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Clc09G20580 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G20580
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:34121935..34122241
RNA-Seq ExpressionClc09G20580
SyntenyClc09G20580
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037478.1 hypothetical protein E6C27_scaffold277G00690 [Cucumis melo var. makuwa]1.4e-1482.69Show/hide
Query:  MDLKKCLGTVLIWVACLLAAMTTEAEAQSYGSSDAPEALCSHSMLLKFLGLI
        M+L+KCLG VLIWVACLL +  TEAEAQSYGSSDAPEALCSHSML+KFLGL+
Subjt:  MDLKKCLGTVLIWVACLLAAMTTEAEAQSYGSSDAPEALCSHSMLLKFLGLI
KAE8648896.1 hypothetical protein Csa_008661 [Cucumis sativus]2.3e-1263.89Show/hide
Query:  MDLKKCLGTVLIWVACLLAAMTTEAEAQSYGSSDAPEALCSHSMLLKFLGLIR-----WFEFSDVLSVILYC
        MDL+KCLG VLIWVACLL +M TEAEAQSYGSSDAPEAL SHSML     ++R      FE +D + VI  C
Subjt:  MDLKKCLGTVLIWVACLLAAMTTEAEAQSYGSSDAPEALCSHSMLLKFLGLIR-----WFEFSDVLSVILYC
TrEMBL top hitse value%identityAlignment
A0A0A0KS19 Uncharacterized protein2.0e-1462.11Show/hide
Query:  MDLKKCLGTVLIWVACLLAAMTTEAEAQSYGSSDAPEALCSHSMLLK-FLGLIRWFEFSDVLSVILYCHVRISYCFFFVCLRSFFFVVFEVPVSS
        MDL+KCLG VLIWVACLL +M TEAEAQSYGSSDAPEAL SHSML K  L  +      + L VILYC+V     F  V   S    VFEVPVSS
Subjt:  MDLKKCLGTVLIWVACLLAAMTTEAEAQSYGSSDAPEALCSHSMLLK-FLGLIRWFEFSDVLSVILYCHVRISYCFFFVCLRSFFFVVFEVPVSS
A0A5A7T3W0 Uncharacterized protein6.9e-1582.69Show/hide
Query:  MDLKKCLGTVLIWVACLLAAMTTEAEAQSYGSSDAPEALCSHSMLLKFLGLI
        M+L+KCLG VLIWVACLL +  TEAEAQSYGSSDAPEALCSHSML+KFLGL+
Subjt:  MDLKKCLGTVLIWVACLLAAMTTEAEAQSYGSSDAPEALCSHSMLLKFLGLI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTAAGAAATGTTTGGGTACGGTTCTAATTTGGGTTGCTTGCTTGCTTGCTGCCATGACTACAGAAGCAGAAGCTCAGAGCTATGGCAGCTCTGATGCACCTGA
GGCCTTATGTTCCCACTCCATGCTCCTCAAGTTTCTTGGTCTTATTAGATGGTTTGAGTTCTCTGATGTTCTGTCTGTCATTCTTTACTGTCATGTTAGAATTTCTTACT
GTTTCTTCTTTGTCTGTCTTCGGAGTTTCTTCTTTGTTGTCTTTGAAGTTCCTGTGTCATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTAAGAAATGTTTGGGTACGGTTCTAATTTGGGTTGCTTGCTTGCTTGCTGCCATGACTACAGAAGCAGAAGCTCAGAGCTATGGCAGCTCTGATGCACCTGA
GGCCTTATGTTCCCACTCCATGCTCCTCAAGTTTCTTGGTCTTATTAGATGGTTTGAGTTCTCTGATGTTCTGTCTGTCATTCTTTACTGTCATGTTAGAATTTCTTACT
GTTTCTTCTTTGTCTGTCTTCGGAGTTTCTTCTTTGTTGTCTTTGAAGTTCCTGTGTCATCATAA
Protein sequenceShow/hide protein sequence
MDLKKCLGTVLIWVACLLAAMTTEAEAQSYGSSDAPEALCSHSMLLKFLGLIRWFEFSDVLSVILYCHVRISYCFFFVCLRSFFFVVFEVPVSS