; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G17840 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G17840
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionperiaxin-like
Genome locationClcChr09:29610931..29611407
RNA-Seq ExpressionClc09G17840
SyntenyClc09G17840
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044659 - Protein PELPK-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136892.1 protein PELPK1-like [Cucumis sativus]5.1e-4969.41Show/hide
Query:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEV-SN
        M+V AR+LLE  +P  PE LPKPEIPTLPK ELPPLPKVELP L HLPPLEKPKV EL KPELPKLPELPKVPN D SK+PEIP++PKFD PK +EV  +
Subjt:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEV-SN

Query:  LSKPELPKLSKLPNVSKPEIPKLLEF-----------PKLPPLPKPILPVLPKDLPSPSFNPPHNTTTKP
        L KPELPKL +LPN+ KPE+PKL E            P+LP LPKP+LP LPKD+P PSFNPPH TTT P
Subjt:  LSKPELPKLSKLPNVSKPEIPKLLEF-----------PKLPPLPKPILPVLPKDLPSPSFNPPHNTTTKP

XP_008455138.1 PREDICTED: periaxin-like [Cucumis melo]4.2e-5168.31Show/hide
Query:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSN-
        MT  AR+LLE  LPKVPEELPK EIPTL KPELPPLPK ELP L HLPPLEKPK+ ELSKPELPKLPELPKVPNLDLSK+P++PS+PKFD PK SEVSN 
Subjt:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSN-

Query:  ----------LS---KPELPKLSKLPNVSKPEIPKLLEFPKLP-----------PLPKPILPVLPKDLPSPSFNPPHNTTTKP
                  LS   KPELPKL +LPNV KPE+PKL E P +P           PLPKP+LP LPKD+P PSFNPPH TT+ P
Subjt:  ----------LS---KPELPKLSKLPNVSKPEIPKLLEFPKLP-----------PLPKPILPVLPKDLPSPSFNPPHNTTTKP

XP_008455139.1 PREDICTED: periaxin-like [Cucumis melo]3.4e-5372.35Show/hide
Query:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVS-N
        M+V AR+LLE  LP VPEELPKPEIPTLPKPELPPLPKVELP L HLPPLEKPKV EL KPELPKLPELPKVPN D SK+PE+P++PKFD PK +EVS +
Subjt:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVS-N

Query:  LSKPELPKLSKLPNVSKPEIPKLLE-----------FPKLPPLPKPILPVLPKDLPSPSFNPPHNTTTKP
        L KPELPKL +LP+V KPE+PKL E            P+LPPLPKP+LP LPKD+P PSFNPPH TTT P
Subjt:  LSKPELPKLSKLPNVSKPEIPKLLE-----------FPKLPPLPKPILPVLPKDLPSPSFNPPHNTTTKP

XP_011658824.1 protein PELPK1-like [Cucumis sativus]1.9e-4872.15Show/hide
Query:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNL
        MT  AR+LLE  LPKVPEELPKPE+PTLPKP+LPPLPK ELP L HLPPLEKPK+ EL K ELPK PELPKVP+ DLSK+PE+PSLPKFD  K  EVSN 
Subjt:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNL

Query:  SKPELPKLSKLPNVSKPEIPKLLEFPKLPPLPKPILPVLPKDLPSPSFNPPHNTTTKP
         K ELPKL +LPNV KPE+PKL   P+LP LPKP+LP LPKD+  PSF+PPH TT+ P
Subjt:  SKPELPKLSKLPNVSKPEIPKLLEFPKLPPLPKPILPVLPKDLPSPSFNPPHNTTTKP

XP_038888721.1 protein PELPK1-like [Benincasa hispida]1.6e-4768.67Show/hide
Query:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNL
        MTV AR+LLE  LPKVPE+LPKP+IPTL KPELPPLPKVELP L HLPP EKPKV E  KPELPK  ELP+V  LDL K PE+PSLPKFD PK SE SNL
Subjt:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNL

Query:  SKPELPKLSKLPNVSKPEI-----------PKLLEFPKLPPLPKPILPVLPKDLPSPSFNPPHNTT
         K ELPKL +LPNV KPE+           P+L + P+LPPLPKPILP +PKD+P PS NPPH TT
Subjt:  SKPELPKLSKLPNVSKPEI-----------PKLLEFPKLPPLPKPILPVLPKDLPSPSFNPPHNTT

