; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G18775 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G18775
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionS-protein homolog
Genome locationClcChr09:31397231..31397677
RNA-Seq ExpressionClc09G18775
SyntenyClc09G18775
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646231.1 hypothetical protein Csa_023825, partial [Cucumis sativus]1.9e-5078.45Show/hide
Query:  LAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL
        L KW IHVVN LSNGQILL HCKSKDNDLGE +L  G+EFNWRF+VNFWNTTLFWCYLQKPNG HSSFE+FWIES SVWLY MC++ NCIW AKDDGIYL
Subjt:  LAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL

Query:  RDD-TNQKDVLIHKWE
        +D+    KD+LIHKWE
Subjt:  RDD-TNQKDVLIHKWE

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]6.6e-5163.76Show/hide
Query:  MMKQMETRRTKKQCVVLLLLLCLAVLEETKA-AELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHS
        M + M  R TKK  +V LL+L L +LE  +A +EL KWQIHVVN LSNGQ L VHCKSKDNDLGEH L+ G+EFNW F+VN WNTTLFWCYL KP+G  +
Subjt:  MMKQMETRRTKKQCVVLLLLLCLAVLEETKA-AELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHS

Query:  SFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKWE
        SF+ FW+E  S+WL+  CY SNCIW AKDDGIYLRD+  Q+D+L+H+W+
Subjt:  SFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKWE

XP_031745090.1 S-protein homolog 1-like [Cucumis sativus]2.9e-6276.51Show/hide
Query:  MMKQMETRRTKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS
        M KQ+E    KKQCVVLL +LCLA+LEETKA EL KW IHVVN LSNGQILL HCKSKDNDLGE +L  G+EFNWRF+VNFWNTTLFWCYLQKPNG HSS
Subjt:  MMKQMETRRTKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS

Query:  FEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDD-TNQKDVLIHKWE
        FE+FWIES SVWLY MC++ NCIW AKDDGIYL+D+    KD+LIHKWE
Subjt:  FEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDD-TNQKDVLIHKWE

XP_038896421.1 S-protein homolog 1-like [Benincasa hispida]4.9e-5472.97Show/hide
Query:  MMKQMETRRTKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS
        M KQME  RTKKQCVVLL  L L + EETKAAELAKWQIHVVN LS+GQIL VHCKSKD+DLGEHKLSVG+EFNW F+              KPN  HSS
Subjt:  MMKQMETRRTKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS

Query:  FEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKWE
        FEAFWIES SVWLY+MCYDSNCIW AKDDGIYL+D+T Q+D+LIHKWE
Subjt:  FEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKWE

XP_038896594.1 S-protein homolog 1-like [Benincasa hispida]2.7e-6884.03Show/hide
Query:  METRRTKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAF
        ME R   KQCVVL  +LCLA+L+E KAAELAKWQIHVVN LSNGQIL VHCKSKDNDLGEHKLSVG+EFNWRF+VNFWNTTLFWCYLQKPN  HSSF+AF
Subjt:  METRRTKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAF

Query:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKWE
        WIESTSVWLY+MCYDSNCIWIAKDDG+YL+D+TN +DVLIHKWE
Subjt:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKWE

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog4.5e-4557.82Show/hide
Query:  QMETRRTKKQCVVL---LLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS
        ++ET R+ K   ++   L +L LA+++ TKA  L +W IH+VN LSN Q L VHC+SKD+DLG+  LSVG+EFNW FK+NFW+TTLFWCYLQKPN    S
Subjt:  QMETRRTKKQCVVL---LLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS

Query:  FEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKW
        FEAFW+E  S+WL+  C+ SNCIW AKDDGIYL+D+   +D L+H W
Subjt:  FEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKW

A0A6J1CPR8 S-protein homolog1.3e-4761.87Show/hide
Query:  RTKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIES
        R  K  +V L +  LA++E+ +A  L+KWQIHV N+LSN Q+L VHCKSK++DLGEH LSVG+EFNWRF+VN W+TTL+WCYLQKPNG   SF+AFW+E 
Subjt:  RTKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIES

Query:  TSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKW
         S+WLY  C +SNC W AKDDGIYLR++ + +DV +HKW
Subjt:  TSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKW

A0A6J1CQH6 S-protein homolog7.7e-4557.64Show/hide
Query:  METRRTKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAF
        M  R  KK  +V+LL L LA++E   + EL +W IHVVN L NG++L VHCKS+D+DLGE  L  G+EF+W F+VN  +TTLFWC+L+KP+    SF+AF
Subjt:  METRRTKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAF

Query:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKWE
        W+E TS+WL+  CYD+NCIW AKDDG+YLRD+  Q+DVL+HKW+
Subjt:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKWE

A0A6J1CRU0 S-protein homolog3.2e-5163.76Show/hide
Query:  MMKQMETRRTKKQCVVLLLLLCLAVLEETKA-AELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHS
        M + M  R TKK  +V LL+L L +LE  +A +EL KWQIHVVN LSNGQ L VHCKSKDNDLGEH L+ G+EFNW F+VN WNTTLFWCYL KP+G  +
Subjt:  MMKQMETRRTKKQCVVLLLLLCLAVLEETKA-AELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHS

Query:  SFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKWE
        SF+ FW+E  S+WL+  CY SNCIW AKDDGIYLRD+  Q+D+L+H+W+
Subjt:  SFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKWE

A0A6J1HAC3 S-protein homolog1.5e-3750.34Show/hide
Query:  QMETRRTKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEA
        +M     K Q +V L+   LA+     +   +KW+IH+ N+LSNGQ + VHCKSKDNDLGEH L+ G+EF W FKVNFW+TTLFWCYL+KPNG   +F+A
Subjt:  QMETRRTKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEA

Query:  FWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKWE
        FW+E  + WL   C  + C W A+D+GIYL+D++   D  +H W+
Subjt:  FWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKWE

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 68.2e-1232.33Show/hide
Query:  VVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLY
        V++ L+ C  +  + K   +      VV    N  +L VHCKS+D+D G H L  G  + W F VNF N+TL++C   +       F+ +        + 
Subjt:  VVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLY

Query:  DMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKW
        D     NC W AK+DGIY   +  +K+ L +KW
Subjt:  DMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKW

F4JLS0 S-protein homolog 15.0e-2544.83Show/hide
Query:  ELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        ++++WQ+ VVN L+ G+ L +HCKSK++DLGE  L   + F+W F  N  ++T FWCY+ K NG H +   FW     V L+  C   NCIW AK DG+Y
Subjt:  ELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

Query:  LRDDTNQKDVLIHKWE
        L +  + +DVL  KWE
Subjt:  LRDDTNQKDVLIHKWE

P0DN92 S-protein homolog 249.7e-1332.84Show/hide
Query:  VVLLLLLCLAVLEETKAAELAKWQI-HVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWL
        +V++ L+C   L+  +A E  +  +  V  Q  N  +L +HCKS+D+DLG H L+ G  F W+F VNF  +TL++C   +       FE +         
Subjt:  VVLLLLLCLAVLEETKAAELAKWQI-HVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWL

Query:  YDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKW
         D    +NC W A+ DGIY   +   K  L + W
Subjt:  YDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKW

Q2HQ46 S-protein homolog 741.2e-2342.24Show/hide
Query:  ELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        ++++WQ+ V N L+ G+ L +HCKSK+NDLG+  L     F+W F  N  ++TLFWCY+ K +G H + + FW     V L+  C   NC+W AK+DG+Y
Subjt:  ELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

Query:  LRDDTNQKDVLIHKWE
        L +    +DVL  KW+
Subjt:  LRDDTNQKDVLIHKWE

Q9LW22 S-protein homolog 213.7e-1239.42Show/hide
Query:  KWQIHVVNQLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL
        K  I V N+L+  N  IL VHCKSK+ND+G   L +G   ++ FK NFW TT FWC L K             ++  ++  D    S+  W+A+DDGIY 
Subjt:  KWQIHVVNQLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL

Query:  RDDT
          D+
Subjt:  RDDT

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family2.6e-1339.42Show/hide
Query:  KWQIHVVNQLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL
        K  I V N+L+  N  IL VHCKSK+ND+G   L +G   ++ FK NFW TT FWC L K             ++  ++  D    S+  W+A+DDGIY 
Subjt:  KWQIHVVNQLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL

Query:  RDDT
          D+
Subjt:  RDDT

AT4G16295.1 S-protein homologue 13.5e-2644.83Show/hide
Query:  ELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        ++++WQ+ VVN L+ G+ L +HCKSK++DLGE  L   + F+W F  N  ++T FWCY+ K NG H +   FW     V L+  C   NCIW AK DG+Y
Subjt:  ELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

Query:  LRDDTNQKDVLIHKWE
        L +  + +DVL  KWE
Subjt:  LRDDTNQKDVLIHKWE

AT4G29035.1 Plant self-incompatibility protein S1 family8.7e-2542.24Show/hide
Query:  ELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        ++++WQ+ V N L+ G+ L +HCKSK+NDLG+  L     F+W F  N  ++TLFWCY+ K +G H + + FW     V L+  C   NC+W AK+DG+Y
Subjt:  ELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

Query:  LRDDTNQKDVLIHKWE
        L +    +DVL  KW+
Subjt:  LRDDTNQKDVLIHKWE

AT5G04347.1 Plant self-incompatibility protein S1 family6.5e-1243.62Show/hide
Query:  VVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQK-PN-GLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        V N+L+N ++L V C+SKD++LG+H L VG      F  N W  TLFWC L K P+  LH +F+A+     S W  D+      +WIA++DGIY
Subjt:  VVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQK-PN-GLHSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

AT5G04350.1 Plant self-incompatibility protein S1 family6.3e-1533.6Show/hide
Query:  LLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYL-QKPNGLHS----SFEAFWIESTSV
        +++ LC+ V       E+ + ++ + NQL + ++L VHC+SKD+DLGEH L +G ++ + F  N W TT F C + Q PN  H     ++E  W ++   
Subjt:  LLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYL-QKPNGLHS----SFEAFWIESTSV

Query:  WLYDMCYDSNCIWIAKDDGIYLRDD
               +++C WI ++DGIY   D
Subjt:  WLYDMCYDSNCIWIAKDDGIYLRDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGCAAATGGAAACGAGGCGTACGAAAAAGCAGTGTGTGGTGTTGTTGCTATTGTTGTGTTTGGCAGTGCTTGAAGAAACCAAGGCTGCGGAGCTTGCAAAATG
GCAGATCCATGTTGTGAACCAGCTAAGCAATGGCCAAATCCTATTGGTTCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAGCTTAGTGTTGGATCTGAATTCA
ATTGGAGATTTAAAGTAAACTTTTGGAATACCACATTGTTTTGGTGTTACTTGCAAAAGCCAAATGGACTACATTCGTCATTCGAAGCCTTTTGGATTGAGAGCACATCG
GTTTGGCTCTATGATATGTGCTACGATTCTAACTGTATTTGGATAGCTAAAGATGATGGAATTTATTTGAGGGACGACACTAATCAAAAAGATGTTTTGATTCATAAGTG
GGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGCAAATGGAAACGAGGCGTACGAAAAAGCAGTGTGTGGTGTTGTTGCTATTGTTGTGTTTGGCAGTGCTTGAAGAAACCAAGGCTGCGGAGCTTGCAAAATG
GCAGATCCATGTTGTGAACCAGCTAAGCAATGGCCAAATCCTATTGGTTCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAGCTTAGTGTTGGATCTGAATTCA
ATTGGAGATTTAAAGTAAACTTTTGGAATACCACATTGTTTTGGTGTTACTTGCAAAAGCCAAATGGACTACATTCGTCATTCGAAGCCTTTTGGATTGAGAGCACATCG
GTTTGGCTCTATGATATGTGCTACGATTCTAACTGTATTTGGATAGCTAAAGATGATGGAATTTATTTGAGGGACGACACTAATCAAAAAGATGTTTTGATTCATAAGTG
GGAATAA
Protein sequenceShow/hide protein sequence
MMKQMETRRTKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNQLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTS
VWLYDMCYDSNCIWIAKDDGIYLRDDTNQKDVLIHKWE