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Clc09G19453 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G19453
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:32923351..32923748
RNA-Seq ExpressionClc09G19453
SyntenyClc09G19453
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571144.1 hypothetical protein SDJN03_30059, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1471.23Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNNHMADSDDTETTTLSESTICLLIDRFAP
        MSAMVESWMSELGKWKNRVEAQ  KKKPLMPKS     +Q  Q++   A SDDTET    E+TICLLIDRFAP
Subjt:  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNNHMADSDDTETTTLSESTICLLIDRFAP

KAG6605111.1 hypothetical protein SDJN03_02428, partial [Cucurbita argyrosperma subsp. sororia]7.5e-1255.34Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNNHM---ADSDDTETTTLSESTICLLID-----RFAPL------------EDRGGE
        M+AMVESWMSELGKWKNRVEAQ  KKKPLMPKSK      LK+S N++   ADSDD E  TLS+STI  + D     R AP             E+RGG+
Subjt:  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNNHM---ADSDDTETTTLSESTICLLID-----RFAPL------------EDRGGE

Query:  YGG
         GG
Subjt:  YGG

KGN61756.1 hypothetical protein Csa_006080 [Cucumis sativus]2.7e-2281.58Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQ-NNKKKPLMPKSKQLQLHQLKQ-SNNHMADSDDTETTTLSESTICLLIDRFAPL
        MSAMVESWM+ELGKW+NRVEAQ NN KKPLMPKSKQLQ    KQ +  HMADSDDTET+ LSESTICLLIDRFAPL
Subjt:  MSAMVESWMSELGKWKNRVEAQ-NNKKKPLMPKSKQLQLHQLKQ-SNNHMADSDDTETTTLSESTICLLIDRFAPL

OMO75267.1 hypothetical protein CCACVL1_16259 [Corchorus capsularis]3.4e-0443.42Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNN---HMADSDDTETTTLSESTICLLIDRFAP
        MSA+V  WM EL K K +V+A   +++PL   S+  +  QL +  +     A  DDT  TT+SE+T+CLL+DRF P
Subjt:  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNN---HMADSDDTETTTLSESTICLLIDRFAP

TrEMBL top hitse value%identityAlignment
A0A0A0LP24 Uncharacterized protein1.3e-2281.58Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQ-NNKKKPLMPKSKQLQLHQLKQ-SNNHMADSDDTETTTLSESTICLLIDRFAPL
        MSAMVESWM+ELGKW+NRVEAQ NN KKPLMPKSKQLQ    KQ +  HMADSDDTET+ LSESTICLLIDRFAPL
Subjt:  MSAMVESWMSELGKWKNRVEAQ-NNKKKPLMPKSKQLQLHQLKQ-SNNHMADSDDTETTTLSESTICLLIDRFAPL

A0A1R3HY48 Uncharacterized protein1.6e-0443.42Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNN---HMADSDDTETTTLSESTICLLIDRFAP
        MSA+V  WM EL K K +V+A   +++PL   S+  +  QL +  +     A  DDT  TT+SE+T+CLL+DRF P
Subjt:  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNN---HMADSDDTETTTLSESTICLLIDRFAP

A0A1R3JBF3 Uncharacterized protein1.6e-0443.42Show/hide
Query:  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNN---HMADSDDTETTTLSESTICLLIDRFAP
        MSA+V  WM EL K K +V+A   +++PL   S+  +  QL +  +     A  DDT  TT+SE+T+CLL+DRF P
Subjt:  MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNN---HMADSDDTETTTLSESTICLLIDRFAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCAATGGTAGAGTCATGGATGAGCGAGCTGGGGAAATGGAAAAACAGAGTTGAAGCTCAAAACAACAAGAAGAAGCCATTGATGCCCAAATCCAAGCAACTGCA
ACTACATCAACTCAAACAATCCAATAATCACATGGCGGATTCCGACGACACAGAAACCACCACCCTCTCTGAATCCACCATTTGTTTGCTCATAGATCGTTTTGCTCCCT
TGGAGGACAGAGGAGGAGAGTACGGTGGCCAGTCGTTCTTCTCTTCTCTCGCAGGTGTCGGTGCCGTTGCCGTGGTTGGAAACTTCTGGCTTTCGGTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCAATGGTAGAGTCATGGATGAGCGAGCTGGGGAAATGGAAAAACAGAGTTGAAGCTCAAAACAACAAGAAGAAGCCATTGATGCCCAAATCCAAGCAACTGCA
ACTACATCAACTCAAACAATCCAATAATCACATGGCGGATTCCGACGACACAGAAACCACCACCCTCTCTGAATCCACCATTTGTTTGCTCATAGATCGTTTTGCTCCCT
TGGAGGACAGAGGAGGAGAGTACGGTGGCCAGTCGTTCTTCTCTTCTCTCGCAGGTGTCGGTGCCGTTGCCGTGGTTGGAAACTTCTGGCTTTCGGTTCTTTAA
Protein sequenceShow/hide protein sequence
MSAMVESWMSELGKWKNRVEAQNNKKKPLMPKSKQLQLHQLKQSNNHMADSDDTETTTLSESTICLLIDRFAPLEDRGGEYGGQSFFSSLAGVGAVAVVGNFWLSVL