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Clc09G17670 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G17670
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:29151310..29152001
RNA-Seq ExpressionClc09G17670
SyntenyClc09G17670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571864.1 hypothetical protein SDJN03_28592, partial [Cucurbita argyrosperma subsp. sororia]8.2e-1459.38Show/hide
Query:  MPRSTLLIAFVGTLLLSSLGS-----SSSSIMVSRKLLASNFPGFPDLNMPPFYPEFKLPPPFTFFGPNTPS-------SSFPNFPFFSPPINPSP
        M R  +LIA V TL LSS  S     SSSS++VSRKLLA      PD+ +PP  P F LPPPF+FFGPNTPS       SSFPNFPFF PP NPSP
Subjt:  MPRSTLLIAFVGTLLLSSLGS-----SSSSIMVSRKLLASNFPGFPDLNMPPFYPEFKLPPPFTFFGPNTPS-------SSFPNFPFFSPPINPSP
KGN43761.1 hypothetical protein Csa_017175 [Cucumis sativus]1.0e-2782.76Show/hide
Query:  MPRSTLLIAFVGTLLLSSL---GSSSSSIMVSRKLLASNFPGFPDLNMPPFYPEFKLPPPFTFFGPNTPSSSFPNFPFFSPPINPSP
        M R TLLIAFV TLLLSSL    SSSSSI+VSRKLLAS+FPG PD N+PPFYPEFKLPPPF+FFGPNTPSS FPNFPFFSPP NPSP
Subjt:  MPRSTLLIAFVGTLLLSSL---GSSSSSIMVSRKLLASNFPGFPDLNMPPFYPEFKLPPPFTFFGPNTPSSSFPNFPFFSPPINPSP
TrEMBL top hitse value%identityAlignment
A0A0A0K7G8 Uncharacterized protein4.8e-2882.76Show/hide
Query:  MPRSTLLIAFVGTLLLSSL---GSSSSSIMVSRKLLASNFPGFPDLNMPPFYPEFKLPPPFTFFGPNTPSSSFPNFPFFSPPINPSP
        M R TLLIAFV TLLLSSL    SSSSSI+VSRKLLAS+FPG PD N+PPFYPEFKLPPPF+FFGPNTPSS FPNFPFFSPP NPSP
Subjt:  MPRSTLLIAFVGTLLLSSL---GSSSSSIMVSRKLLASNFPGFPDLNMPPFYPEFKLPPPFTFFGPNTPSSSFPNFPFFSPPINPSP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGTTCTACTCTTCTCATTGCTTTTGTTGGAACATTGCTTCTTTCAAGCTTGGGTTCTTCTTCTTCCTCCATTATGGTATCTCGCAAGCTTTTGGCTTCAAATTT
TCCAGGGTTTCCTGATCTGAATATGCCACCATTTTACCCTGAATTCAAATTGCCTCCTCCATTTACATTTTTTGGCCCCAATACTCCTTCTTCCTCCTTTCCCAACTTTC
CATTTTTCTCTCCACCCATTAATCCTTCCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ACTCAAACCACACTATCATATTCTATCTACAATGCCTCGTTCTACTCTTCTCATTGCTTTTGTTGGAACATTGCTTCTTTCAAGCTTGGGTTCTTCTTCTTCCTCCATTA
TGGTATCTCGCAAGCTTTTGGCTTCAAATTTTCCAGGGTTTCCTGATCTGAATATGCCACCATTTTACCCTGAATTCAAATTGCCTCCTCCATTTACATTTTTTGGCCCC
AATACTCCTTCTTCCTCCTTTCCCAACTTTCCATTTTTCTCTCCACCCATTAATCCTTCCCCTTGACCAAAACTATAAAGCTTAATTATTAATTCTCTAATAAAACCTCT
CTCTTCTTTCCCTCTCTTTCTATGTGGGTCATTAGTGGAATTGTTATGGATCAAATAAGTTTTGAATGAAGCTCAAGAGGAGGGCTCTCTTTATATGTAATTCCCAGAAA
CAGGGTGTGAAAGTACACATTTGATTCCATGCATGTGTGTCTCTCTCACTCTTTCCTGTTTATTGGTGTGGAATAAAGATATGTTATTATTATGGAATAAGAATTTTATA
TTTTTATGCAAAACTACCCTTTATACACTTGATATCTCTCTCCCTCTTTTGTGGTTAATTATGATAATGTTTTGCTTCCTTTTGAAACTAAAGTAGTGTTCTTCTCCACG
TGGGATTAATTAAATGATTGTATCAATTTAAA
Protein sequenceShow/hide protein sequence
MPRSTLLIAFVGTLLLSSLGSSSSSIMVSRKLLASNFPGFPDLNMPPFYPEFKLPPPFTFFGPNTPSSSFPNFPFFSPPINPSP