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Clc09G20250 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G20250
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:33828694..33830579
RNA-Seq ExpressionClc09G20250
SyntenyClc09G20250
Gene Ontology termsNA
InterPro domainsIPR031421 - Protein of unknown function DUF4666


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4275102.1 unnamed protein product [Prunus armeniaca]1.6e-0647.83Show/hide
Query:  SSISFRRQGSSGLIWEENVRALEAKTGARATASASLM-SQE----LNRPRAERN--ETPESGLPNSS--SSQERAPQRCSLSSIFGRCLGSP
        SSISFRRQGSSGLIWE+ V+ LE K   + T S +   SQE    L+    ER   ++P   LP +S  S  E+  +RCS S++FGRC+ SP
Subjt:  SSISFRRQGSSGLIWEENVRALEAKTGARATASASLM-SQE----LNRPRAERN--ETPESGLPNSS--SSQERAPQRCSLSSIFGRCLGSP

KAA0039541.1 hypothetical protein E6C27_scaffold64G003660 [Cucumis melo var. makuwa]6.6e-2173.56Show/hide
Query:  SSISFRRQGSSGLIWEENVRALEAKTGARATASASLMSQELNRPRAER-NETPES-GLPNSSSSQ---ERAPQRCSLSSIFGRCLGS
        SSISFRRQGSSG IWE+NVR LE KT ARATASAS+MSQELNR R ER +ETP+S GL NSSS+    ER PQ+CS SS+FGRC+GS
Subjt:  SSISFRRQGSSGLIWEENVRALEAKTGARATASASLMSQELNRPRAER-NETPES-GLPNSSSSQ---ERAPQRCSLSSIFGRCLGS

KAF3955258.1 hypothetical protein CMV_019505 [Castanea mollissima]3.0e-0537.38Show/hide
Query:  KLSMDSTQGGFEKFN-TALLTLISSISFRRQGSSGLIWEENVRALEAKTGARATASASLMSQELNRPRAERNETPESGLPNSSSSQERAPQRCSLSSIFG
        K  + ST GG    N     +  S +SFRRQGSSGLIW++ ++ L+ K+G              +  R E     +S    S S +E  PQ CS S++FG
Subjt:  KLSMDSTQGGFEKFN-TALLTLISSISFRRQGSSGLIWEENVRALEAKTGARATASASLMSQELNRPRAERNETPESGLPNSSSSQERAPQRCSLSSIFG

Query:  RCLGSPT
        RC GS T
Subjt:  RCLGSPT

KGN52429.1 hypothetical protein Csa_008360 [Cucumis sativus]7.3e-2070Show/hide
Query:  SSISFRRQGSSGLIWEENVRALEAKTGARATASASLMSQELNRPRAERNETPES-GLP--NSSSS-----QERAPQRCSLSSIFGRCLGS
        SSISFRRQGSSGLIWE+NVRALEAKTGARATAS S+MSQEL++   ER+ETP+S GL   NSSSS     +   PQ+CS SS+FGRC+GS
Subjt:  SSISFRRQGSSGLIWEENVRALEAKTGARATASASLMSQELNRPRAERNETPES-GLP--NSSSS-----QERAPQRCSLSSIFGRCLGS

PRQ57542.1 hypothetical protein RchiOBHm_Chr1g0349451 [Rosa chinensis]5.4e-0745.83Show/hide
Query:  SSISFRRQGSSGLIWEENVRALEAKTG-ARATASASLMSQELNRPRAERNE-----------TPESGLPNSSSSQERAPQRCSLSSIFGRCLGSPT
        SS+SFRRQGSSG IWE+ ++ +E K+G A+A  S    + E  R    R +           +P +  PNS   Q +A QRC+LSSIFGRC+GSPT
Subjt:  SSISFRRQGSSGLIWEENVRALEAKTG-ARATASASLMSQELNRPRAERNE-----------TPESGLPNSSSSQERAPQRCSLSSIFGRCLGSPT

TrEMBL top hitse value%identityAlignment
A0A0A0KU28 Uncharacterized protein3.5e-2070Show/hide
Query:  SSISFRRQGSSGLIWEENVRALEAKTGARATASASLMSQELNRPRAERNETPES-GLP--NSSSS-----QERAPQRCSLSSIFGRCLGS
        SSISFRRQGSSGLIWE+NVRALEAKTGARATAS S+MSQEL++   ER+ETP+S GL   NSSSS     +   PQ+CS SS+FGRC+GS
Subjt:  SSISFRRQGSSGLIWEENVRALEAKTGARATASASLMSQELNRPRAERNETPES-GLP--NSSSS-----QERAPQRCSLSSIFGRCLGS

