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Clc09G18230 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G18230
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPhloem filament protein
Genome locationClcChr09:30503371..30503787
RNA-Seq ExpressionClc09G18230
SyntenyClc09G18230
Gene Ontology termsGO:0004869 - cysteine-type endopeptidase inhibitor activity (molecular function)
InterPro domainsIPR009994 - Phloem filament PP1
IPR027214 - Cystatin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34263.1 phloem filament protein [Cucumis melo subsp. melo]1.8e-1038.52Show/hide
Query:  IGGGIGIGVELPGIGGGGIGIGGGINIGIGGTGDNSGSGGSGAS-PWVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLK
        IGGGI IG+ +PGI    I IGGGI I     G   G      S  W +I  ++ P + E+A+F+V+ FN  H N L++Q V E WV    +  K Y ++
Subjt:  IGGGIGIGVELPGIGGGGIGIGGGINIGIGGTGDNSGSGGSGAS-PWVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLK

Query:  LTVLDCLERLLRFEVIVCEVTNGDDKYKLESFVQI
        L   DCL R L++  +V E+      + L SF QI
Subjt:  LTVLDCLERLLRFEVIVCEVTNGDDKYKLESFVQI

XP_023530867.1 uncharacterized protein LOC111793278 [Cucurbita pepo subsp. pepo]2.0e-0939.77Show/hide
Query:  GASPWVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCEVTNGDDKYKLE
        G   W+QI D+ S  V EVA+ +VE+FN+ H ++L+Y+ ++EGW   + +N  +YRL +  +D L+R L +E +V E     +K KLE
Subjt:  GASPWVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCEVTNGDDKYKLE

XP_023530959.1 uncharacterized protein LOC111793346 [Cucurbita pepo subsp. pepo]2.0e-0939.77Show/hide
Query:  GASPWVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCEVTNGDDKYKLE
        G   W+QI D+ S  V EVA+ +VE+FN+ H ++L+Y+ ++EGW   + +N  +YRL +  +D L+R L +E +V E     +K KLE
Subjt:  GASPWVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCEVTNGDDKYKLE

XP_038887119.1 uncharacterized protein LOC120077304 [Benincasa hispida]1.8e-1347.78Show/hide
Query:  WVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCE--VTNGDDKYKLESFVQ
        W++I DL++P V + A+F++E FN+ HN +LRY+ V EGW + +DE+  RYRL +   DCL RLL FE IV      NG+    LESF Q
Subjt:  WVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCE--VTNGDDKYKLESFVQ

XP_038887120.1 uncharacterized protein LOC120077305 [Benincasa hispida]2.5e-1242.11Show/hide
Query:  IGGGIGIGVELPGIG-GGGIGIGGGINIGIGGTGDNSGSGGSGASPWVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLK
        IGG +G+G+ LPGIG GGGI IGGG  +         GSGG+   P       D P + E+ +F+VE FN+ +N+ L++Q VY+     +D     Y L 
Subjt:  IGGGIGIGVELPGIG-GGGIGIGGGINIGIGGTGDNSGSGGSGASPWVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLK

Query:  LTVLDCLERLLRFEVIVCEV-TNGDDKYKLESF
        LT +DCL+RLL F+  V EV  +G  +  LESF
Subjt:  LTVLDCLERLLRFEVIVCEV-TNGDDKYKLESF

TrEMBL top hitse value%identityAlignment
A0A0A0K477 PP1 domain-containing protein3.1e-0837.78Show/hide
Query:  IGGGIGIGVELPGIGGGGIGIGGGINIGIGGTGDNSGSGGSGASPWVQIFDLDS-PIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLK
        IGGGIGIG+ +PGI    + IGGGI IG    G  S      +  W Q+ +  +  ++  VA F+V  FN  + N L +  V E WV  + +  K Y ++
Subjt:  IGGGIGIGVELPGIGGGGIGIGGGINIGIGGTGDNSGSGGSGASPWVQIFDLDS-PIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLK

Query:  LTVLDCLERLLRFEVIVCEVTNGDDKYKLESFVQI
        L   DCL R L F  IV E+      + L SF QI
Subjt:  LTVLDCLERLLRFEVIVCEVTNGDDKYKLESFVQI

A0A6J1EI90 uncharacterized protein LOC1114345928.3e-0937.78Show/hide
Query:  WVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCEVTNGDDKY-KLESFVQI
        W++I D+    V EVA+ +VE+FN+ H ++L+Y+ ++EGW   + +N  +YRL +  +D L+R L +E +V E     ++  KL SFV I
Subjt:  WVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCEVTNGDDKY-KLESFVQI

A0A6J1EJ75 uncharacterized protein LOC111434636 isoform X11.1e-0836.67Show/hide
Query:  WVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCEVTNGDDKY-KLESFVQI
        W++I D+    V EVA+ +VE+FN+ H ++L+Y+ ++EGW   + +N  +YRL +  +D L+R L +E +V E     ++  KL SF+ I
Subjt:  WVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCEVTNGDDKY-KLESFVQI

A0A6J1ELQ9 uncharacterized protein LOC1114345152.8e-0938.64Show/hide
Query:  GASPWVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCEVTNGDDKYKLE
        G   W++I D+ S  V EVA+ +VE+FN+ H ++L+Y+ ++EGW   + +N  +YRL +  +D L+R L +E +V E     +K KLE
Subjt:  GASPWVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCEVTNGDDKYKLE

A0A6J1EQ39 uncharacterized protein LOC111434636 isoform X21.1e-0836.67Show/hide
Query:  WVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCEVTNGDDKY-KLESFVQI
        W++I D+    V EVA+ +VE+FN+ H ++L+Y+ ++EGW   + +N  +YRL +  +D L+R L +E +V E     ++  KL SF+ I
Subjt:  WVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCEVTNGDDKY-KLESFVQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATTATTGGTGGAGGTATTGGTATTGGCGTTGAGCTTCCCGGTATAGGTGGCGGAGGCATCGGCATCGGGGGTGGCATCAACATCGGTATTGGCGGTACCGGCGA
TAACAGTGGTAGCGGCGGTAGTGGCGCATCCCCATGGGTTCAAATTTTCGATCTAGACAGCCCCATAGTTCCAGAAGTTGCAAGGTTTTCAGTGGAACGTTTCAACCTGG
ACCATAATAATACACTCAGGTACCAACACGTTTATGAAGGTTGGGTTCAGTTCGTGGATGAAAACACCAAAAGGTATCGTCTCAAATTAACAGTCCTAGACTGTTTGGAA
CGTTTGCTCAGGTTTGAGGTTATTGTGTGTGAAGTAACAAATGGCGATGACAAGTATAAACTTGAATCCTTCGTGCAAATCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATTATTGGTGGAGGTATTGGTATTGGCGTTGAGCTTCCCGGTATAGGTGGCGGAGGCATCGGCATCGGGGGTGGCATCAACATCGGTATTGGCGGTACCGGCGA
TAACAGTGGTAGCGGCGGTAGTGGCGCATCCCCATGGGTTCAAATTTTCGATCTAGACAGCCCCATAGTTCCAGAAGTTGCAAGGTTTTCAGTGGAACGTTTCAACCTGG
ACCATAATAATACACTCAGGTACCAACACGTTTATGAAGGTTGGGTTCAGTTCGTGGATGAAAACACCAAAAGGTATCGTCTCAAATTAACAGTCCTAGACTGTTTGGAA
CGTTTGCTCAGGTTTGAGGTTATTGTGTGTGAAGTAACAAATGGCGATGACAAGTATAAACTTGAATCCTTCGTGCAAATCCACTAA
Protein sequenceShow/hide protein sequence
MSIIGGGIGIGVELPGIGGGGIGIGGGINIGIGGTGDNSGSGGSGASPWVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLE
RLLRFEVIVCEVTNGDDKYKLESFVQIH