+LL++ALVAS A AGHHH+H KSPAPAPSP V  AP  P    A +PV APAPA SGAG   G G A SMAVGVGIFAAALF
Subjt:  MASRSFVVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVVAPSMPPSSIAGTPVEAPAPAASGAGFATGLGVARSMAVGVGIFAAALF

TrEMBL top hitse value%identityAlignment
A0A0A0K427 Uncharacterized protein7.1e-2583.7Show/hide
Query:  MASRSFVVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVVAPSMPPSSIAGTPVEAPAPAASGAGFATGLGVARSMAVGVGI-FAAALFV
        MASRSF+VLLLVLALVASSATAGHHHSHPKSPAPAPSPAVV APS+PPSSI+GTPVEAPAPAA+GAG  +G     SMAV VGI FAAALFV
Subjt:  MASRSFVVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVVAPSMPPSSIAGTPVEAPAPAASGAGFATGLGVARSMAVGVGI-FAAALFV

A0A6J1GLJ6 STE20/SPS1-related proline-alanine-rich protein kinase-like5.1e-1568.89Show/hide
Query:  MASRSFVVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVVAPSMPPSSIAGTPVEAPAPAASGAGFATGLGVARSMAVGVGIFAAALF
        MASRSF+V LL++ALVAS A AGHHH+H KSPAPAPSP V  A   P    A +PV APAPA SGAG   G G A SMAVGVGIFAAALF
Subjt:  MASRSFVVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVVAPSMPPSSIAGTPVEAPAPAASGAGFATGLGVARSMAVGVGIFAAALF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAGAAGCTTCGTTGTTCTTCTTCTAGTCCTCGCTTTGGTTGCTTCTTCGGCTACGGCAGGGCATCATCATTCACACCCGAAGTCGCCGGCACCTGCACCGTC
TCCGGCCGTTGTGGTAGCTCCGTCGATGCCGCCGTCTTCGATTGCCGGAACTCCTGTTGAGGCGCCTGCACCGGCGGCGAGTGGCGCTGGTTTTGCTACTGGACTTGGTG
TTGCTCGATCAATGGCTGTTGGTGTTGGGATCTTTGCTGCTGCTTTGTTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
CAAATCTAACGGCATAATCTCTTCCCCTGCTCCTTTATAAATTCCCTTCCCTTTCCCCTTCCCTTCCACCAAACAGAATCAAATCGTCTTGCTCTAATTTTCTTCTCTGT
TAAAATATTCTTAAAATTCTTCAAAATCAAAATCCATCCCTCTCTTCCAATGGCTTCCAGAAGCTTCGTTGTTCTTCTTCTAGTCCTCGCTTTGGTTGCTTCTTCGGCTA
CGGCAGGGCATCATCATTCACACCCGAAGTCGCCGGCACCTGCACCGTCTCCGGCCGTTGTGGTAGCTCCGTCGATGCCGCCGTCTTCGATTGCCGGAACTCCTGTTGAG
GCGCCTGCACCGGCGGCGAGTGGCGCTGGTTTTGCTACTGGACTTGGTGTTGCTCGATCAATGGCTGTTGGTGTTGGGATCTTTGCTGCTGCTTTGTTTGTTTAGATTTT
TTTTGTTCTTTTAAATTTTTGTTTTTATTTATGGTGGGATTTGGTTATTTGTTTTATCATATTTATTCGATTTTTATTATTGTTTTATATCACAAATTAGATTATGATTA
TTAGATTCAGCCTTGCTTTCTGTTTTTCATGTTTTAAGTTTGATTTTGATTCATTTCGTTCGAGTAATTAATTTCAGACTGATAGCTTGGTTAAGCTCAAAATAGGTTAT
CTTTTTCCATTACTATTGATCCACATGGAAATAGACTTTTTCAATAACAACAACAACAATAATAATAATAATATTTATTTGTTTTTTTTT
Protein sequenceShow/hide protein sequence
MASRSFVVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVVAPSMPPSSIAGTPVEAPAPAASGAGFATGLGVARSMAVGVGIFAAALFV