A0A2N9EKT7 Uncharacterized protein1.3e-0641.38Show/hide
Query:  SSISFRRQGSSGLIWEENVRALEAKTGA--RATASASLMSQELNRPRAERNETPESGLPNSSSSQE-RAPQRCSLSSIFGRCLGSPT
        S++SFRRQGSSGLIW++ ++ LE K G    +  S +   ++ +    +R +   S  PN SSS+  +  + CS S++FGRC+GSPT
Subjt:  SSISFRRQGSSGLIWEENVRALEAKTGA--RATASASLMSQELNRPRAERNETPESGLPNSSSSQE-RAPQRCSLSSIFGRCLGSPT

A0A2P6SFT9 Uncharacterized protein2.6e-0745.83Show/hide
Query:  SSISFRRQGSSGLIWEENVRALEAKTG-ARATASASLMSQELNRPRAERNE-----------TPESGLPNSSSSQERAPQRCSLSSIFGRCLGSPT
        SS+SFRRQGSSG IWE+ ++ +E K+G A+A  S    + E  R    R +           +P +  PNS   Q +A QRC+LSSIFGRC+GSPT
Subjt:  SSISFRRQGSSGLIWEENVRALEAKTG-ARATASASLMSQELNRPRAERNE-----------TPESGLPNSSSSQERAPQRCSLSSIFGRCLGSPT

A0A5D3CWI8 Uncharacterized protein3.2e-2173.56Show/hide
Query:  SSISFRRQGSSGLIWEENVRALEAKTGARATASASLMSQELNRPRAER-NETPES-GLPNSSSSQ---ERAPQRCSLSSIFGRCLGS
        SSISFRRQGSSG IWE+NVR LE KT ARATASAS+MSQELNR R ER +ETP+S GL NSSS+    ER PQ+CS SS+FGRC+GS
Subjt:  SSISFRRQGSSGLIWEENVRALEAKTGARATASASLMSQELNRPRAER-NETPES-GLPNSSSSQ---ERAPQRCSLSSIFGRCLGS

A0A6J5UGS2 Uncharacterized protein7.6e-0747.83Show/hide
Query:  SSISFRRQGSSGLIWEENVRALEAKTGARATASASLM-SQE----LNRPRAERN--ETPESGLPNSS--SSQERAPQRCSLSSIFGRCLGSP
        SSISFRRQGSSGLIWE+ V+ LE K   + T S +   SQE    L+    ER   ++P   LP +S  S  E+  +RCS S++FGRC+ SP
Subjt:  SSISFRRQGSSGLIWEENVRALEAKTGARATASASLM-SQE----LNRPRAERN--ETPESGLPNSS--SSQERAPQRCSLSSIFGRCLGSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAGTGTGTGAACGCATTGTGCTATGGCCAACCCCCGGTTATGAAGACTCTATTCATCCAGACTATTTGTGTAAGCTTTCAAAAGCTCTCTATGGACTCAACTCA
AGGAGGCTTTGAAAAATTCAACACAGCACTACTAACATTAATATCATCAATCTCATTCCGGAGGCAAGGTTCGTCCGGCCTCATTTGGGAGGAGAATGTCCGAGCACTCG
AAGCGAAAACCGGTGCTCGGGCCACGGCCTCGGCATCTCTGATGAGCCAAGAATTGAACCGTCCGAGGGCGGAGAGAAATGAAACTCCGGAGTCTGGTTTGCCAAATTCA
TCATCTTCTCAAGAAAGGGCTCCTCAAAGATGCTCTCTTTCTTCTATTTTTGGACGCTGTTTGGGCTCTCCAACCATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAGTGTGTGAACGCATTGTGCTATGGCCAACCCCCGGTTATGAAGACTCTATTCATCCAGACTATTTGTGTAAGCTTTCAAAAGCTCTCTATGGACTCAACTCA
AGGAGGCTTTGAAAAATTCAACACAGCACTACTAACATTAATATCATCAATCTCATTCCGGAGGCAAGGTTCGTCCGGCCTCATTTGGGAGGAGAATGTCCGAGCACTCG
AAGCGAAAACCGGTGCTCGGGCCACGGCCTCGGCATCTCTGATGAGCCAAGAATTGAACCGTCCGAGGGCGGAGAGAAATGAAACTCCGGAGTCTGGTTTGCCAAATTCA
TCATCTTCTCAAGAAAGGGCTCCTCAAAGATGCTCTCTTTCTTCTATTTTTGGACGCTGTTTGGGCTCTCCAACCATTTAG
Protein sequenceShow/hide protein sequence
MQKCVNALCYGQPPVMKTLFIQTICVSFQKLSMDSTQGGFEKFNTALLTLISSISFRRQGSSGLIWEENVRALEAKTGARATASASLMSQELNRPRAERNETPESGLPNS
SSSQERAPQRCSLSSIFGRCLGSPTI