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Clc09G20640 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G20640
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNHL domain protein
Genome locationClcChr09:34164581..34165036
RNA-Seq ExpressionClc09G20640
SyntenyClc09G20640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037502.1 putative NHL domain-containing protein [Cucumis melo var. makuwa]6.7e-7589.73Show/hide
Query:  MSLAQSPDLSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYDP
        MSLAQSPD SSDENGFH +DLHDA F + GCCFWIPCLRSN SQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQF+KNRNRQSTFRYDP
Subjt:  MSLAQSPDLSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYDP

Query:  LSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKD
        LSYSLNFDEGPAH+D F+DDFVRRDFSTRFAA+P+SAKSSMDL KD
Subjt:  LSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKD

KAG6602448.1 hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sororia]2.2e-7384.87Show/hide
Query:  MSLAQSPDLSSDENGFHGDD-LHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYD
        MS++QSPDLSSD NGFH DD LH+AAF SRGCCFW+PCLRSNPS+SWWERIRAADNDDEWWLRGWKRFR+WSEIVAGPKWKTFIRQF+KNR+RQST+RYD
Subjt:  MSLAQSPDLSSDENGFHGDD-LHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYD

Query:  PLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI
        PLSY+LNFDEGPA DDPFS+DF+RRDFS RFA++P+SAKSSMDL KD PSFI
Subjt:  PLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI

XP_016902318.1 PREDICTED: uncharacterized protein LOC107991628 [Cucumis melo]1.6e-7688.74Show/hide
Query:  MSLAQSPDLSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYDP
        MSLAQSPD SSDENGFH +DLHDA F + GCCFWIPCLRSN SQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQF+KNRNRQSTFRYDP
Subjt:  MSLAQSPDLSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYDP

Query:  LSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI
        LSYSLNFDEGPAH+D F+DDFVRRDFSTRFAA+P+SAKSSMDL KD PS I
Subjt:  LSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI

XP_031741765.1 uncharacterized protein LOC116403956 [Cucumis sativus]1.9e-7790.13Show/hide
Query:  MSLAQSPDLSSDENGF-HGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYD
        MSLA SPDLSSDENGF H DDLHDA F +RGCC WIPCLRSN SQSWWERIRAADNDDEWWL+GWKRFREWSEIVAGPKWKTFIRQF+KNRNRQSTFRYD
Subjt:  MSLAQSPDLSSDENGF-HGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYD

Query:  PLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI
        PLSYSLNFDEGPAHDDPF+DDFVRRDFSTRFAA+P+SAKSSMDL KD PSFI
Subjt:  PLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI

XP_038889212.1 uncharacterized protein LOC120079097 [Benincasa hispida]3.7e-8193.38Show/hide
Query:  MSLAQSPDLSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYDP
        MSLAQSPDLSSDEN FHGDDLHDAAFVSRGCC W+PCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEI+AGPKWKTFIRQFNKNRNRQSTFRYDP
Subjt:  MSLAQSPDLSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYDP

Query:  LSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI
        LSYSLNFDEGPAHDDPFSDD VRRDFSTRFAA+P+SAKSSMDL KD P FI
Subjt:  LSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI

TrEMBL top hitse value%identityAlignment
A0A0A0KRY7 Uncharacterized protein9.2e-7890.13Show/hide
Query:  MSLAQSPDLSSDENGF-HGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYD
        MSLA SPDLSSDENGF H DDLHDA F +RGCC WIPCLRSN SQSWWERIRAADNDDEWWL+GWKRFREWSEIVAGPKWKTFIRQF+KNRNRQSTFRYD
Subjt:  MSLAQSPDLSSDENGF-HGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYD

Query:  PLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI
        PLSYSLNFDEGPAHDDPF+DDFVRRDFSTRFAA+P+SAKSSMDL KD PSFI
Subjt:  PLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI

A0A1S4E267 uncharacterized protein LOC1079916287.7e-7788.74Show/hide
Query:  MSLAQSPDLSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYDP
        MSLAQSPD SSDENGFH +DLHDA F + GCCFWIPCLRSN SQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQF+KNRNRQSTFRYDP
Subjt:  MSLAQSPDLSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYDP

