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Clc09G20370 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G20370
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description2S albumin
Genome locationClcChr09:33961001..33961387
RNA-Seq ExpressionClc09G20370
SyntenyClc09G20370
Gene Ontology termsGO:0000322 - storage vacuole (cellular component)
GO:0045735 - nutrient reservoir activity (molecular function)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025475.1 2S albumin precursor [Cucumis melo var. makuwa]6.6e-3966.19Show/hide
Query:  MARLRSIIILLAAALVVASA-----------LDNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELL
        MARL SII LLA ALV+A A            +N    +RCRQMRA+EEIGSC EYL QQSRYVL+MRGI+NQRRRGG+ F+ECC EL NV+EECRCELL
Subjt:  MARLRSIIILLAAALVVASA-----------LDNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELL

Query:  EEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF
        +EIA  E+RK  G E  QM + ARNLPSMCG RPQQCYF
Subjt:  EEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF

XP_011650534.1 2S albumin [Cucumis sativus]2.7e-4066.19Show/hide
Query:  MARLRSIIILLAAALVVASA-----------LDNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELL
        MARL SII LLA ALV+A A            +N GR +RCRQMRA+EEIGSC +YL QQSRYVL+MRGI+NQRRRGG+LF+ECC EL NV+EECRCELL
Subjt:  MARLRSIIILLAAALVVASA-----------LDNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELL

Query:  EEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF
        +EIA  E+R+  G E  QM + A+NLPSMCG+RPQQCYF
Subjt:  EEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF

XP_022932144.1 2S albumin-like [Cucurbita moschata]2.1e-3763.57Show/hide
Query:  MARLRSIIILLAAALVVASAL------------DNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCEL
        MARL  II L+  A++V+ A             DN+ R +RC QMRA EEIGSC +YL QQSR VL+MRGIENQRRR G++F+ECC ELRNVDE+CRCEL
Subjt:  MARLRSIIILLAAALVVASAL------------DNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCEL

Query:  LEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF
        LE+IA  E RKG   E RQM +RARNLPSMCG+RPQQCYF
Subjt:  LEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF

XP_023520423.1 2S albumin-like [Cucurbita pepo subsp. pepo]3.6e-3762.86Show/hide
Query:  MARLRSIIILLAAALVVASAL------------DNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCEL
        MARL  I+ L+  A++V+ A             DN+ R +RC QMRA EEIGSC +YL QQSR VL+MRGIENQRRR G++F+ECC ELRNVDE+CRCEL
Subjt:  MARLRSIIILLAAALVVASAL------------DNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCEL

Query:  LEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF
        LE+IA  E RKG   E RQM +RARNLPSMCG+RPQQCYF
Subjt:  LEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF

XP_038889520.1 2S albumin-like [Benincasa hispida]8.9e-4471.23Show/hide
Query:  MARLRSIIILLA---AALVVASALD-------------NQGRQQRCRQMRAQEEIGSCQEYLRQQSR--YVLEMRGIENQRRRGGELFNECCHELRNVDE
        MA+L SI+I+ A     LVVA A               NQ + +RCRQMRA+EEIG C EYL QQSR  YVLEMRGIENQRRRGGEL NECC+ELRNVDE
Subjt:  MARLRSIIILLA---AALVVASALD-------------NQGRQQRCRQMRAQEEIGSCQEYLRQQSR--YVLEMRGIENQRRRGGELFNECCHELRNVDE

Query:  ECRCELLEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF
        ECRCELLEEI  MERRKGGG EERQMF+RARNLPSMCGIRPQQCYF
Subjt:  ECRCELLEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF

TrEMBL top hitse value%identityAlignment
A0A0A0L7Q2 AAI domain-containing protein1.3e-4066.19Show/hide
Query:  MARLRSIIILLAAALVVASA-----------LDNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELL
        MARL SII LLA ALV+A A            +N GR +RCRQMRA+EEIGSC +YL QQSRYVL+MRGI+NQRRRGG+LF+ECC EL NV+EECRCELL
Subjt:  MARLRSIIILLAAALVVASA-----------LDNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELL

Query:  EEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF
        +EIA  E+R+  G E  QM + A+NLPSMCG+RPQQCYF
Subjt:  EEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF

A0A0U1Z284 Alpha-amylase inhibitor2.8e-3560.28Show/hide
Query:  MARLRSIIILLAAALVVASAL-------------DNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCE
        MARL  II LLA AL+V  A              DNQGRQQRCRQM A+E++ SC++YLRQQSR VL MRGI+N RR+ G  F+ECC ELRNVDE+CRC+
Subjt:  MARLRSIIILLAAALVVASAL-------------DNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCE

Query:  LLEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF
        LLEEIA  E+R+  G E RQ+ ++ARNLPSMCG+RP +C F
Subjt:  LLEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF

A0A5A7SLZ0 2S albumin3.2e-3966.19Show/hide
Query:  MARLRSIIILLAAALVVASA-----------LDNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELL
        MARL SII LLA ALV+A A            +N    +RCRQMRA+EEIGSC EYL QQSRYVL+MRGI+NQRRRGG+ F+ECC EL NV+EECRCELL
Subjt:  MARLRSIIILLAAALVVASA-----------LDNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELL

Query:  EEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF
        +EIA  E+RK  G E  QM + ARNLPSMCG RPQQCYF
Subjt:  EEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF

A0A6J1EW73 2S albumin-like1.0e-3763.57Show/hide
Query:  MARLRSIIILLAAALVVASAL------------DNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCEL
        MARL  II L+  A++V+ A             DN+ R +RC QMRA EEIGSC +YL QQSR VL+MRGIENQRRR G++F+ECC ELRNVDE+CRCEL
Subjt:  MARLRSIIILLAAALVVASAL------------DNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCEL

Query:  LEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF
        LE+IA  E RKG   E RQM +RARNLPSMCG+RPQQCYF
Subjt:  LEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF

A0A6J1JVR2 2S albumin9.6e-3661.7Show/hide
Query:  MARLRSIIILLAAALVVASAL-------------DNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCE
        MARL SII L A AL+VA A              + QGR++RCRQM A+EE+ SC++YLRQQSR VL+MRGIEN  RR G  F+ECC ELRNVDEECRC+
Subjt:  MARLRSIIILLAAALVVASAL-------------DNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCE

Query:  LLEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF
        +LEEIA  E+R+  G E RQM ++ARNLPSMCGIRPQ+C F
Subjt:  LLEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF

SwissProt top hitse value%identityAlignment
P01089 2S albumin9.6e-0935.24Show/hide
Query:  QQRCR-QMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELLEEIAGMERRKG--GGLEERQMFERARNLPSMCGIRP
        QQ CR Q++ Q+ +  CQEY++QQ       R    +R   G     CC  L+ +  +CRCE L +    ++ +G   G +  + F  A NLPSMCG+ P
Subjt:  QQRCR-QMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELLEEIAGMERRKG--GGLEERQMFERARNLPSMCGIRP

Query:  QQCYF
         +C F
Subjt:  QQCYF

P0C8Y8 2S sulfur-rich seed storage protein 22.8e-0837.74Show/hide
Query:  QQRCR-QMRAQEEIGSCQEYLRQQSRYVLEMRGIENQR--RRGGE-LFNECCHELRNVDEECRCELLEEIAGMERRKG--GGLEERQMFERARNLPSMCG
        +Q+CR QM  Q+++  C+ YLRQQ    +E    +N R  RRG E   +ECC +L  +DE CRCE L  +   +R +    G + +++  +A NL S C 
Subjt:  QQRCR-QMRAQEEIGSCQEYLRQQSRYVLEMRGIENQR--RRGGE-LFNECCHELRNVDEECRCELLEEIAGMERRKG--GGLEERQMFERARNLPSMCG

Query:  IRPQQC
        + PQ+C
Subjt:  IRPQQC

P15461 2S seed storage protein3.3e-0933.33Show/hide
Query:  QRCRQMRAQEEIGSCQEYLRQQ-------SRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELLEEIA---------GMERRKG--GGLEERQMF
        Q+CR+   Q  +G CQ ++ QQ       +R   +  G + Q++RG  L  +CC+EL+NV  EC CE ++E+A           ++R+G  GG E     
Subjt:  QRCRQMRAQEEIGSCQEYLRQQ-------SRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELLEEIA---------GMERRKG--GGLEERQMF

Query:  ERARNLPSMCGIRPQQC
           +NLP+ C +  QQC
Subjt:  ERARNLPSMCGIRPQQC

P93198 2S albumin seed storage protein (Fragment)3.0e-1035.29Show/hide
Query:  LLAAALVVASA---------------LDNQGRQ-QRCR-QMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELLEEI
        LL A L VA+A               +DN  R+ + CR Q++ Q+ +  CQ YLRQQSR      G +   +R  + F +CC +L  +DE+C+CE L ++
Subjt:  LLAAALVVASA---------------LDNQGRQ-QRCR-QMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELLEEI

Query:  AGMERRKGG--GLEERQMFERARNLPSMCGIRPQQC
           ++++ G  G E  +M + AR+LP+ CGI  Q+C
Subjt:  AGMERRKGG--GLEERQMFERARNLPSMCGIRPQQC

Q39649 2S albumin4.4e-3860.99Show/hide
Query:  MARLRSIIILLAAALVVASAL-------------DNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCE
        MARL SII L A AL+VA A              + QGR++RCRQM A+EE+ SC++YLRQQSR VL+MRGIEN  RR G  F+ECC EL+NVDEECRC+
Subjt:  MARLRSIIILLAAALVVASAL-------------DNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCE

Query:  LLEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF
        +LEEIA  E+R+  G E RQM ++ARNLPSMCGIRPQ+C F
Subjt:  LLEEIAGMERRKGGGLEERQMFERARNLPSMCGIRPQQCYF

Arabidopsis top hitse value%identityAlignment
AT4G27140.1 seed storage albumin 11.3e-0526.17Show/hide
Query:  RQQRCR-QMRAQEEIGSCQEYLRQQSR--------YVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELLEEIAGMERRKG--GGLEERQMFERARN
        + ++CR + + ++ + +CQ+ + QQ+R        +  +M   + Q++   +LF +CC+ELR  + +C C  L++ A   R +G    ++ R++++ A++
Subjt:  RQQRCR-QMRAQEEIGSCQEYLRQQSR--------YVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELLEEIAGMERRKG--GGLEERQMFERARN

Query:  LPSMCGI
        LP++C I
Subjt:  LPSMCGI

AT4G27150.1 seed storage albumin 24.3e-0426.67Show/hide
Query:  ALDNQGRQQRC-RQMRAQEEIGSCQEYLRQQSR------------YVLEMRGIENQR--RRGGELFNECCHELRNVDEECRCELLEEIAGMERRKG--GG
        A +  G +Q+C ++ +  + + +CQ+ +R Q R            + LE   IEN +  ++G ++  +CC ELR  +  C C  L + A     +G  G 
Subjt:  ALDNQGRQQRC-RQMRAQEEIGSCQEYLRQQSR------------YVLEMRGIENQR--RRGGELFNECCHELRNVDEECRCELLEEIAGMERRKG--GG

Query:  LEERQMFERARNLPSMCGIR
         + R++++ A+ LP++C I+
Subjt:  LEERQMFERARNLPSMCGIR

AT4G27160.1 seed storage albumin 33.3e-0426.17Show/hide
Query:  GRQQRC-RQMRAQEEIGSCQEYLRQQSRY------VLEMRGIENQRRRGGELFNECCHELRNVDEECRCELLEEIAGMERRKG--GGLEERQMFERARNL
        G +QRC ++ +  + + +CQ ++ +Q R        L+        ++G +L  +CC+ELR  +  C C  L++ A     +G  G  + R++++ A+ L
Subjt:  GRQQRC-RQMRAQEEIGSCQEYLRQQSRY------VLEMRGIENQRRRGGELFNECCHELRNVDEECRCELLEEIAGMERRKG--GGLEERQMFERARNL

Query:  PSMCGIR
        P++C I+
Subjt:  PSMCGIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGACTCAGGAGCATCATTATCCTCTTGGCAGCAGCTTTGGTGGTTGCAAGTGCCTTGGACAACCAAGGGCGGCAGCAGCGGTGTCGGCAAATGAGGGCCCAGGA
GGAGATCGGGAGCTGCCAAGAGTACCTGAGGCAGCAAAGCAGGTACGTTTTGGAGATGCGTGGAATCGAAAACCAAAGGAGGAGAGGAGGAGAGTTGTTCAATGAGTGTT
GCCATGAGCTTAGGAATGTGGATGAAGAGTGTAGGTGTGAACTGTTGGAGGAGATTGCTGGGATGGAGAGGAGGAAAGGAGGAGGGCTAGAAGAAAGGCAGATGTTTGAG
AGAGCTAGAAACTTGCCATCCATGTGTGGGATCCGCCCACAGCAATGCTACTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGACTCAGGAGCATCATTATCCTCTTGGCAGCAGCTTTGGTGGTTGCAAGTGCCTTGGACAACCAAGGGCGGCAGCAGCGGTGTCGGCAAATGAGGGCCCAGGA
GGAGATCGGGAGCTGCCAAGAGTACCTGAGGCAGCAAAGCAGGTACGTTTTGGAGATGCGTGGAATCGAAAACCAAAGGAGGAGAGGAGGAGAGTTGTTCAATGAGTGTT
GCCATGAGCTTAGGAATGTGGATGAAGAGTGTAGGTGTGAACTGTTGGAGGAGATTGCTGGGATGGAGAGGAGGAAAGGAGGAGGGCTAGAAGAAAGGCAGATGTTTGAG
AGAGCTAGAAACTTGCCATCCATGTGTGGGATCCGCCCACAGCAATGCTACTTCTAA
Protein sequenceShow/hide protein sequence
MARLRSIIILLAAALVVASALDNQGRQQRCRQMRAQEEIGSCQEYLRQQSRYVLEMRGIENQRRRGGELFNECCHELRNVDEECRCELLEEIAGMERRKGGGLEERQMFE
RARNLPSMCGIRPQQCYF