TrEMBL top hitse value%identityAlignment
A0A1S3C077 periaxin-like2.0e-5168.31Show/hide
Query:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSN-
        MT  AR+LLE  LPKVPEELPK EIPTL KPELPPLPK ELP L HLPPLEKPK+ ELSKPELPKLPELPKVPNLDLSK+P++PS+PKFD PK SEVSN 
Subjt:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSN-

Query:  ----------LS---KPELPKLSKLPNVSKPEIPKLLEFPKLP-----------PLPKPILPVLPKDLPSPSFNPPHNTTTKP
                  LS   KPELPKL +LPNV KPE+PKL E P +P           PLPKP+LP LPKD+P PSFNPPH TT+ P
Subjt:  ----------LS---KPELPKLSKLPNVSKPEIPKLLEFPKLP-----------PLPKPILPVLPKDLPSPSFNPPHNTTTKP

A0A1S3C0Y7 periaxin-like1.6e-5372.35Show/hide
Query:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVS-N
        M+V AR+LLE  LP VPEELPKPEIPTLPKPELPPLPKVELP L HLPPLEKPKV EL KPELPKLPELPKVPN D SK+PE+P++PKFD PK +EVS +
Subjt:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVS-N

Query:  LSKPELPKLSKLPNVSKPEIPKLLE-----------FPKLPPLPKPILPVLPKDLPSPSFNPPHNTTTKP
        L KPELPKL +LP+V KPE+PKL E            P+LPPLPKP+LP LPKD+P PSFNPPH TTT P
Subjt:  LSKPELPKLSKLPNVSKPEIPKLLE-----------FPKLPPLPKPILPVLPKDLPSPSFNPPHNTTTKP

A0A5A7SML8 Periaxin-like1.6e-5372.35Show/hide
Query:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVS-N
        M+V AR+LLE  LP VPEELPKPEIPTLPKPELPPLPKVELP L HLPPLEKPKV EL KPELPKLPELPKVPN D SK+PE+P++PKFD PK +EVS +
Subjt:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVS-N

Query:  LSKPELPKLSKLPNVSKPEIPKLLE-----------FPKLPPLPKPILPVLPKDLPSPSFNPPHNTTTKP
        L KPELPKL +LP+V KPE+PKL E            P+LPPLPKP+LP LPKD+P PSFNPPH TTT P
Subjt:  LSKPELPKLSKLPNVSKPEIPKLLE-----------FPKLPPLPKPILPVLPKDLPSPSFNPPHNTTTKP

A0A5A7SPG9 Periaxin-like2.0e-5168.31Show/hide
Query:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSN-
        MT  AR+LLE  LPKVPEELPK EIPTL KPELPPLPK ELP L HLPPLEKPK+ ELSKPELPKLPELPKVPNLDLSK+P++PS+PKFD PK SEVSN 
Subjt:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSN-

Query:  ----------LS---KPELPKLSKLPNVSKPEIPKLLEFPKLP-----------PLPKPILPVLPKDLPSPSFNPPHNTTTKP
                  LS   KPELPKL +LPNV KPE+PKL E P +P           PLPKP+LP LPKD+P PSFNPPH TT+ P
Subjt:  ----------LS---KPELPKLSKLPNVSKPEIPKLLEFPKLP-----------PLPKPILPVLPKDLPSPSFNPPHNTTTKP

A0A6J1CK42 periaxin-like1.1e-4663.39Show/hide
Query:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNL--------------DLSKLPEIPSL
        MT+ AR+LLE   PK+PEELPKPEIPTLP PEL PLPKVELP L HLPPLEKPK+ ELSKPELPKLPELP VP                DL K PEIP +
Subjt:  MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNL--------------DLSKLPEIPSL

Query:  PKFDTPKPSEVSNLSKPELPKLSKLPNVSKPEIPK-----------LLEFPKLPPLPKPILPVLPKDLPSPSFNPPHNTTTKP
        PK D  K SEVSNL KPELPKL+ LPNV K E+PK           L + P++PPLPKP+ P LPKD+P PSFNPPH TTT P
Subjt:  PKFDTPKPSEVSNLSKPELPKLSKLPNVSKPEIPK-----------LLEFPKLPPLPKPILPVLPKDLPSPSFNPPHNTTTKP