Query:  LSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI
        LSYSLNFDEGPAH+D F+DDFVRRDFSTRFAA+P+SAKSSMDL KD PS I
Subjt:  LSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI

A0A5A7T228 Putative NHL domain-containing protein3.3e-7589.73Show/hide
Query:  MSLAQSPDLSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYDP
        MSLAQSPD SSDENGFH +DLHDA F + GCCFWIPCLRSN SQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQF+KNRNRQSTFRYDP
Subjt:  MSLAQSPDLSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYDP

Query:  LSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKD
        LSYSLNFDEGPAH+D F+DDFVRRDFSTRFAA+P+SAKSSMDL KD
Subjt:  LSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKD

A0A6J1HFG4 uncharacterized protein LOC1114625571.8e-7384.87Show/hide
Query:  MSLAQSPDLSSDENGFHGDD-LHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYD
        MS+ QSPDLSSD NGFH DD LH+AAF SRGCCFW+PCLRSNPS+SWWERIRAADNDDEWWLRGWKRFR+WSEIVAGPKWKTFIRQF+KNR+RQST+RYD
Subjt:  MSLAQSPDLSSDENGFHGDD-LHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYD

Query:  PLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI
        PLSY+LNFDEGPA DDPFS+DF+RRDFS RFA++P+SAKSSMDL KD PSFI
Subjt:  PLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI

A0A6J1JTQ3 uncharacterized protein LOC1114874222.0e-7282.89Show/hide
Query:  MSLAQSPDLSSDENGFHGDD-LHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYD
        MS++QSPDLSSD NGFH DD LH+AAF SRGCCFW+PCLRSNPS++WWERIRAADNDDEWWLRGWKRFR+WSEIVAGPKWKTFIRQF+KNR+RQST+RYD
Subjt:  MSLAQSPDLSSDENGFHGDD-LHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYD

Query:  PLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI
        PLSY+LNFD+GPA DDPF +DF+RRDFS RFA++P+SAKSSMDL KD PSFI
Subjt:  PLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)4.7e-3446.01Show/hide
Query:  DDLHDAAFVSRGCCFWIPCLRSNPSQS-----WWERIRAADN---DDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNR--------------------
        DD+H+A F  RGCCF +PCL S+   +     WW+RI   D    D+ WW+RGW+R REWSE+VAGP+WKT+IR+F ++                     
Subjt:  DDLHDAAFVSRGCCFWIPCLRSNPSQS-----WWERIRAADN---DDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNR--------------------

Query:  --NR---QSTFRYDPLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAA--LPSSAKSSMDLDKD
          NR   Q  FRYD LSYSLNFD+G      F D+F  RD+S RFAA  LP S K S+D D D
Subjt:  --NR---QSTFRYDPLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAA--LPSSAKSSMDLDKD

AT3G48020.1 unknown protein1.7e-2042.37Show/hide
Query:  CLRSNPSQSWWERI-RAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNR------QSTFRYDPLSYSLNFDEGPAHDDPFSDDFVRRDFSTR
        C  +    SWW+RI R    +  WW+R + + REWSEIVAGP+WKTFIR+FN++  R         FRYDP+SY+L+F++    DD  +     R FS R
Subjt:  CLRSNPSQSWWERI-RAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNR------QSTFRYDPLSYSLNFDEGPAHDDPFSDDFVRRDFSTR

Query:  FAALP-SSAKSSMDLDKD
        +A++P +S KS   +  D
Subjt:  FAALP-SSAKSSMDLDKD

AT5G14890.1 NHL domain-containing protein7.3e-3550.33Show/hide
Query:  DDLHDAAFVSRGCCFWIPCLRSN----PSQS-WWERIRAADN---DDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNK------------NRNRQSTFRY
        D++H+A F  RGCCF +PCL S+    P+ S WW+RIR  D    D+ WW+ GW + REWSEIVAGPKWKTFIR+F +            NR    +FRY
Subjt:  DDLHDAAFVSRGCCFWIPCLRSN----PSQS-WWERIRAADN---DDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNK------------NRNRQSTFRY

