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Clc09G19320 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G19320
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:32635616..32635927
RNA-Seq ExpressionClc09G19320
SyntenyClc09G19320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4074372.1 unnamed protein product [Lactuca saligna]2.6e-1752.63Show/hide
Query:  SPLEVFAGNQSVSFPQPLWYFAYRF-------------------FSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSS
        SPLE FAGNQSVSFPQPLW   +R                        NRRGLS GS LLAEMNG EGGW+ +   GR      +   PGKEE +K LSS
Subjt:  SPLEVFAGNQSVSFPQPLWYFAYRF-------------------FSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSS

Query:  RSTCFPRHWKSRPA
         ST FPR WKSRPA
Subjt:  RSTCFPRHWKSRPA

GFA31769.1 hypothetical protein [Tanacetum cinerariifolium]3.3e-0954.55Show/hide
Query:  WYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSSRSTCFPRHWKSRPA
        W    +     NRRGLS GS LLAE NG EGGW+ +   GR      +   PGKEE KK LSS ST FPR WKSRPA
Subjt:  WYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSSRSTCFPRHWKSRPA

OWM62589.1 hypothetical protein CDL15_Pgr000026 [Punica granatum]1.5e-2272.73Show/hide
Query:  TAGNSRGSPLEVFAGNQSVSFPQPLWYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFLGRAEGEGHKRRFPGK
        T     GSPLE FAGNQSVSFPQPLWYFA  FF LC  RG   GSPLLAEMNG EGGWV F GRA GEGHKRR P +
Subjt:  TAGNSRGSPLEVFAGNQSVSFPQPLWYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFLGRAEGEGHKRRFPGK

PLY99468.1 hypothetical protein LSAT_5X185920 [Lactuca sativa]3.0e-1055.84Show/hide
Query:  WYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSSRSTCFPRHWKSRPA
        W    +     NRRGLS GS LLAEMNG EGGW+ +   GR      +   PGKEE KK LSS ST FPR WKSRPA
Subjt:  WYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSSRSTCFPRHWKSRPA

PWA41958.1 hypothetical protein CTI12_AA549300 [Artemisia annua]3.3e-0954.55Show/hide
Query:  WYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSSRSTCFPRHWKSRPA
        W    +     NRRGLS GS LLAE NG EGGW+ +   GR      +   PGKEE KK LSS ST FPR WKSRPA
Subjt:  WYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSSRSTCFPRHWKSRPA

TrEMBL top hitse value%identityAlignment
A0A218VQK5 Uncharacterized protein7.5e-2372.73Show/hide
Query:  TAGNSRGSPLEVFAGNQSVSFPQPLWYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFLGRAEGEGHKRRFPGK
        T     GSPLE FAGNQSVSFPQPLWYFA  FF LC  RG   GSPLLAEMNG EGGWV F GRA GEGHKRR P +
Subjt:  TAGNSRGSPLEVFAGNQSVSFPQPLWYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFLGRAEGEGHKRRFPGK

A0A251U9Z7 Uncharacterized protein7.3e-1054.55Show/hide
Query:  WYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSSRSTCFPRHWKSRPA
        W    +     NRRGLS GS LLAEMNG EGGW+ +   GR      +   P KEE KK LSS ST FPR WKSRPA
Subjt:  WYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSSRSTCFPRHWKSRPA

A0A2J6MIM4 Uncharacterized protein1.5e-1055.84Show/hide
Query:  WYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSSRSTCFPRHWKSRPA
        W    +     NRRGLS GS LLAEMNG EGGW+ +   GR      +   PGKEE KK LSS ST FPR WKSRPA
Subjt:  WYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSSRSTCFPRHWKSRPA

A0A2U1NJ56 Uncharacterized protein1.6e-0954.55Show/hide
Query:  WYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSSRSTCFPRHWKSRPA
        W    +     NRRGLS GS LLAE NG EGGW+ +   GR      +   PGKEE KK LSS ST FPR WKSRPA
Subjt:  WYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSSRSTCFPRHWKSRPA

A0A6S7M181 Uncharacterized protein1.2e-1752.63Show/hide
Query:  SPLEVFAGNQSVSFPQPLWYFAYRF-------------------FSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSS
        SPLE FAGNQSVSFPQPLW   +R                        NRRGLS GS LLAEMNG EGGW+ +   GR      +   PGKEE +K LSS
Subjt:  SPLEVFAGNQSVSFPQPLWYFAYRF-------------------FSLCNRRGLSFGSPLLAEMNGLEGGWVRFL--GRAEGEGHKRRFPGKEEKKKVLSS

Query:  RSTCFPRHWKSRPA
         ST FPR WKSRPA
Subjt:  RSTCFPRHWKSRPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGAAACCGCCGGAAACTCGAGAGGGTCGCCTTTGGAAGTGTTCGCCGGTAACCAAAGCGTATCGTTCCCACAACCACTTTGGTACTTTGCTTATCGCTTTTTTAG
CTTATGCAATAGAAGGGGGCTTAGCTTTGGATCCCCCCTGCTTGCAGAAATGAATGGATTAGAAGGAGGCTGGGTTCGATTTCTGGGCCGGGCAGAAGGTGAAGGCCATA
AGAGAAGATTCCCCGGTAAGGAAGAGAAGAAAAAGGTGTTGTCATCGAGATCGACCTGTTTCCCGAGGCATTGGAAATCCAGACCGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGGAAACCGCCGGAAACTCGAGAGGGTCGCCTTTGGAAGTGTTCGCCGGTAACCAAAGCGTATCGTTCCCACAACCACTTTGGTACTTTGCTTATCGCTTTTTTAG
CTTATGCAATAGAAGGGGGCTTAGCTTTGGATCCCCCCTGCTTGCAGAAATGAATGGATTAGAAGGAGGCTGGGTTCGATTTCTGGGCCGGGCAGAAGGTGAAGGCCATA
AGAGAAGATTCCCCGGTAAGGAAGAGAAGAAAAAGGTGTTGTCATCGAGATCGACCTGTTTCCCGAGGCATTGGAAATCCAGACCGGCTTAG
Protein sequenceShow/hide protein sequence
MTETAGNSRGSPLEVFAGNQSVSFPQPLWYFAYRFFSLCNRRGLSFGSPLLAEMNGLEGGWVRFLGRAEGEGHKRRFPGKEEKKKVLSSRSTCFPRHWKSRPA