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Clc09G19063 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G19063
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionL10-interacting MYB domain-containing protein-like
Genome locationClcChr09:31972328..31973122
RNA-Seq ExpressionClc09G19063
SyntenyClc09G19063
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053615.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]2.2e-3457.55Show/hide
Query:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHSSTASHVDEGQSSGKK-DVDEELMECFKILNTME
        +++SD      + +     + V++    KS KR RRK+DEF +F SSF+DVYAENAKRK+DILE  S   S VDE Q+S KK D+ EELMEC  ILNTME
Subjt:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHSSTASHVDEGQSSGKK-DVDEELMECFKILNTME

Query:  DIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI
        D+ GE Y+K+LKLLHGDLAWRKLFL +PD+ K+DFIN++
Subjt:  DIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI

TYJ96795.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]9.8e-3558.16Show/hide
Query:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKK-DVDEELMECFKILNT
        +++SD      + +     + V++    KS KR RRK+DEFG+F SSF+DVYAENAKRK+DILE  S   T+S VDE Q+S KK D+ EELMEC  ILNT
Subjt:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKK-DVDEELMECFKILNT

Query:  MEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI
        MED+ GE Y+K+LKLLHGDLAWRKLFL +PD+ K+DFIN++
Subjt:  MEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI

TYK06268.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]9.8e-3558.16Show/hide
Query:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKK-DVDEELMECFKILNT
        +++SD      + +     + V++    KS KR RRK+DEFG+F SSF+DVYAENAKRK+DILE  S   T+S VDE Q+S KK D+ EELMEC  ILNT
Subjt:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKK-DVDEELMECFKILNT

Query:  MEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI
        MED+ GE Y+K+LKLLHGDLAWRKLFL +PD+ K+DFIN++
Subjt:  MEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI

TYK21097.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]9.8e-3558.16Show/hide
Query:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKK-DVDEELMECFKILNT
        +++SD      + +     + V++    KS KR RRK+DEFG+F SSF+DVYAENAKRK+DILE  S   T+S VDE Q+S KK D+ EELMEC  ILNT
Subjt:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKK-DVDEELMECFKILNT

Query:  MEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI
        MED+ GE Y+K+LKLLHGDLAWRKLFL +PD+ K+DFIN++
Subjt:  MEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI

XP_008461742.1 PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo]2.0e-4353.54Show/hide
Query:  MRNQLNAST----THDQLKNKFSKLRQIYKDFKKILSDMTKNGWDPLLVI-----------------------RTLLVKKMTMKKSGKRVRRKRDEFGNF
        MR++LNA+T    +HDQLKNKF+KLR+I K FKKILSDMT NGWDPL  +                         + V++    KS KRVRR RDEF +F
Subjt:  MRNQLNAST----THDQLKNKFSKLRQIYKDFKKILSDMTKNGWDPLLVI-----------------------RTLLVKKMTMKKSGKRVRRKRDEFGNF

Query:  LSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKKDVD--EELMECFKILNTMEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI
         S F+++YAENA R +DILE  S   T+S VDE Q+S KKD D  EELMEC  IL+TMED+ G+ Y+K+LKLLH DL WRKLFL +PD+ K+DFIN++
Subjt:  LSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKKDVD--EELMECFKILNTMEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI

TrEMBL top hitse value%identityAlignment
A0A1S3CFA7 L10-interacting MYB domain-containing protein-like9.6e-4453.54Show/hide
Query:  MRNQLNAST----THDQLKNKFSKLRQIYKDFKKILSDMTKNGWDPLLVI-----------------------RTLLVKKMTMKKSGKRVRRKRDEFGNF
        MR++LNA+T    +HDQLKNKF+KLR+I K FKKILSDMT NGWDPL  +                         + V++    KS KRVRR RDEF +F
Subjt:  MRNQLNAST----THDQLKNKFSKLRQIYKDFKKILSDMTKNGWDPLLVI-----------------------RTLLVKKMTMKKSGKRVRRKRDEFGNF

Query:  LSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKKDVD--EELMECFKILNTMEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI
         S F+++YAENA R +DILE  S   T+S VDE Q+S KKD D  EELMEC  IL+TMED+ G+ Y+K+LKLLH DL WRKLFL +PD+ K+DFIN++
Subjt:  LSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKKDVD--EELMECFKILNTMEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI

A0A5A7UIT7 L10-interacting MYB domain-containing protein-like1.1e-3457.55Show/hide
Query:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHSSTASHVDEGQSSGKK-DVDEELMECFKILNTME
        +++SD      + +     + V++    KS KR RRK+DEF +F SSF+DVYAENAKRK+DILE  S   S VDE Q+S KK D+ EELMEC  ILNTME
Subjt:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHSSTASHVDEGQSSGKK-DVDEELMECFKILNTME

