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Clc09G19457 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G19457
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:32935449..32935667
RNA-Seq ExpressionClc09G19457
SyntenyClc09G19457
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571144.1 hypothetical protein SDJN03_30059, partial [Cucurbita argyrosperma subsp. sororia]9.2e-1466.2Show/hide
Query:  MSGMVESWMKQLGKWKNRVEAQRKKKPLMSKSNQLLPPTHLKQTTDSDSDDTETTTLSESTICLLMDRFAP
        MS MVESWM +LGKWKNRVEAQ+KKKPLM KSNQ L          + SDDTET    E+TICLL+DRFAP
Subjt:  MSGMVESWMKQLGKWKNRVEAQRKKKPLMSKSNQLLPPTHLKQTTDSDSDDTETTTLSESTICLLMDRFAP
KAG6605111.1 hypothetical protein SDJN03_02428, partial [Cucurbita argyrosperma subsp. sororia]2.7e-0556.94Show/hide
Query:  MSGMVESWMKQLGKWKNRVEAQRKKKPLMSKSNQLLPPTHLKQTTD-----SDSDDTETTTLSESTICLLMD
        M+ MVESWM +LGKWKNRVEAQ KKKPLM KS +L     LK++ +     +DSDD E  TLS+STI  + D
Subjt:  MSGMVESWMKQLGKWKNRVEAQRKKKPLMSKSNQLLPPTHLKQTTD-----SDSDDTETTTLSESTICLLMD
KGN61756.1 hypothetical protein Csa_006080 [Cucumis sativus]5.4e-1467.53Show/hide
Query:  MSGMVESWMKQLGKWKNRVEAQ--RKKKPLMSKSNQLLPPTHLKQ---TTDSDSDDTETTTLSESTICLLMDRFAPM
        MS MVESWM +LGKW+NRVEAQ    KKPLM KS Q L   H KQ   T  +DSDDTET+ LSESTICLL+DRFAP+
Subjt:  MSGMVESWMKQLGKWKNRVEAQ--RKKKPLMSKSNQLLPPTHLKQ---TTDSDSDDTETTTLSESTICLLMDRFAPM
OMO75267.1 hypothetical protein CCACVL1_16259 [Corchorus capsularis]1.7e-0445.95Show/hide
Query:  MSGMVESWMKQLGKWKNRVEAQRKKKPLMS---KSNQLLPPTHLKQTTDSDSDDTETTTLSESTICLLMDRFAP
        MS +V  WM +L K K +V+A+R+   L S   K  QL    H++Q  ++  DDT  TT+SE+T+CLLMDRF P
Subjt:  MSGMVESWMKQLGKWKNRVEAQRKKKPLMS---KSNQLLPPTHLKQTTDSDSDDTETTTLSESTICLLMDRFAP
TrEMBL top hitse value%identityAlignment
A0A0A0LP24 Uncharacterized protein2.6e-1467.53Show/hide
Query:  MSGMVESWMKQLGKWKNRVEAQ--RKKKPLMSKSNQLLPPTHLKQ---TTDSDSDDTETTTLSESTICLLMDRFAPM
        MS MVESWM +LGKW+NRVEAQ    KKPLM KS Q L   H KQ   T  +DSDDTET+ LSESTICLL+DRFAP+
Subjt:  MSGMVESWMKQLGKWKNRVEAQ--RKKKPLMSKSNQLLPPTHLKQ---TTDSDSDDTETTTLSESTICLLMDRFAPM
A0A1R3HY48 Uncharacterized protein8.4e-0545.95Show/hide
Query:  MSGMVESWMKQLGKWKNRVEAQRKKKPLMS---KSNQLLPPTHLKQTTDSDSDDTETTTLSESTICLLMDRFAP
        MS +V  WM +L K K +V+A+R+   L S   K  QL    H++Q  ++  DDT  TT+SE+T+CLLMDRF P
Subjt:  MSGMVESWMKQLGKWKNRVEAQRKKKPLMS---KSNQLLPPTHLKQTTDSDSDDTETTTLSESTICLLMDRFAP
A0A1R3JBF3 Uncharacterized protein8.4e-0545.95Show/hide
Query:  MSGMVESWMKQLGKWKNRVEAQRKKKPLMS---KSNQLLPPTHLKQTTDSDSDDTETTTLSESTICLLMDRFAP
        MS +V  WM +L K K +V+A+R+   L S   K  QL    H++Q  ++  DDT  TT+SE+T+CLLMDRF P
Subjt:  MSGMVESWMKQLGKWKNRVEAQRKKKPLMS---KSNQLLPPTHLKQTTDSDSDDTETTTLSESTICLLMDRFAP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGCATGGTAGAGTCATGGATGAAGCAGCTTGGAAAGTGGAAGAACAGAGTTGAAGCTCAACGGAAGAAGAAGCCATTGATGTCCAAATCCAACCAATTACTGCC
CCCAACACACCTCAAACAAACCACAGATTCCGATTCCGACGACACAGAAACCACCACCCTCTCCGAATCCACCATTTGTTTGCTCATGGATCGCTTTGCTCCCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGCATGGTAGAGTCATGGATGAAGCAGCTTGGAAAGTGGAAGAACAGAGTTGAAGCTCAACGGAAGAAGAAGCCATTGATGTCCAAATCCAACCAATTACTGCC
CCCAACACACCTCAAACAAACCACAGATTCCGATTCCGACGACACAGAAACCACCACCCTCTCCGAATCCACCATTTGTTTGCTCATGGATCGCTTTGCTCCCATGTAA
Protein sequenceShow/hide protein sequence
MSGMVESWMKQLGKWKNRVEAQRKKKPLMSKSNQLLPPTHLKQTTDSDSDDTETTTLSESTICLLMDRFAPM