SwissProt top hitse value%identityAlignment
O55103 Periaxin1.8e-0434.85Show/hide
Query:  EMSLPKVPE------ELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPE--LPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNLS
        E+ LPK+PE       LP+ ++P + + +LP +P++ +P +  LP ++ PKV ++  PE+ KLPE  LPKVP++    +P++P LP+   PK   VS++ 
Subjt:  EMSLPKVPE------ELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPE--LPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNLS

Query:  KPELPKLSKLPNVSKPEIPKLLEFPKLPPLPK
         PE+ ++S++P V  P++P+ ++  K+P + +
Subjt:  KPELPKLSKLPNVSKPEIPKLLEFPKLPPLPK

P27951 IgA FC receptor3.2e-0641.98Show/hide
Query:  ELPKPEIPTLPK-PELPPLPKV-ELPSLSHLPPLEKPKVLELSK-PELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNL-SKPELPKLSKLPNV
        E   PE P  PK PELP  P   + P   H+P  E PK  E  + PE PK PE P VP  +  K PE P +P  ++PK  E  ++   P+ P+  K+P  
Subjt:  ELPKPEIPTLPK-PELPPLPKV-ELPSLSHLPPLEKPKVLELSK-PELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNL-SKPELPKLSKLPNV

Query:  SK-PEIPKLLEFPKLPPLPK-PILPVLPKDL
         K P++PKL + PKLP +PK P  P LP  L
Subjt:  SK-PEIPKLLEFPKLPPLPK-PILPVLPKDL

Q63425 Periaxin3.0e-0431.52Show/hide
Query:  EMSLPKVPE------ELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELP-------KLPE--LPKVPNLDLS--KLPEIPSLPKFDTP
        E+ LPK+P+       LP+ ++P + + +LP +P + +P +  LP ++ PKV EL  P++P       +LPE  LPKVP++ L   KLP++P +   D P
Subjt:  EMSLPKVPE------ELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELP-------KLPE--LPKVPNLDLS--KLPEIPSLPKFDTP

Query:  KPSEVSNLSKPELPKLSKLPNVSKPEIPKLLEFPKLPPLPKPILPVLPKDLPSPSFNPPHNTTTK
         P       + +LPK+ ++P+V  P++P+ ++ PK+P   +        +    SF  P  T  K
Subjt:  KPSEVSNLSKPELPKLSKLPNVSKPEIPKLLEFPKLPPLPKPILPVLPKDLPSPSFNPPHNTTTK

Q9LXB7 Protein PELPK21.8e-1245.37Show/hide
Query:  MTVGARYLLEMSLPKVP--EELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVS
        ++VGAR LLE   P++P   ELPKPE+     P+LP  PK+ELP L  +P  E PK+ E+ KPELP  PELPK+P       P++P LPK   P+ ++V 
Subjt:  MTVGARYLLEMSLPKVP--EELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVS

Query:  NLSKPELP
          + P+ P
Subjt:  NLSKPELP

Q9LXB8 Protein PELPK11.9e-2246.43Show/hide
Query:  LPKVPEELPKPEIPTLPK------PELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNLSKPELP
        LPK PE   KPE+P L +      P++P +PK ELP L  +P LE PKV E+ KPELPK+PELPK+P +   +LP++P +PK + PK  E+     P++P
Subjt:  LPKVPEELPKPEIPTLPK------PELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNLSKPELP

Query:  KLSKLPNVSKPEIPKL-----LEFPKLPPLPKPILPVLPK
        +L K+P + KPE+PK+      E PK+P +PKP LP +P+
Subjt:  KLSKLPNVSKPEIPKL-----LEFPKLPPLPKPILPVLPK

Arabidopsis top hitse value%identityAlignment
AT5G09520.1 hydroxyproline-rich glycoprotein family protein1.3e-1345.37Show/hide
Query:  MTVGARYLLEMSLPKVP--EELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVS
        ++VGAR LLE   P++P   ELPKPE+     P+LP  PK+ELP L  +P  E PK+ E+ KPELP  PELPK+P       P++P LPK   P+ ++V 
Subjt:  MTVGARYLLEMSLPKVP--EELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVS

Query:  NLSKPELP
          + P+ P
Subjt:  NLSKPELP

AT5G09530.1 hydroxyproline-rich glycoprotein family protein1.3e-2346.43Show/hide
Query:  LPKVPEELPKPEIPTLPK------PELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNLSKPELP
        LPK PE   KPE+P L +      P++P +PK ELP L  +P LE PKV E+ KPELPK+PELPK+P +   +LP++P +PK + PK  E+     P++P
Subjt:  LPKVPEELPKPEIPTLPK------PELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNLSKPELP

Query:  KLSKLPNVSKPEIPKL-----LEFPKLPPLPKPILPVLPK
        +L K+P + KPE+PK+      E PK+P +PKP LP +P+
Subjt:  KLSKLPNVSKPEIPKL-----LEFPKLPPLPKPILPVLPK

AT5G15780.1 Pollen Ole e 1 allergen and extensin family protein5.3e-0437.31Show/hide
Query:  PKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNLSKPELPKLSKLPNVSKPEIP
        P P IP++P P LPP P +  PS   LPP+     L  + P LP +P LP  P   L  +P IP+LP      P  + N   P LP       V  P +P
Subjt:  PKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNLSKPELPKLSKLPNVSKPEIP

Query:  KLLEFPKLPPLPK-PILPVLPKDLP-SPSFNPPH
         L   P +P +P  P  P++P   P SPSF+  H
Subjt:  KLLEFPKLPPLPK-PILPVLPKDLP-SPSFNPPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTGGGTGCAAGATATCTTTTAGAGATGTCATTACCTAAGGTGCCCGAAGAGCTTCCAAAACCAGAAATACCAACTTTGCCAAAGCCTGAGCTTCCTCCACTACC
AAAGGTTGAATTACCTTCATTATCTCACCTTCCACCGTTGGAAAAGCCTAAAGTGCTTGAATTGTCTAAGCCTGAACTCCCGAAGTTGCCTGAATTACCAAAAGTACCTA
ATCTTGATCTCTCCAAACTTCCTGAAATTCCAAGCTTGCCTAAGTTTGATACTCCCAAACCATCTGAAGTTTCAAATCTATCAAAACCTGAGCTCCCAAAATTATCTAAA
TTACCAAATGTGTCTAAACCTGAGATTCCTAAATTACTAGAATTCCCTAAACTACCTCCCCTCCCAAAGCCAATTTTGCCTGTCCTTCCAAAAGATTTGCCTTCTCCTTC
TTTTAACCCACCTCACAACACCACAACGAAACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGTGGGTGCAAGATATCTTTTAGAGATGTCATTACCTAAGGTGCCCGAAGAGCTTCCAAAACCAGAAATACCAACTTTGCCAAAGCCTGAGCTTCCTCCACTACC
AAAGGTTGAATTACCTTCATTATCTCACCTTCCACCGTTGGAAAAGCCTAAAGTGCTTGAATTGTCTAAGCCTGAACTCCCGAAGTTGCCTGAATTACCAAAAGTACCTA
ATCTTGATCTCTCCAAACTTCCTGAAATTCCAAGCTTGCCTAAGTTTGATACTCCCAAACCATCTGAAGTTTCAAATCTATCAAAACCTGAGCTCCCAAAATTATCTAAA
TTACCAAATGTGTCTAAACCTGAGATTCCTAAATTACTAGAATTCCCTAAACTACCTCCCCTCCCAAAGCCAATTTTGCCTGTCCTTCCAAAAGATTTGCCTTCTCCTTC
TTTTAACCCACCTCACAACACCACAACGAAACCTTGA
Protein sequenceShow/hide protein sequence
MTVGARYLLEMSLPKVPEELPKPEIPTLPKPELPPLPKVELPSLSHLPPLEKPKVLELSKPELPKLPELPKVPNLDLSKLPEIPSLPKFDTPKPSEVSNLSKPELPKLSK
LPNVSKPEIPKLLEFPKLPPLPKPILPVLPKDLPSPSFNPPHNTTTKP