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Clc09G18210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G18210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPhloem filament protein
Genome locationClcChr09:30391338..30393428
RNA-Seq ExpressionClc09G18210
SyntenyClc09G18210
Gene Ontology termsGO:0004869 - cysteine-type endopeptidase inhibitor activity (molecular function)
InterPro domainsIPR009994 - Phloem filament PP1
IPR027214 - Cystatin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34265.1 phloem filament protein [Cucumis melo subsp. melo]1.5e-2156.12Show/hide
Query:  CSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDE--NNIRYRLHVHVNDCLRRQLKFMAIVFTQH-NENDEITKTLESFEQL
        CSK+WIK+P V  PC+Q +A++ V+EF  +++ SL YK V+EGWY+ELD+  N IRYRLHV   DCLRR LKF AI+  QH   N+E T TLESF+++
Subjt:  CSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDE--NNIRYRLHVHVNDCLRRQLKFMAIVFTQH-NENDEITKTLESFEQL

KAG6588840.1 hypothetical protein SDJN03_17405, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1644.23Show/hide
Query:  ISLACKNCS-----KRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDENNIRYRLHVHVNDCLRRQLKFMAIVFTQHNENDEITKT
        +S+A K C      ++WIKIPDV + CVQ++AK AV++FN +H  SLKY+ + EGW+ EL +NN++YRLH+   D L+R L + A+VF +  + + I K 
Subjt:  ISLACKNCS-----KRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDENNIRYRLHVHVNDCLRRQLKFMAIVFTQHNENDEITKT

Query:  LESF
        +  F
Subjt:  LESF

TYK06877.1 phloem filament protein [Cucumis melo var. makuwa]3.2e-2152.38Show/hide
Query:  ISLACKNCSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELD--ENNIRYRLHVHVNDCLRRQLKFMAIVFTQH-NENDEITKTLE
        +S     CSK+WIK+P V  PC+Q +A++ V+EF  +++ SL YK V+EGWY+ELD   N +RYRLHV   DCLRR LKF AI+  QH   N+E T TLE
Subjt:  ISLACKNCSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELD--ENNIRYRLHVHVNDCLRRQLKFMAIVFTQH-NENDEITKTLE

Query:  SFEQL
        SF+++
Subjt:  SFEQL

XP_023531643.1 uncharacterized protein LOC111793824 [Cucurbita pepo subsp. pepo]7.0e-1645.54Show/hide
Query:  ISLACKNC-----SKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDENNIRYRLHVHVNDCLRRQLKFMAIVFTQHNENDEITKT
        +S+A K C      ++WIKIPDV   CVQ++AK AV++FN +H  SLKY+ + EGWY EL +NN++YRLH+   D L+R L + A+VF +  + + I K 
Subjt:  ISLACKNC-----SKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDENNIRYRLHVHVNDCLRRQLKFMAIVFTQHNENDEITKT

Query:  L
        +
Subjt:  L

XP_038887119.1 uncharacterized protein LOC120077304 [Benincasa hispida]8.5e-3067.71Show/hide
Query:  CSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDENNIRYRLHVHVNDCLRRQLKFMAIVFTQHNENDEITKTLESFEQLF
        CSK+WIKI D+ETPCV+D AK+A++EFN +H GSL+YK+VIEGW KELDE++IRYRL V  NDCLRR L+F AIVF  ++EN E T+ LESFEQ F
Subjt:  CSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDENNIRYRLHVHVNDCLRRQLKFMAIVFTQHNENDEITKTLESFEQLF

TrEMBL top hitse value%identityAlignment
A0A0A0K471 Phloem filament protein9.8e-2458.16Show/hide
Query:  CSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDE--NNIRYRLHVHVNDCLRRQLKFMAIVFTQHNENDE-ITKTLESFEQL
        CSKRWIK P+V  PC+Q +A++ ++EF  +HE SL YK V+EGWYKELD+  N IRYRLH+   DC+RR LKF A++  QH +N+E  T TLESFEQ+
Subjt:  CSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDE--NNIRYRLHVHVNDCLRRQLKFMAIVFTQHNENDE-ITKTLESFEQL

A0A5A7SN25 Phloem filament protein7.0e-2256.12Show/hide
Query:  CSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDE--NNIRYRLHVHVNDCLRRQLKFMAIVFTQH-NENDEITKTLESFEQL
        CSK+WIK+P V  PC+Q +A++ V+EF  +++ SL YK V+EGWY+ELD+  N IRYRLHV   DCLRR LKF AI+  QH   N+E T TLESF+++
Subjt:  CSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDE--NNIRYRLHVHVNDCLRRQLKFMAIVFTQH-NENDEITKTLESFEQL

A0A5D3C4U6 Phloem filament protein1.6e-2152.38Show/hide
Query:  ISLACKNCSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELD--ENNIRYRLHVHVNDCLRRQLKFMAIVFTQH-NENDEITKTLE
        +S     CSK+WIK+P V  PC+Q +A++ V+EF  +++ SL YK V+EGWY+ELD   N +RYRLHV   DCLRR LKF AI+  QH   N+E T TLE
Subjt:  ISLACKNCSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELD--ENNIRYRLHVHVNDCLRRQLKFMAIVFTQH-NENDEITKTLE

Query:  SFEQL
        SF+++
Subjt:  SFEQL

A0A6J1EQ39 uncharacterized protein LOC111434636 isoform X23.4e-1645.54Show/hide
Query:  ISLACKNC-----SKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDENNIRYRLHVHVNDCLRRQLKFMAIVFTQHNENDEITKT
        +S+A K C      ++WIKIPDV   CVQ++AK AV++FN +H  SLKY+ + EGWY EL +NN++YRLH+   D L+R L + A+VF +  + + I K 
Subjt:  ISLACKNC-----SKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDENNIRYRLHVHVNDCLRRQLKFMAIVFTQHNENDEITKT

Query:  L
        +
Subjt:  L

E5GCR7 Phloem filament protein7.0e-2256.12Show/hide
Query:  CSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDE--NNIRYRLHVHVNDCLRRQLKFMAIVFTQH-NENDEITKTLESFEQL
        CSK+WIK+P V  PC+Q +A++ V+EF  +++ SL YK V+EGWY+ELD+  N IRYRLHV   DCLRR LKF AI+  QH   N+E T TLESF+++
Subjt:  CSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDE--NNIRYRLHVHVNDCLRRQLKFMAIVFTQH-NENDEITKTLESFEQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGACGCCACATTGTATAATGAGGCGTCAACATTTCAAAGATATGCTGACGTCACATTGTAATCGTTGGGATATAAGAAATACCATCGTCAAGTATGTGTCGTCGAC
ATTGTGGGGATACGCCGATGTTGTTTGCATATCGTTGGCATGCAAGAATTGTTCCAAAAGGTGGATTAAAATCCCTGATGTTGAGACTCCTTGTGTTCAAGACATGGCAA
AGTATGCTGTACAAGAGTTCAACAATGAACATGAAGGGAGCTTGAAATACAAAAGGGTTATTGAAGGTTGGTATAAGGAATTGGATGAAAACAACATAAGGTACCGTCTT
CATGTTCATGTCAACGACTGTCTTAGACGTCAACTCAAATTTATGGCTATTGTGTTCACACAACATAATGAAAATGATGAAATTACTAAGACTCTTGAATCTTTTGAGCA
GCTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGACGCCACATTGTATAATGAGGCGTCAACATTTCAAAGATATGCTGACGTCACATTGTAATCGTTGGGATATAAGAAATACCATCGTCAAGTATGTGTCGTCGAC
ATTGTGGGGATACGCCGATGTTGTTTGCATATCGTTGGCATGCAAGAATTGTTCCAAAAGGTGGATTAAAATCCCTGATGTTGAGACTCCTTGTGTTCAAGACATGGCAA
AGTATGCTGTACAAGAGTTCAACAATGAACATGAAGGGAGCTTGAAATACAAAAGGGTTATTGAAGGTTGGTATAAGGAATTGGATGAAAACAACATAAGGTACCGTCTT
CATGTTCATGTCAACGACTGTCTTAGACGTCAACTCAAATTTATGGCTATTGTGTTCACACAACATAATGAAAATGATGAAATTACTAAGACTCTTGAATCTTTTGAGCA
GCTTTTCTAA
Protein sequenceShow/hide protein sequence
MLTPHCIMRRQHFKDMLTSHCNRWDIRNTIVKYVSSTLWGYADVVCISLACKNCSKRWIKIPDVETPCVQDMAKYAVQEFNNEHEGSLKYKRVIEGWYKELDENNIRYRL
HVHVNDCLRRQLKFMAIVFTQHNENDEITKTLESFEQLF