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Clc09G17800 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G17800
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:29554928..29561973
RNA-Seq ExpressionClc09G17800
SyntenyClc09G17800
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031457.1 uncharacterized protein E6C27_scaffold139G002150 [Cucumis melo var. makuwa]7.7e-5670.31Show/hide
Query:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRP---VSEPPQ-TSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEAS---TSTSTFFYFPGW
        MSSKFG+ WRT+LLQLF   D S+    +  HRP   VSEP Q +SS+AMV      FGSTTY+SSLLRSY  R R   +K E      S+STFF+FP W
Subjt:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRP---VSEPPQ-TSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEAS---TSTSTFFYFPGW

Query:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKM
        AKWIFG+LLSLLVP+WN LQ +EDEAEMV+EE ENVAEVVEKVAELTEKVS EI+ KLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHK+
Subjt:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKM

XP_008455165.1 PREDICTED: uncharacterized protein LOC103495399 [Cucumis melo]2.0e-5670.47Show/hide
Query:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRP---VSEPPQ-TSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEAS---TSTSTFFYFPGW
        MSSKFG+ WRT+LLQLF   D S+    +  HRP   VSEP Q +SS+AMV      FGSTTY+SSLLRSY  R R   +K E      S+STFF+FP W
Subjt:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRP---VSEPPQ-TSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEAS---TSTSTFFYFPGW

Query:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME
        AKWIFG+LLSLLVP+WN LQ +EDEAEMV+EE ENVAEVVEKVAELTEKVS EI+ KLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHK+E
Subjt:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME

XP_011658811.1 uncharacterized protein LOC105436091 [Cucumis sativus]6.3e-5866.05Show/hide
Query:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRPVSEPPQ------TSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRY-----DQKKDEASTSTSTFFY
        MSSKFG+ WRTLLLQLF   D S+        R VSEP Q      +SS+AMVP     FGSTTYMSSLLRSYC R  +     ++ KDE   S STFF+
Subjt:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRPVSEPPQ------TSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRY-----DQKKDEASTSTSTFFY

Query:  F--PGWAKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME-
        F  P WAKWIFG+LLSLLVP+WNKLQ +EDEAEMVIEEAENVAEVVEKVAELTEKVS +I  KLPEKSKLKEAA+VVE+YSKEIAHDAHLTQDILHK+E 
Subjt:  F--PGWAKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME-

Query:  -LILLDAASYETNSP
          + +D +  +TN P
Subjt:  -LILLDAASYETNSP

XP_023554721.1 uncharacterized protein LOC111811900 isoform X2 [Cucurbita pepo subsp. pepo]2.2e-4763.73Show/hide
Query:  MSSKFGNFW-------RTLLLQLFHNIDTSAPGRGLTCHRPVSEPPQTSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEASTSTSTFFYFPGW
        MSS  G+FW       RTLLLQL H IDTSAP  G    RPVSEPPQ+SS+A+VP+   SFG    +SSLLRSYC R                       
Subjt:  MSSKFGNFW-------RTLLLQLFHNIDTSAPGRGLTCHRPVSEPPQTSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEASTSTSTFFYFPGW

Query:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME
        AKWIFGSLLSLLVPSWNK Q LEDEAE VIEEAEN AEVVEKVAELTEKVS EI   LPEKSK+KEAA+VVE YSKEIAH A L Q ILHK+E
Subjt:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME

XP_038888803.1 uncharacterized protein LOC120078589 [Benincasa hispida]5.5e-7080.11Show/hide
Query:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRPVSEPPQTSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEASTSTSTFFYFPGWAKWIFGS
        MSSKFG+FWRTLL QLFH  DTSAP  G  C R VSEPPQTSS+ MV F     GSTTY SSLLR YCSRMR+ Q+KD+   STSTFF+FPGWAKW+FGS
Subjt:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRPVSEPPQTSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEASTSTSTFFYFPGWAKWIFGS

Query:  LLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME
        LLSLLVPSWN+L+TLEDEAEMVIEEAENVA+VVE+VAELTEKVS EIA KLPEKSKLKEAAQVVENYSKE+AHDAHLTQDILHK+E
Subjt:  LLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME

TrEMBL top hitse value%identityAlignment
A0A0A0K622 Uncharacterized protein3.0e-5866.05Show/hide
Query:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRPVSEPPQ------TSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRY-----DQKKDEASTSTSTFFY
        MSSKFG+ WRTLLLQLF   D S+        R VSEP Q      +SS+AMVP     FGSTTYMSSLLRSYC R  +     ++ KDE   S STFF+
Subjt:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRPVSEPPQ------TSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRY-----DQKKDEASTSTSTFFY

