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Clc09G18510 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G18510
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCalcium-binding EF-hand family protein
Genome locationClcChr09:30963986..30965168
RNA-Seq ExpressionClc09G18510
SyntenyClc09G18510
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592136.1 Calcium-binding protein CML42, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2868.63Show/hide
Query:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS
        +D + FL LYESI E N+G EEIESD LNAF+VFD+  DGFIS DEL NVLVR GLW+D+RC       CRRMI AFD+DLDGRLDF+EFKNM   SSNS
Subjt:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS

Query:  SS
        SS
Subjt:  SS

KAG7025009.1 Calcium-binding protein CML42, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-2868.63Show/hide
Query:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS
        +D + FL LYESI E N+G EEIESD LNAF+VFD+  DGFIS DEL NVLVR GLW+D RC       CRRMI AFD+DLDGRLDF+EFKNM   SSNS
Subjt:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS

Query:  SS
        SS
Subjt:  SS

XP_022976028.1 probable calcium-binding protein CML44 [Cucurbita maxima]1.6e-2767.65Show/hide
Query:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS
        +D + FL LYESI E N+G EEIESD LNAF+VFD+  DGFIS DEL NVLVR GLW+D+RC       CRRMI AFD+DLDGRLDF+EFKNM   SS+S
Subjt:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS

Query:  SS
        SS
Subjt:  SS

XP_023536413.1 probable calcium-binding protein CML44 [Cucurbita pepo subsp. pepo]1.6e-2768.32Show/hide
Query:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS
        +D + FL LYESI E N+G EEIESD LNAF+VFD+  DGFIS DEL NVLVR GLW+D RC       CRRMI AFD+DLDGRLDF+EFKNM   SSNS
Subjt:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS

Query:  S
        S
Subjt:  S

XP_038899375.1 calmodulin-like protein 3 [Benincasa hispida]1.1e-3374.53Show/hide
Query:  MDLNGFLFLYESIREK----NKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMS
        +DLN FL LYESI EK    N+GSEE+ESD LNAF VFD+  DGFIS DEL+NVLVR GLWNDERCGG G +YCRRMI AFD+DLDGR+DFQEFKNM M+
Subjt:  MDLNGFLFLYESIREK----NKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMS

Query:  SSNSSS
        SSNS S
Subjt:  SSNSSS

TrEMBL top hitse value%identityAlignment
A0A1S3B3T2 probable calcium-binding protein CML442.1e-1750Show/hide
Query:  MDLNGFLFLYESIREKNKGS---------EEIESDDLN----AFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDF
        +D + FLF YESI ++NKG          ++   DD      AFKVFD  GDGFIS DEL+NVLVR  LW+  R      +YCR MI A+D +LDG+LDF
Subjt:  MDLNGFLFLYESIREKNKGS---------EEIESDDLN----AFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDF

Query:  QEFKNMFM
        +EFKNM +
Subjt:  QEFKNMFM

A0A5D3B6U1 Putative calcium-binding protein CML442.1e-1750Show/hide
Query:  MDLNGFLFLYESIREKNKGS---------EEIESDDLN----AFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDF
        +D + FLF YESI ++NKG          ++   DD      AFKVFD  GDGFIS DEL+NVLVR  LW+  R      +YCR MI A+D +LDG+LDF
Subjt:  MDLNGFLFLYESIREKNKGS---------EEIESDDLN----AFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDF

Query:  QEFKNMFM
        +EFKNM +
Subjt:  QEFKNMFM

A0A6J1CD20 probable calcium-binding protein CML448.2e-2259.8Show/hide
Query:  MDLNGFLFLYESIREKNK--GSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSS
        +D   FL LY+SI E+N+    EEIESD LNAF+VFD+  DGFI  +EL+NVL R GLW DERCG      C  MI AFD + DGRLDFQEFKN+ +S+S
Subjt:  MDLNGFLFLYESIREKNK--GSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSS

Query:  NS
        NS
Subjt:  NS

A0A6J1FD73 probable calcium-binding protein CML446.5e-2767.33Show/hide
Query:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS
        +D + FL LYESI E N+G EEIESD LNAF+VFD+  DGFIS DEL NVLVR  LW+D RC       CRRMI AFD+DLDGRLDF+EFKNM   SSNS
Subjt:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS

Query:  S
        S
Subjt:  S

A0A6J1IKW9 probable calcium-binding protein CML447.7e-2867.65Show/hide
Query:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS
        +D + FL LYESI E N+G EEIESD LNAF+VFD+  DGFIS DEL NVLVR GLW+D+RC       CRRMI AFD+DLDGRLDF+EFKNM   SS+S
Subjt:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS

Query:  SS
        SS
Subjt:  SS

SwissProt top hitse value%identityAlignment
O22845 Calmodulin-like protein 52.8e-1137.86Show/hide
Query:  MDLNGFLFLYESIREKNKGSEEIESDDL-NAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSN
        +D++ F  LY SI +++    E E +D+ +AF VFD+ GDGFI+ +EL++V+   GL   +   G     C++MI   D D DGR++++EF  M      
Subjt:  MDLNGFLFLYESIREKNKGSEEIESDDL-NAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSN

Query:  SSS
        SSS
Subjt:  SSS

Q2QVI1 Probable calcium-binding protein CML281.5e-0948.68Show/hide
Query:  GSEEIESDDL-NAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNM
        G+ + E + +  AF VFD+ GDGFI+ DEL++VL   GL    + G   D+ CRRMI+  D D DGR+DF+EFK M
Subjt:  GSEEIESDDL-NAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNM

Q9LNE7 Calmodulin-like protein 71.5e-0937.62Show/hide
Query:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS
        +D++ F  LY++I ++    +E E D   AF VFD+ GDGFI+ DEL+ VL   GL       G   + C++MI   D+D DGR++++EF+ M      +
Subjt:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS

Query:  S
        S
Subjt:  S

Q9LPK5 Probable calcium-binding protein CML449.1e-1039.22Show/hide
Query:  MDLNGFLFLYESIREKNKGSEE-----IESDD--LNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNM
        +DL+ FL  Y      +KGS++      ++D+    AF VFD  GDG+IS +EL++VL R G   + +        C RMI   D +LDG +DF+EFKNM
Subjt:  MDLNGFLFLYESIREKNKGSEE-----IESDD--LNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNM

Query:  FM
         +
Subjt:  FM

Q9SU00 Calmodulin-like protein 25.3e-1040.86Show/hide
Query:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNM
        MD++ F  LY+ + E+    +E E D   AF+VFD+ GDGFI+ +EL++VL   GL       G     C++MI+  D+D DG ++F+EFK M
Subjt:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNM

Arabidopsis top hitse value%identityAlignment
AT1G05990.1 EF hand calcium-binding protein family1.1e-1037.62Show/hide
Query:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS
        +D++ F  LY++I ++    +E E D   AF VFD+ GDGFI+ DEL+ VL   GL       G   + C++MI   D+D DGR++++EF+ M      +
Subjt:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNS

Query:  S
        S
Subjt:  S

AT1G21550.1 Calcium-binding EF-hand family protein6.4e-1139.22Show/hide
Query:  MDLNGFLFLYESIREKNKGSEE-----IESDD--LNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNM
        +DL+ FL  Y      +KGS++      ++D+    AF VFD  GDG+IS +EL++VL R G   + +        C RMI   D +LDG +DF+EFKNM
Subjt:  MDLNGFLFLYESIREKNKGSEE-----IESDD--LNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNM

Query:  FM
         +
Subjt:  FM

AT2G43290.1 Calcium-binding EF-hand family protein2.0e-1237.86Show/hide
Query:  MDLNGFLFLYESIREKNKGSEEIESDDL-NAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSN
        +D++ F  LY SI +++    E E +D+ +AF VFD+ GDGFI+ +EL++V+   GL   +   G     C++MI   D D DGR++++EF  M      
Subjt:  MDLNGFLFLYESIREKNKGSEEIESDDL-NAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSN

Query:  SSS
        SSS
Subjt:  SSS

AT4G12860.1 EF hand calcium-binding protein family3.8e-1140.86Show/hide
Query:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNM
        MD++ F  LY+ + E+    +E E D   AF+VFD+ GDGFI+ +EL++VL   GL       G     C++MI+  D+D DG ++F+EFK M
Subjt:  MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNM

AT4G20780.1 calmodulin like 422.4e-1052.78Show/hide
Query:  EIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNM
        E ESD   AFKVFD+ GDGFIS  ELQ VL + GL       GG      +MI + D + DGR+DF EFKNM
Subjt:  EIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGAATGGATTCTTGTTTCTGTACGAATCAATAAGAGAGAAAAATAAGGGAAGCGAGGAGATTGAGAGCGATGATTTGAATGCATTCAAAGTGTTCGACAAGAC
TGGCGATGGTTTCATTTCGTACGATGAGCTTCAGAATGTGTTGGTGAGATGGGGGCTTTGGAATGATGAGCGCTGTGGTGGCGGTGGTGATAATTATTGTAGGCGTATGA
TCAACGCTTTTGATATTGATTTGGATGGGCGGCTTGATTTTCAGGAATTCAAGAACATGTTCATGAGTTCTTCCAATTCTTCCTCTTACAATATTCATGATCTTTTAAAG
TGGATTTCAATGGCAGGTGGATTTTGCAACGTAGAAGGAGCCAAGTCTTCACTTCCTGAGATTCTTGGCTAA
mRNA sequenceShow/hide mRNA sequence
TGGAAGGTAGTGTAAGCCTGGGAAGCAACCAATAATCATGATTTACCACCAAAGTCACGCACCGATTTTTCCTTTCAAAGTAGTACAATTTGAAAGAAAAAAAATGTTTT
TTTATTTTATTTTTCAAATGTGGATAACTATGAGCAGAAGAGCTTACAATTCATTTTTGTCAACGAATTGCGTTGCTTATTCCTTTGAAGTTCACATTTGCAATTTCTCA
TTCGTCGACTGCAAATTCAGTGGACGGAATCATCCGATGCTCTGCCAATTGTGTTCCTCGTACTCCGATCACTTTCTTGGAGCGCGCCGACGCCAGAACTTCTGACGTCT
ACAGAACTACTCCCTTCTCTTTAAGCGTGTTGGGCTTTAATGGGCCAAAAATATGAGGCCCAAATGCATTAATTGCTGAATCGAAGATGGATTTGAATGGATTCTTGTTT
CTGTACGAATCAATAAGAGAGAAAAATAAGGGAAGCGAGGAGATTGAGAGCGATGATTTGAATGCATTCAAAGTGTTCGACAAGACTGGCGATGGTTTCATTTCGTACGA
TGAGCTTCAGAATGTGTTGGTGAGATGGGGGCTTTGGAATGATGAGCGCTGTGGTGGCGGTGGTGATAATTATTGTAGGCGTATGATCAACGCTTTTGATATTGATTTGG
ATGGGCGGCTTGATTTTCAGGAATTCAAGAACATGTTCATGAGTTCTTCCAATTCTTCCTCTTACAATATTCATGATCTTTTAAAGTGGATTTCAATGGCAGGTGGATTT
TGCAACGTAGAAGGAGCCAAGTCTTCACTTCCTGAGATTCTTGGCTAAGTATTAATTAAAGTCTAGATAGGTAACTATTTTGTCTTTTTTGTTTTTGTTTTTAAAAATTA
TGTCTATTTTCTTCTCGTTTCGATTTGCATCTTTACGAAAAGGGATAAATTTGAGGAGCAAGTAGTGTATATAGAGTTAATTTTTAAAAGCAAAAACAAAAAACTAAATG
GTTTCTAAACAAGGCTTACATATTCTATAAATTTCTCAAAATACATATCAACCCGAAAACATAATCGAGCATAATTCAATCAAATCAACATAATATCGTGTTGGGGAAGT
GAGTTTCTCTAGATTTTCATTGTTATTGATTTGCATAGAAATAATTTGTGTAGAGAGAAATTTTCTAGTAGTATGAATATTAT
Protein sequenceShow/hide protein sequence
MDLNGFLFLYESIREKNKGSEEIESDDLNAFKVFDKTGDGFISYDELQNVLVRWGLWNDERCGGGGDNYCRRMINAFDIDLDGRLDFQEFKNMFMSSSNSSSYNIHDLLK
WISMAGGFCNVEGAKSSLPEILG