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Clc09G19860 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G19860
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:33364196..33364849
RNA-Seq ExpressionClc09G19860
SyntenyClc09G19860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039487.1 hypothetical protein E6C27_scaffold64G003070 [Cucumis melo var. makuwa]2.4e-1069.64Show/hide
Query:  MAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTK-TGYLNPPPPPPA
        M  ++GHGS V S SLK  GGK RKMMIE+MDYADPGPN NT+ +GYL PPPPP A
Subjt:  MAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTK-TGYLNPPPPPPA

KAG6602500.1 hypothetical protein SDJN03_07733, partial [Cucurbita argyrosperma subsp. sororia]5.8e-1258.54Show/hide
Query:  MGHPKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPPPP
        M HPKIF  LLL  F++L F  G  +E  A    H  Y +S S K+SGGK RK+M+EVMDYADPGPNTNT++GYL PP  PP
Subjt:  MGHPKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPPPP

KGN52468.1 hypothetical protein Csa_007886 [Cucumis sativus]4.0e-2173.49Show/hide
Query:  MGHPKIFST-LLLSCFLLLFFSNGLRVEVMAITVGHGSYVS-SRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPPP
        M HPK+FST LLLSCFLLL F++GL+VE M  ++GHGS V  S SLK  GGK RKMMIE+MDYADPGPNTNT++GYLNPPPPP
Subjt:  MGHPKIFST-LLLSCFLLLFFSNGLRVEVMAITVGHGSYVS-SRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPPP

XP_023527249.1 uncharacterized protein LOC111790540 isoform X1 [Cucurbita pepo subsp. pepo]3.2e-1058.02Show/hide
Query:  PKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPP--PPPP
        PKIF  L     LLLF   G  V  M      G  +SS S K+SGGK RK+M+EVMDYADPGPNTNT++GYL PP  PPPP
Subjt:  PKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPP--PPPP

XP_023527257.1 uncharacterized protein LOC111790540 isoform X2 [Cucurbita pepo subsp. pepo]2.7e-0955.56Show/hide
Query:  PKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPP--PPPP
        PKIF  L     LLLF   G  V  M      G  +SS   ++SGGK RK+M+EVMDYADPGPNTNT++GYL PP  PPPP
Subjt:  PKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPP--PPPP

TrEMBL top hitse value%identityAlignment
A0A0A0KSB7 Uncharacterized protein1.9e-2173.49Show/hide
Query:  MGHPKIFST-LLLSCFLLLFFSNGLRVEVMAITVGHGSYVS-SRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPPP
        M HPK+FST LLLSCFLLL F++GL+VE M  ++GHGS V  S SLK  GGK RKMMIE+MDYADPGPNTNT++GYLNPPPPP
Subjt:  MGHPKIFST-LLLSCFLLLFFSNGLRVEVMAITVGHGSYVS-SRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPPP

A0A0A0LCS0 Uncharacterized protein1.4e-0852.33Show/hide
Query:  MGHPKIFSTLLLSCFLL-LFFSNG----LRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPPP
        MG     S LLL  FL+ L FSNG    LR+ V  +   H S V    L+ESG K R M +E MDYADP PNTN K GY++PPPPP
Subjt:  MGHPKIFSTLLLSCFLL-LFFSNG----LRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPPP

A0A2P5CWE3 Uncharacterized protein6.1e-0744.44Show/hide
Query:  MGHPKIFSTLLLSCFLLLFFSNGLRVEVMAITVGH-GSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPP
        MG     + LL+S F+LLFFS+G     +    GH   + SS  +KE+GG   + MIEV DY++P PNTN + GY+  PPP
Subjt:  MGHPKIFSTLLLSCFLLLFFSNGLRVEVMAITVGH-GSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPP

A0A5D3CUT5 Uncharacterized protein1.2e-1069.64Show/hide
Query:  MAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTK-TGYLNPPPPPPA
        M  ++GHGS V S SLK  GGK RKMMIE+MDYADPGPN NT+ +GYL PPPPP A
Subjt:  MAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTK-TGYLNPPPPPPA

A0A5J5U1X7 Uncharacterized protein2.3e-0643.75Show/hide
Query:  MGHPKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPP
        MG     + LLLS  LLL FS G  +  M  TV      S+  L++      + MIE+MDY DPGPN N +TGY+  PPP
Subjt:  MGHPKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCACCCTAAAATTTTCTCAACTCTTCTCCTTTCATGTTTTCTTCTTCTCTTTTTCTCAAACGGATTAAGGGTGGAAGTGATGGCAATTACTGTGGGACATGGAAG
CTATGTTAGTAGTAGATCACTGAAGGAAAGTGGTGGAAAAATCAGAAAAATGATGATTGAAGTAATGGACTATGCAGATCCAGGGCCAAATACTAATACTAAAACTGGGT
ATCTTAATCCTCCTCCCCCTCCACCAGCTTAA
mRNA sequenceShow/hide mRNA sequence
TCTCACTGCCTTAGTGCTATATACAATCGTGCATTAAATTTCTTTGGATCTGAAGCCTTCCCATAGTTTCCTTTTCATTTCCTTTGATAACTCCAAAACCTTCTCTCTCT
CTCTCTCTCTCTAAAAGTAAAACCAAAAATTTGGTAGAGAGAAAAATTATGGGTCACCCTAAAATTTTCTCAACTCTTCTCCTTTCATGTTTTCTTCTTCTCTTTTTCTC
AAACGGATTAAGGGTGGAAGTGATGGCAATTACTGTGGGACATGGAAGCTATGTTAGTAGTAGATCACTGAAGGAAAGTGGTGGAAAAATCAGAAAAATGATGATTGAAG
TAATGGACTATGCAGATCCAGGGCCAAATACTAATACTAAAACTGGGTATCTTAATCCTCCTCCCCCTCCACCAGCTTAATTAATTTGTAATATTTTTCTGATTTATTAT
TTTCTGTTTCTTTTTTTT
Protein sequenceShow/hide protein sequence
MGHPKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPPPPA