; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G19620 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G19620
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:33100901..33105024
RNA-Seq ExpressionClc09G19620
SyntenyClc09G19620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5448753.1 hypothetical protein F2P56_029258 [Juglans regia]3.4e-1647.66Show/hide
Query:  PVTPASSLPPTPTTRCTHFLVKVELDFTVAERHRELGTTWVKIKTTSFAVVNEASDILLTGIAESWSVAGLARHELEGALGVERV---GGRDGTMHMEVE
        P+ PA   PPT   RC +FL+++EL+F + E H ELG TWV+IK    AVV++  D+L   IA +  VA   R ELE A GVERV    GR  T+H+EVE
Subjt:  PVTPASSLPPTPTTRCTHFLVKVELDFTVAERHRELGTTWVKIKTTSFAVVNEASDILLTGIAESWSVAGLARHELEGALGVERV---GGRDGTMHMEVE

Query:  VTDRAFV
        V    F+
Subjt:  VTDRAFV
PON76915.1 hypothetical protein PanWU01x14_032350, partial [Parasponia andersonii]2.8e-0757.14Show/hide
Query:  NEASDILLTGIAESWSVAGLARHELEGALGVERV--GGR-DGTMHMEVEVTDRAFVTRAYTNLLAAITLE
        +E  DILL G+A +  VAG  + ELEGALGVERV  GGR DG +H+EVEVTD   V  +  +LLAA+ LE
Subjt:  NEASDILLTGIAESWSVAGLARHELEGALGVERV--GGR-DGTMHMEVEVTDRAFVTRAYTNLLAAITLE
TrEMBL top hitse value%identityAlignment
A0A2P5DUE8 Uncharacterized protein (Fragment)1.4e-0757.14Show/hide
Query:  NEASDILLTGIAESWSVAGLARHELEGALGVERV--GGR-DGTMHMEVEVTDRAFVTRAYTNLLAAITLE
        +E  DILL G+A +  VAG  + ELEGALGVERV  GGR DG +H+EVEVTD   V  +  +LLAA+ LE
Subjt:  NEASDILLTGIAESWSVAGLARHELEGALGVERV--GGR-DGTMHMEVEVTDRAFVTRAYTNLLAAITLE
A0A7C9DHJ8 Uncharacterized protein1.4e-0450Show/hide
Query:  VVNEASDILLTGIAESWSVAGLARHELEGALGVERVGGR---DGTMHMEVEVTDRAFVTRAYTNLLAAITLE
        +V EASD   T IA     +G  RHE EGA GVERV  R   +GTMHM++  T+   V R +  LLA ITLE
Subjt:  VVNEASDILLTGIAESWSVAGLARHELEGALGVERVGGR---DGTMHMEVEVTDRAFVTRAYTNLLAAITLE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCATGTGAATCATGGGGCCATGATAAGACCGTATAAAAACGGCGGAAGTGCACTGAATATGAGGGGAGTAAGAGAAAGAGAGAGAGGAAGACCCCATTCTCGACC
AACCGACTGTTCAACTTGTCTCTCACTCCTTGACAATGACAACAATTGGAAAAGGGAAAGTTCACTTTCTGAAAAAGGAAATTTTGCTGAAATTCCGATGCTGGACCCCG
ATGACCCCGGCAATCAGAGCCGTTGGATCTCCCAGCACTGCAGATATAACAGTTTGAACGGCTGTACCAGCCATCTCACAACACCTCTTCATCTTACCCTTGCCCTTGTT
GTGATGAGTCTGAAGAGTATTCTTAAGACTAGGAATTCTTGTCTCCAATTTGATAGATTTCCTTGTTCCAAAATGCAATTCATGCCAGCTCTCCTCAAGCATTTCCTTCA
CACAAGCTACATACCTGTAACTCCAGCTTCTTCCCTTCCGCCCACACCTACGACACGATGCACTCACTTTCTTGTAAAGGTAGAGCTTGATTTCACCGTCGCTGAGCGAC
ATCGGGAGCTTGGCACAACATGGGTGAAGATCAAAACCACAAGCTTTGCAGTGGTAAATGAAGCCAGTGACATCCTTCTCACAGGCATTGCAGAATCGTGGAGTGTTGCC
GGGCTGGCGAGACATGAACTGGAAGGAGCACTTGGTGTAGAAAGGGTAGGTGGAAGGGATGGCACAATGCACATGGAGGTCGAAGTCACAGACCGTGCATTTGTAACGAG
AGCCTATACCAACCTCCTTGCAGCCATCACACTTGAATGGAGACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCATGTGAATCATGGGGCCATGATAAGACCGTATAAAAACGGCGGAAGTGCACTGAATATGAGGGGAGTAAGAGAAAGAGAGAGAGGAAGACCCCATTCTCGACC
AACCGACTGTTCAACTTGTCTCTCACTCCTTGACAATGACAACAATTGGAAAAGGGAAAGTTCACTTTCTGAAAAAGGAAATTTTGCTGAAATTCCGATGCTGGACCCCG
ATGACCCCGGCAATCAGAGCCGTTGGATCTCCCAGCACTGCAGATATAACAGTTTGAACGGCTGTACCAGCCATCTCACAACACCTCTTCATCTTACCCTTGCCCTTGTT
GTGATGAGTCTGAAGAGTATTCTTAAGACTAGGAATTCTTGTCTCCAATTTGATAGATTTCCTTGTTCCAAAATGCAATTCATGCCAGCTCTCCTCAAGCATTTCCTTCA
CACAAGCTACATACCTGTAACTCCAGCTTCTTCCCTTCCGCCCACACCTACGACACGATGCACTCACTTTCTTGTAAAGGTAGAGCTTGATTTCACCGTCGCTGAGCGAC
ATCGGGAGCTTGGCACAACATGGGTGAAGATCAAAACCACAAGCTTTGCAGTGGTAAATGAAGCCAGTGACATCCTTCTCACAGGCATTGCAGAATCGTGGAGTGTTGCC
GGGCTGGCGAGACATGAACTGGAAGGAGCACTTGGTGTAGAAAGGGTAGGTGGAAGGGATGGCACAATGCACATGGAGGTCGAAGTCACAGACCGTGCATTTGTAACGAG
AGCCTATACCAACCTCCTTGCAGCCATCACACTTGAATGGAGACTCTGA
Protein sequenceShow/hide protein sequence
MGHVNHGAMIRPYKNGGSALNMRGVRERERGRPHSRPTDCSTCLSLLDNDNNWKRESSLSEKGNFAEIPMLDPDDPGNQSRWISQHCRYNSLNGCTSHLTTPLHLTLALV
VMSLKSILKTRNSCLQFDRFPCSKMQFMPALLKHFLHTSYIPVTPASSLPPTPTTRCTHFLVKVELDFTVAERHRELGTTWVKIKTTSFAVVNEASDILLTGIAESWSVA
GLARHELEGALGVERVGGRDGTMHMEVEVTDRAFVTRAYTNLLAAITLEWRL