; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G18120 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G18120
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionzf-RVT domain-containing protein
Genome locationClcChr09:30155110..30156336
RNA-Seq ExpressionClc09G18120
SyntenyClc09G18120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]2.8e-3148.41Show/hide
Query:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR
        +Q + SIHGKE ++W T GK+  SL+S W++I+R W  + +LASF LGNG +IGF  DPW    P+K  F  LFRIA  P             SW L+FR
Subjt:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR

Query:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK
        R L++EEI  FQSLL L+S++ V  + D   W++E+ G FS KSLS HL  ASP+DK
Subjt:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK

TYK06564.1 hypothetical protein E5676_scaffold453G00250 [Cucumis melo var. makuwa]1.7e-3650.32Show/hide
Query:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR
        +Q V SI+GKE  +WHT GK   SL+S WI IS    KL TL SFKLGNG +I FW+D W  +   +  F  LFR++  P+G V   WD+S+ SWS+ FR
Subjt:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR

Query:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK
        RL KEEEI  FQ LL L+S++ V +++DR  W+L+ S  FS KS   HL+V+SPL++
Subjt:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK

TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]2.4e-3047.77Show/hide
Query:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR
        +Q + SIHGKE ++W T GK+  SL+S W++I+R W  + +LASF LGNG +IGF  DPW    P+K  F  LF IA  P             SW L+FR
Subjt:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR

Query:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK
        R L++EEI  FQSLL L+S++ V  + D   W++E+ G FS KSLS HL  ASP+DK
Subjt:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK

TYK22579.1 hypothetical protein E5676_scaffold584G00340 [Cucumis melo var. makuwa]4.8e-3952.87Show/hide
Query:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR
        +Q + SIHG E ++WHT  K+  SL+S W+SISR W K+  LA FKLGNG ++ FW D W  ++PLK     LF+IA  P G V  HWDS ++SW++ FR
Subjt:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR

Query:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK
        RLLK+EEI  FQSLL L+SS+ + E  D  +W+L+A G +SVKSLS HLS + PL+K
Subjt:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]2.6e-3249.64Show/hide
Query:  GKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFRRLLKEEEIVHFQSLLELI
        GK   SL+S W+SIS+TWLK+  LA+FKLGNG +I FW D W    P    F +LFRI   P+G V DHWD++ +SWS++FRR LK+EE+  FQ LL  I
Subjt:  GKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFRRLLKEEEIVHFQSLLELI

Query:  SSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK
         S+S + + D+ VW++  +  ++VKSL  HL+  SPL+K
Subjt:  SSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK

TrEMBL top hitse value%identityAlignment
A0A5A7T2Y0 zf-RVT domain-containing protein1.4e-3148.41Show/hide
Query:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR
        +Q + SIHGKE ++W T GK+  SL+S W++I+R W  + +LASF LGNG +IGF  DPW    P+K  F  LFRIA  P             SW L+FR
Subjt:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR

Query:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK
        R L++EEI  FQSLL L+S++ V  + D   W++E+ G FS KSLS HL  ASP+DK
Subjt:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK

A0A5D3BQW7 Uncharacterized protein3.4e-3045.45Show/hide
Query:  SIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFRRLLKE
        SIHGK+ +NWH AGK    L+S W+S+SR WLK+  L +F+LGN  ++ FW DPW S++P  ++ P LF IA   +G V D+WD + +SW + F  LLK+
Subjt:  SIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFRRLLKE

Query:  --EEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK
            I+   S  E    KS +E+ D  V +L  SG F+VKS++ HLS + PLDK
Subjt:  --EEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK

A0A5D3C5F2 Uncharacterized protein8.3e-3750.32Show/hide
Query:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR
        +Q V SI+GKE  +WHT GK   SL+S WI IS    KL TL SFKLGNG +I FW+D W  +   +  F  LFR++  P+G V   WD+S+ SWS+ FR
Subjt:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR

Query:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK
        RL KEEEI  FQ LL L+S++ V +++DR  W+L+ S  FS KS   HL+V+SPL++
Subjt:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK

A0A5D3DE60 zf-RVT domain-containing protein1.2e-3047.77Show/hide
Query:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR
        +Q + SIHGKE ++W T GK+  SL+S W++I+R W  + +LASF LGNG +IGF  DPW    P+K  F  LF IA  P             SW L+FR
Subjt:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR

Query:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK
        R L++EEI  FQSLL L+S++ V  + D   W++E+ G FS KSLS HL  ASP+DK
Subjt:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK

A0A5D3DH32 Uncharacterized protein2.3e-3952.87Show/hide
Query:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR
        +Q + SIHG E ++WHT  K+  SL+S W+SISR W K+  LA FKLGNG ++ FW D W  ++PLK     LF+IA  P G V  HWDS ++SW++ FR
Subjt:  KQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWTDPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFR

Query:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK
        RLLK+EEI  FQSLL L+SS+ + E  D  +W+L+A G +SVKSLS HLS + PL+K
Subjt:  RLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACCCTGTGGAAGAATCCTTGTTTCTAGAGGACTTGGACAAGGGGATCTCTATCCCCCTTTCTATTCCTCTTGTTAGCGAGTTTGTGGATGATGACTCTATGCT
AATTACCTTGCGGAGAACAGTTGAATTATTTAAATGGATTTCAGGGCAAAAGCAAGCTGTTAGTAGTATTCATGGGAAAGAAAGATACAATTGGCACACTGCCGGTAAAA
CAAACCTTAGCCTTCAAAGTTCATGGATAAGCATCTCTCGCACTTGGCTAAAGCTGAGCACATTAGCTAGTTTCAAGCTTGGAAACGGGTGCCAGATTGGATTTTGGACC
GACCCTTGGACAAGCCAATTACCTCTAAAAGCAAGCTTCCCAACTCTGTTTAGAATAGCAAATAGGCCAAGTGGCTTAGTTCAAGATCATTGGGATTCCTCATCCTCCTC
TTGGTCATTATCCTTTCGAAGATTATTAAAAGAAGAAGAGATTGTGCATTTTCAATCACTCCTTGAATTGATTTCTTCCAAAAGTGTGAATGAAAATTTGGATAGGCTCG
TCTGGACTTTAGAAGCAAGTGGGTCATTCTCGGTAAAATCCCTTTCAAGGCATTTATCAGTGGCTTCCCCATTAGATAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGACCCTGTGGAAGAATCCTTGTTTCTAGAGGACTTGGACAAGGGGATCTCTATCCCCCTTTCTATTCCTCTTGTTAGCGAGTTTGTGGATGATGACTCTATGCT
AATTACCTTGCGGAGAACAGTTGAATTATTTAAATGGATTTCAGGGCAAAAGCAAGCTGTTAGTAGTATTCATGGGAAAGAAAGATACAATTGGCACACTGCCGGTAAAA
CAAACCTTAGCCTTCAAAGTTCATGGATAAGCATCTCTCGCACTTGGCTAAAGCTGAGCACATTAGCTAGTTTCAAGCTTGGAAACGGGTGCCAGATTGGATTTTGGACC
GACCCTTGGACAAGCCAATTACCTCTAAAAGCAAGCTTCCCAACTCTGTTTAGAATAGCAAATAGGCCAAGTGGCTTAGTTCAAGATCATTGGGATTCCTCATCCTCCTC
TTGGTCATTATCCTTTCGAAGATTATTAAAAGAAGAAGAGATTGTGCATTTTCAATCACTCCTTGAATTGATTTCTTCCAAAAGTGTGAATGAAAATTTGGATAGGCTCG
TCTGGACTTTAGAAGCAAGTGGGTCATTCTCGGTAAAATCCCTTTCAAGGCATTTATCAGTGGCTTCCCCATTAGATAAATAG
Protein sequenceShow/hide protein sequence
MADPVEESLFLEDLDKGISIPLSIPLVSEFVDDDSMLITLRRTVELFKWISGQKQAVSSIHGKERYNWHTAGKTNLSLQSSWISISRTWLKLSTLASFKLGNGCQIGFWT
DPWTSQLPLKASFPTLFRIANRPSGLVQDHWDSSSSSWSLSFRRLLKEEEIVHFQSLLELISSKSVNENLDRLVWTLEASGSFSVKSLSRHLSVASPLDK