Query:  DIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI
        D+ GE Y+K+LKLLHGDLAWRKLFL +PD+ K+DFIN++
Subjt:  DIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI

A0A5D3BNQ5 L10-interacting MYB domain-containing protein-like4.8e-3558.16Show/hide
Query:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKK-DVDEELMECFKILNT
        +++SD      + +     + V++    KS KR RRK+DEFG+F SSF+DVYAENAKRK+DILE  S   T+S VDE Q+S KK D+ EELMEC  ILNT
Subjt:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKK-DVDEELMECFKILNT

Query:  MEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI
        MED+ GE Y+K+LKLLHGDLAWRKLFL +PD+ K+DFIN++
Subjt:  MEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI

A0A5D3C535 L10-interacting MYB domain-containing protein-like4.8e-3558.16Show/hide
Query:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKK-DVDEELMECFKILNT
        +++SD      + +     + V++    KS KR RRK+DEFG+F SSF+DVYAENAKRK+DILE  S   T+S VDE Q+S KK D+ EELMEC  ILNT
Subjt:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKK-DVDEELMECFKILNT

Query:  MEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI
        MED+ GE Y+K+LKLLHGDLAWRKLFL +PD+ K+DFIN++
Subjt:  MEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI

A0A5D3DBS2 L10-interacting MYB domain-containing protein-like4.8e-3558.16Show/hide
Query:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKK-DVDEELMECFKILNT
        +++SD      + +     + V++    KS KR RRK+DEFG+F SSF+DVYAENAKRK+DILE  S   T+S VDE Q+S KK D+ EELMEC  ILNT
Subjt:  KILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHS--STASHVDEGQSSGKK-DVDEELMECFKILNT

Query:  MEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI
        MED+ GE Y+K+LKLLHGDLAWRKLFL +PD+ K+DFIN++
Subjt:  MEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAACCAACTAAATGCTAGTACTACTCATGATCAACTGAAAAATAAGTTTAGCAAATTACGACAAATTTACAAAGATTTCAAAAAGATATTGAGTGATATGACAAA
AAATGGTTGGGATCCATTGTTGGTAATACGAACTTTGTTGGTGAAGAAAATGACAATGAAAAAAAGTGGAAAACGAGTTCGAAGGAAGAGAGACGAATTTGGGAATTTCC
TTTCTTCATTTATAGATGTGTATGCTGAGAACGCAAAGAGAAAACATGACATCCTGGAAACTCATAGTTCTACTGCTAGTCATGTTGACGAGGGCCAATCATCAGGGAAA
AAAGATGTTGATGAAGAGCTGATGGAATGTTTCAAAATTTTAAATACAATGGAGGATATTTATGGAGAGTTTTATACTAAAGTATTGAAACTTCTGCATGGAGATCTTGC
TTGGAGAAAATTATTTTTGCACATACCTGATGCAAGCAAGAAAGATTTCATAAACAATATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAACCAACTAAATGCTAGTACTACTCATGATCAACTGAAAAATAAGTTTAGCAAATTACGACAAATTTACAAAGATTTCAAAAAGATATTGAGTGATATGACAAA
AAATGGTTGGGATCCATTGTTGGTAATACGAACTTTGTTGGTGAAGAAAATGACAATGAAAAAAAGTGGAAAACGAGTTCGAAGGAAGAGAGACGAATTTGGGAATTTCC
TTTCTTCATTTATAGATGTGTATGCTGAGAACGCAAAGAGAAAACATGACATCCTGGAAACTCATAGTTCTACTGCTAGTCATGTTGACGAGGGCCAATCATCAGGGAAA
AAAGATGTTGATGAAGAGCTGATGGAATGTTTCAAAATTTTAAATACAATGGAGGATATTTATGGAGAGTTTTATACTAAAGTATTGAAACTTCTGCATGGAGATCTTGC
TTGGAGAAAATTATTTTTGCACATACCTGATGCAAGCAAGAAAGATTTCATAAACAATATCTAG
Protein sequenceShow/hide protein sequence
MRNQLNASTTHDQLKNKFSKLRQIYKDFKKILSDMTKNGWDPLLVIRTLLVKKMTMKKSGKRVRRKRDEFGNFLSSFIDVYAENAKRKHDILETHSSTASHVDEGQSSGK
KDVDEELMECFKILNTMEDIYGEFYTKVLKLLHGDLAWRKLFLHIPDASKKDFINNI