Query:  F--PGWAKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME-
        F  P WAKWIFG+LLSLLVP+WNKLQ +EDEAEMVIEEAENVAEVVEKVAELTEKVS +I  KLPEKSKLKEAA+VVE+YSKEIAHDAHLTQDILHK+E 
Subjt:  F--PGWAKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME-

Query:  -LILLDAASYETNSP
          + +D +  +TN P
Subjt:  -LILLDAASYETNSP

A0A1S3C099 uncharacterized protein LOC1034953999.8e-5770.47Show/hide
Query:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRP---VSEPPQ-TSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEAS---TSTSTFFYFPGW
        MSSKFG+ WRT+LLQLF   D S+    +  HRP   VSEP Q +SS+AMV      FGSTTY+SSLLRSY  R R   +K E      S+STFF+FP W
Subjt:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRP---VSEPPQ-TSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEAS---TSTSTFFYFPGW

Query:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME
        AKWIFG+LLSLLVP+WN LQ +EDEAEMV+EE ENVAEVVEKVAELTEKVS EI+ KLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHK+E
Subjt:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME

A0A5A7SPP8 Uncharacterized protein3.7e-5670.31Show/hide
Query:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRP---VSEPPQ-TSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEAS---TSTSTFFYFPGW
        MSSKFG+ WRT+LLQLF   D S+    +  HRP   VSEP Q +SS+AMV      FGSTTY+SSLLRSY  R R   +K E      S+STFF+FP W
Subjt:  MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRP---VSEPPQ-TSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEAS---TSTSTFFYFPGW

Query:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKM
        AKWIFG+LLSLLVP+WN LQ +EDEAEMV+EE ENVAEVVEKVAELTEKVS EI+ KLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHK+
Subjt:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKM

A0A6J1GN56 uncharacterized protein LOC111455450 isoform X23.3e-4460.62Show/hide
Query:  MSSKFGNFW-------RTLLLQLFHNIDTSAPGRGLTCHRPVSEPPQTSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEASTSTSTFFYFPGW
        MSS  G+FW       RTLLLQL + I+TSAP  G    RPVSEPPQ+SS+A+VP+   SFG    +SSLLRS+C R                       
Subjt:  MSSKFGNFW-------RTLLLQLFHNIDTSAPGRGLTCHRPVSEPPQTSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEASTSTSTFFYFPGW

Query:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME
        AKWIFGSLLSLLVPSWNK Q  EDEAE +IEEAENVAEVVEKVAELTEKVS EI  K+ E+SK+KEAA+VVE YSKEIAH A L Q ILHK+E
Subjt:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME

A0A6J1I3G6 uncharacterized protein LOC1114706511.7e-4561.14Show/hide
Query:  MSSKFGNFW-------RTLLLQLFHNIDTSAPGRGLTCHRPVSEPPQTSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEASTSTSTFFYFPGW
        MSS  G+FW       R+LLLQL H I+TSAP  G    RPVSEPPQ+SS+A+VP+   SFG    +SSLLRSYC R                       
Subjt:  MSSKFGNFW-------RTLLLQLFHNIDTSAPGRGLTCHRPVSEPPQTSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEASTSTSTFFYFPGW

Query:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME
        AKWIFGSLLSL VPSWNK Q LEDEAE  IEEAE+VAEVVEKVAELTEKVS EI  KLPEKS++K+AA+ VE YSKEIAHDA L Q ILHK+E
Subjt:  AKWIFGSLLSLLVPSWNKLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKME

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G14095.1 unknown protein1.8e-2345.19Show/hide
Query:  YCSRMRYDQKKDEASTSTSTFFYFPGWAKWIFGSLLSLLVPSWN-----KLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAA
        Y S +  D K     +  + +F FP W +W+ GS +SL++  WN     KL+ +E EAE+V+E  E VAE+VEKVA  T++++ E+A KLPEK+KLK+ A
Subjt:  YCSRMRYDQKKDEASTSTSTFFYFPGWAKWIFGSLLSLLVPSWN-----KLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAA

Query:  QVVENYSKEIAHDAHLTQDILHKMELILLDAASYE
         V+E+ S+  AH+AHLTQD LHK+E +  D    E
Subjt:  QVVENYSKEIAHDAHLTQDILHKMELILLDAASYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCTAAATTTGGTAATTTCTGGAGAACCTTGCTTCTTCAACTTTTTCATAACATAGACACCTCCGCCCCAGGCCGCGGTTTGACCTGTCATCGTCCGGTATCTGA
GCCCCCGCAGACCTCCTCTCTAGCCATGGTTCCGTTTAGGCTAAGTTCGTTTGGTTCCACAACTTATATGTCGTCCCTCCTCAGATCCTATTGTTCCAGGATGAGATATG
ACCAGAAAAAGGATGAGGCATCAACATCAACATCAACATTTTTCTACTTCCCTGGTTGGGCAAAATGGATTTTTGGCTCCCTATTGTCCCTCTTGGTACCCAGTTGGAAT
AAATTGCAAACCCTTGAAGATGAAGCTGAAATGGTGATCGAAGAGGCAGAAAATGTAGCAGAAGTAGTAGAAAAGGTAGCAGAATTAACAGAGAAGGTATCAGTAGAAAT
TGCTAACAAACTTCCTGAAAAGAGTAAGCTTAAAGAGGCAGCACAAGTTGTAGAAAACTATTCAAAGGAAATTGCCCATGATGCTCACCTAACACAAGATATCCTTCATA
AGATGGAGCTCATTCTTTTGGATGCTGCATCCTATGAGACCAATTCGCCAACTCTTTTCATATGGCTCGGAGCCATTCTCGCTGTCACTGTCTATCTAAATGACCTCAGG
TTTTATCTCCAAGTCACTTGCTCAGAAACCCGACGTAACCATTCTCTCAATTTGTGGGTTGCATCGTTAAAGTTTCATTGTGCCATAACTTGGGTTTGGACTTTAATTTC
GGCTCTCAGCTGGGTGATCTCCTCCTTCAGTGAACGGAGATTGTCCTGTAGGATGCTAACATTTGCCTTAATAGCATCTTGA
mRNA sequenceShow/hide mRNA sequence
AAATAATCCTTTTGCGTGTAGCCATATTATTCATCCACTATCATTACCATCTTCAAAACACACAAATAATTCCTCTACTTGTTGAATGTTGAGACTTTAATTCTCGTTGT
ATTTTCATCCGCTGTGTCGTCTTTGGAGATCTTCAATTCTTCACCCTAAAAGCCCTCTGCCCGACATGTCGTCTAAATTTGGTAATTTCTGGAGAACCTTGCTTCTTCAA
CTTTTTCATAACATAGACACCTCCGCCCCAGGCCGCGGTTTGACCTGTCATCGTCCGGTATCTGAGCCCCCGCAGACCTCCTCTCTAGCCATGGTTCCGTTTAGGCTAAG
TTCGTTTGGTTCCACAACTTATATGTCGTCCCTCCTCAGATCCTATTGTTCCAGGATGAGATATGACCAGAAAAAGGATGAGGCATCAACATCAACATCAACATTTTTCT
ACTTCCCTGGTTGGGCAAAATGGATTTTTGGCTCCCTATTGTCCCTCTTGGTACCCAGTTGGAATAAATTGCAAACCCTTGAAGATGAAGCTGAAATGGTGATCGAAGAG
GCAGAAAATGTAGCAGAAGTAGTAGAAAAGGTAGCAGAATTAACAGAGAAGGTATCAGTAGAAATTGCTAACAAACTTCCTGAAAAGAGTAAGCTTAAAGAGGCAGCACA
AGTTGTAGAAAACTATTCAAAGGAAATTGCCCATGATGCTCACCTAACACAAGATATCCTTCATAAGATGGAGCTCATTCTTTTGGATGCTGCATCCTATGAGACCAATT
CGCCAACTCTTTTCATATGGCTCGGAGCCATTCTCGCTGTCACTGTCTATCTAAATGACCTCAGGTTTTATCTCCAAGTCACTTGCTCAGAAACCCGACGTAACCATTCT
CTCAATTTGTGGGTTGCATCGTTAAAGTTTCATTGTGCCATAACTTGGGTTTGGACTTTAATTTCGGCTCTCAGCTGGGTGATCTCCTCCTTCAGTGAACGGAGATTGTC
CTGTAGGATGCTAACATTTGCCTTAATAGCATCTTGA
Protein sequenceShow/hide protein sequence
MSSKFGNFWRTLLLQLFHNIDTSAPGRGLTCHRPVSEPPQTSSLAMVPFRLSSFGSTTYMSSLLRSYCSRMRYDQKKDEASTSTSTFFYFPGWAKWIFGSLLSLLVPSWN
KLQTLEDEAEMVIEEAENVAEVVEKVAELTEKVSVEIANKLPEKSKLKEAAQVVENYSKEIAHDAHLTQDILHKMELILLDAASYETNSPTLFIWLGAILAVTVYLNDLR
FYLQVTCSETRRNHSLNLWVASLKFHCAITWVWTLISALSWVISSFSERRLSCRMLTFALIAS