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Clc09G20550 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G20550
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:34096159..34096581
RNA-Seq ExpressionClc09G20550
SyntenyClc09G20550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602453.1 hypothetical protein SDJN03_07686, partial [Cucurbita argyrosperma subsp. sororia]7.0e-1859.35Show/hide
Query:  LSLNLDIASHTATRWAWSLTLARRARRMANRATTAPAAWILHTPTSILLTRRVAIVA-----TAAASSRVAVIAGVLCIRQTLA-YLTLSNGVVHNFFIG
        L LNL IASHTATR A S  LARR   +A RAT A AAWILHTPTSIL TRRV +VA     TAAA   V  IA VL +RQ +A  +TL NG V  F IG
Subjt:  LSLNLDIASHTATRWAWSLTLARRARRMANRATTAPAAWILHTPTSILLTRRVAIVA-----TAAASSRVAVIAGVLCIRQTLA-YLTLSNGVVHNFFIG

Query:  KAKVKKAAEEQKDSEKLGLGKGH
        + KV K  EE K+SE+LG  +GH
Subjt:  KAKVKKAAEEQKDSEKLGLGKGH
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGAGTTCGATTCATGCTGTCCCTCAACCTTGACATTGCTTCTCACACAGCTACAAGATGGGCATGGTCCCTGACATTGGCACGACGGGCAAGAAGGATGGCAAA
TCGAGCCACAACAGCACCTGCTGCCTGGATTCTCCACACACCCACATCCATTTTGCTGACAAGGAGGGTTGCAATAGTCGCCACCGCCGCAGCAAGTTCCCGGGTGGCAG
TAATTGCAGGAGTCCTGTGCATAAGGCAGACGTTGGCCTATCTCACTCTGAGCAATGGGGTTGTCCACAACTTCTTCATTGGCAAAGCCAAGGTGAAGAAGGCTGCAGAA
GAGCAGAAAGATAGTGAGAAACTTGGACTTGGAAAAGGCCATTTCTGCTGCAGCTCTCTTTGTTTTCTTGGTCAGGCTATGAATGGATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAGAGTTCGATTCATGCTGTCCCTCAACCTTGACATTGCTTCTCACACAGCTACAAGATGGGCATGGTCCCTGACATTGGCACGACGGGCAAGAAGGATGGCAAA
TCGAGCCACAACAGCACCTGCTGCCTGGATTCTCCACACACCCACATCCATTTTGCTGACAAGGAGGGTTGCAATAGTCGCCACCGCCGCAGCAAGTTCCCGGGTGGCAG
TAATTGCAGGAGTCCTGTGCATAAGGCAGACGTTGGCCTATCTCACTCTGAGCAATGGGGTTGTCCACAACTTCTTCATTGGCAAAGCCAAGGTGAAGAAGGCTGCAGAA
GAGCAGAAAGATAGTGAGAAACTTGGACTTGGAAAAGGCCATTTCTGCTGCAGCTCTCTTTGTTTTCTTGGTCAGGCTATGAATGGATTGTGA
Protein sequenceShow/hide protein sequence
MIRVRFMLSLNLDIASHTATRWAWSLTLARRARRMANRATTAPAAWILHTPTSILLTRRVAIVATAAASSRVAVIAGVLCIRQTLAYLTLSNGVVHNFFIGKAKVKKAAE
EQKDSEKLGLGKGHFCCSSLCFLGQAMNGL