Query:  DPLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAA--LPSSAKSSMDLDKDD
        D  SYSLNFD+G      F D+F  RD+S RFAA  LP S K S+D D D+
Subjt:  DPLSYSLNFDEGPAHDDPFSDDFVRRDFSTRFAA--LPSSAKSSMDLDKDD

AT5G25240.1 unknown protein3.4e-0838.55Show/hide
Query:  SQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNR---NRQSTFRYDPLSYSLNFDEGPAHDDPFSDDFV
        S+  W      +    W     K  +E SE +AGPKWK FIR F+  R    R   F YD  +YSLNFD+G    D   + FV
Subjt:  SQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNR---NRQSTFRYDPLSYSLNFDEGPAHDDPFSDDFV

AT5G62865.1 unknown protein1.6e-2144.12Show/hide
Query:  DAAFVSRGCCFWIPCLRSNPSQ-----SWWERIRAAD---------NDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNR------QSTFRYDPLS
        D  +  R CCF  P  R + S      S W RIR  D         ++  WW+R   + REWSEIVAGP+WKTFIR+FN++  R         F+YDPLS
Subjt:  DAAFVSRGCCFWIPCLRSNPSQ-----SWWERIRAAD---------NDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNR------QSTFRYDPLS

Query:  YSLNFDEGPAHDDPFSDDFV----RRDFSTRFAALP
        YSLNFD     DD   D++V     R FSTRFA++P
Subjt:  YSLNFDEGPAHDDPFSDDFV----RRDFSTRFAALP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTGGCGCAATCTCCCGACCTCTCTTCCGACGAAAATGGCTTCCATGGCGATGACCTTCACGACGCCGCTTTCGTTAGCCGCGGCTGTTGCTTCTGGATCCCTTG
TCTGAGATCCAATCCCTCGCAGTCTTGGTGGGAGCGGATTAGGGCAGCCGATAACGACGATGAATGGTGGCTTAGAGGCTGGAAGAGGTTTCGCGAGTGGTCGGAAATCG
TCGCTGGCCCTAAATGGAAGACTTTCATTCGTCAATTCAATAAGAATCGCAATCGTCAATCCACTTTCCGTTACGATCCTCTAAGTTACTCTCTTAATTTCGACGAAGGT
CCAGCCCACGACGATCCTTTCAGCGACGATTTTGTACGCCGTGATTTCTCCACTCGATTCGCCGCCCTTCCGTCCTCCGCCAAATCGTCTATGGACCTCGATAAGGACGA
TCCGTCCTTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTGGCGCAATCTCCCGACCTCTCTTCCGACGAAAATGGCTTCCATGGCGATGACCTTCACGACGCCGCTTTCGTTAGCCGCGGCTGTTGCTTCTGGATCCCTTG
TCTGAGATCCAATCCCTCGCAGTCTTGGTGGGAGCGGATTAGGGCAGCCGATAACGACGATGAATGGTGGCTTAGAGGCTGGAAGAGGTTTCGCGAGTGGTCGGAAATCG
TCGCTGGCCCTAAATGGAAGACTTTCATTCGTCAATTCAATAAGAATCGCAATCGTCAATCCACTTTCCGTTACGATCCTCTAAGTTACTCTCTTAATTTCGACGAAGGT
CCAGCCCACGACGATCCTTTCAGCGACGATTTTGTACGCCGTGATTTCTCCACTCGATTCGCCGCCCTTCCGTCCTCCGCCAAATCGTCTATGGACCTCGATAAGGACGA
TCCGTCCTTCATTTGA
Protein sequenceShow/hide protein sequence
MSLAQSPDLSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIVAGPKWKTFIRQFNKNRNRQSTFRYDPLSYSLNFDEG
PAHDDPFSDDFVRRDFSTRFAALPSSAKSSMDLDKDDPSFI