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Clc09G20840 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G20840
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProteasome assembly chaperone 3
Genome locationClcChr09:34373021..34375848
RNA-Seq ExpressionClc09G20840
SyntenyClc09G20840
Gene Ontology termsGO:0043248 - proteasome assembly (biological process)
GO:0000502 - proteasome complex (cellular component)
InterPro domainsIPR018788 - Proteasome assembly chaperone 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016194.1 hypothetical protein SDJN02_21299 [Cucurbita argyrosperma subsp. argyrosperma]4.5e-6890.13Show/hide
Query:  MENS-GTRFPVSHKQASTEIKGIKTDIVICRHDDHFL-----VIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWN
        ME+S GTRFPVSHKQAS+EIKGIKTDIV+CRHDDHFL     VI TQIGAMGTMLQARKEEGMAIH TFSVSTVFGKRDEVSQL YS LLLNNAAIDTWN
Subjt:  MENS-GTRFPVSHKQASTEIKGIKTDIVICRHDDHFL-----VIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWN

Query:  FQPMLVACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        FQPMLVACARQLIEQISLSG+YKPLLISLGLKDHSVETMRGIVTAVSEN+LW
Subjt:  FQPMLVACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

XP_011655415.1 uncharacterized protein LOC101204852 isoform X3 [Cucumis sativus]2.2e-5478.77Show/hide
Query:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV
        MENSGTRFPVSHKQAS EIKGIKTDIVICRHDDHFLVI TQIGAMGTMLQARKEEGM I PTFSVSTVFGKRDE                      PM+V
Subjt:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV

Query:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        ACARQLIEQISLSG+YKPLLISLGLKDHSVETM+GIVTAV++NRLW
Subjt:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

XP_022939014.1 uncharacterized protein LOC111445047 isoform X1 [Cucurbita moschata]2.8e-5479.59Show/hide
Query:  MENS-GTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPML
        ME+S GTRFPVSHKQAS+EIKGIKTDIV+CRHDDHFLVI TQIGAMGTMLQARKEEGMAIH TFSVSTVFGKRDE                      PML
Subjt:  MENS-GTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPML

Query:  VACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        VACARQLIEQISLSG+YKPLLISLGLKDHSVETMRGIVTAVSEN+LW
Subjt:  VACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

XP_023525404.1 uncharacterized protein LOC111789023 isoform X1 [Cucurbita pepo subsp. pepo]7.5e-5578.77Show/hide
Query:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV
        ME SGTRFPVSHKQAS EIKGIKTDIVICRHDDHFLVI TQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKR+E                      PML+
Subjt:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV

Query:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        ACARQLIEQISLSG+YKPLLISLGL+DHSVETMRGI++AVSENRLW
Subjt:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

XP_038889612.1 uncharacterized protein LOC120079484 isoform X1 [Benincasa hispida]2.3e-5681.51Show/hide
Query:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV
        MENSGTRFPVSHKQAS EIKGIKTDIVICRHDDHFLVI TQIGAMGTMLQARKEEGMAIH TFSVST+FGKRDE                      PMLV
Subjt:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV

Query:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        ACARQLIEQISLSG+YKPLLISLGLKDHSVETMRGIVTAVSENRLW
Subjt:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

TrEMBL top hitse value%identityAlignment
A0A0A0KUG9 Uncharacterized protein1.1e-5478.77Show/hide
Query:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV
        MENSGTRFPVSHKQAS EIKGIKTDIVICRHDDHFLVI TQIGAMGTMLQARKEEGM I PTFSVSTVFGKRDE                      PM+V
Subjt:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV

Query:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        ACARQLIEQISLSG+YKPLLISLGLKDHSVETM+GIVTAV++NRLW
Subjt:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

A0A1S3AUA3 uncharacterized protein LOC103482762 isoform X13.1e-5478.08Show/hide
Query:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV
        MENSGTRFPVSHKQAS EIKGIKTDIVICRHDDHFLVI TQIGAMGTMLQARKEEGM IHPTFSVSTVFGKRDE                      PMLV
Subjt:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV

Query:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        ACARQLIEQIS+SG+Y+PLLISLGLKD SVETM+GIVTAV++NRLW
Subjt:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

A0A6J1FFU1 uncharacterized protein LOC111445047 isoform X11.4e-5479.59Show/hide
Query:  MENS-GTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPML
        ME+S GTRFPVSHKQAS+EIKGIKTDIV+CRHDDHFLVI TQIGAMGTMLQARKEEGMAIH TFSVSTVFGKRDE                      PML
Subjt:  MENS-GTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPML

Query:  VACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        VACARQLIEQISLSG+YKPLLISLGLKDHSVETMRGIVTAVSEN+LW
Subjt:  VACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

A0A6J1JPF5 uncharacterized protein LOC111487705 isoform X15.2e-5477.4Show/hide
Query:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV
        ME SG+RFP SHKQAS EIKGIKTD+VICRHDDHFLVI TQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKR+E                      PML+
Subjt:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV

Query:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        ACARQLIEQISLSG+YKPLLISLGLKDHSVETMRGI++AVSENRLW
Subjt:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

A0A6J1JTJ3 uncharacterized protein LOC111489603 isoform X12.3e-5479.59Show/hide
Query:  MENS-GTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPML
        ME+S GTRFPVSHKQAS EIKGIKTDIV+CRHDDHFLVI TQIGAMGTMLQARKEEGMAIH TFSVSTVFGKRDE                      PML
Subjt:  MENS-GTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPML

Query:  VACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        VACARQLIEQISLSG+YKPLLISLGLKDHSVETMRGIVTAVSEN+LW
Subjt:  VACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

SwissProt top hitse value%identityAlignment
Q2NKS3 Proteasome assembly chaperone 31.9e-0524.09Show/hide
Query:  VSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLVACARQLIEQ
        ++ KQ +  + G+ T +V      H LV+VTQ+G MGT+        +++ P+ SV++  GK      +  + +LL          +P++   A+ L+  
Subjt:  VSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLVACARQLIEQ

Query:  ISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        +S     + +L++L  KD S+E ++ +   +   ++W
Subjt:  ISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

Q55G88 Proteasome assembly chaperone 31.4e-0826.62Show/hide
Query:  PVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAI-HPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLVACARQLI
        PV  K  S +I  + TDI I    D   + ++Q     T ++A K +G+ +  P++ + T+ G   +V    Y                      ARQLI
Subjt:  PVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAI-HPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLVACARQLI

Query:  EQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        E I  +   K L++S+ + D S +T + I++ + EN++W
Subjt:  EQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

Q9BT73 Proteasome assembly chaperone 33.7e-0422.63Show/hide
Query:  VSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLVACARQLIEQ
        V  KQ +  + G+ T +V      H LV+VTQ G MGT+        +++ P+   S      D    +  + +LL          +P++   A+ L+  
Subjt:  VSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLVACARQLIEQ

Query:  ISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        +S     + +L+++ +KD S+E ++ +   +   ++W
Subjt:  ISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

Q9CZH3 Proteasome assembly chaperone 33.7e-0420.86Show/hide
Query:  VSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTM--LQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLVACARQLI
        V  KQ +  + G+ T +V      H LV+VTQ G MGT+  L+          P  +   + G+                        +P++   A+ L+
Subjt:  VSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTM--LQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLVACARQLI

Query:  EQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
          +S     + +L+++ +KD S+E ++ +   +   ++W
Subjt:  EQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW

Arabidopsis top hitse value%identityAlignment
AT5G14710.1 CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).5.2e-3855.48Show/hide
Query:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV
        ME+  T FPV H++ S E KG KT+IVIC ++DH L+I TQIGAMGT+L ARKEEGM++ PTFSVS +FGKRDE                      PML 
Subjt:  MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLV

Query:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW
        A AR+LIE IS     KPL++SLGLKDHS ET++ IV  V ENRLW
Subjt:  ACARQLIEQISLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACTCGGGTACCCGCTTTCCGGTTTCCCACAAGCAGGCCTCAACGGAGATTAAGGGAATCAAAACGGATATAGTCATTTGTCGCCACGACGATCATTTTCTCGT
TATTGTAACTCAAATTGGAGCAATGGGGACTATGCTGCAAGCCAGGAAGGAGGAGGGGATGGCAATTCATCCAACCTTCTCAGTGTCAACTGTTTTTGGCAAAAGAGATG
AGGTAAGTCAGCTATGTTATAGTGGTTTGTTACTGAATAATGCTGCGATTGACACGTGGAATTTTCAGCCAATGCTGGTCGCATGTGCACGTCAGTTGATTGAACAAATC
AGTTTATCAGGTACATACAAGCCATTACTAATCTCTCTTGGTCTTAAAGATCATTCTGTGGAGACAATGAGAGGCATTGTTACTGCCGTGTCTGAGAATAGACTTTGGTA
A
mRNA sequenceShow/hide mRNA sequence
CAAAGTTAGTGTGCGTAGCAATTTGATTCGATTGACCACAGTCAGAAGACTTTGATTCTTCCTTTCCCCCATGGAAAACTCGGGTACCCGCTTTCCGGTTTCCCACAAGC
AGGCCTCAACGGAGATTAAGGGAATCAAAACGGATATAGTCATTTGTCGCCACGACGATCATTTTCTCGTTATTGTAACTCAAATTGGAGCAATGGGGACTATGCTGCAA
GCCAGGAAGGAGGAGGGGATGGCAATTCATCCAACCTTCTCAGTGTCAACTGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTATGTTATAGTGGTTTGTTACTGAATAA
TGCTGCGATTGACACGTGGAATTTTCAGCCAATGCTGGTCGCATGTGCACGTCAGTTGATTGAACAAATCAGTTTATCAGGTACATACAAGCCATTACTAATCTCTCTTG
GTCTTAAAGATCATTCTGTGGAGACAATGAGAGGCATTGTTACTGCCGTGTCTGAGAATAGACTTTGGTAATATTTGACTTTTGCTGCTTCAGCCCTCATTTTGTTCACA
TATTTATATTCCTACTTTTGTAATATATTTTTTTGATGGGTGGGTGGTTTTGAAGATTTTATGGGCAAATCATACACTTGTTGTCTTGGAGACTTTTTCAAGATCGATAA
GATGATAGACAAGGATGAGACTTCAATTCAATGGTTGAGACTTCAATTCAAT
Protein sequenceShow/hide protein sequence
MENSGTRFPVSHKQASTEIKGIKTDIVICRHDDHFLVIVTQIGAMGTMLQARKEEGMAIHPTFSVSTVFGKRDEVSQLCYSGLLLNNAAIDTWNFQPMLVACARQLIEQI
SLSGTYKPLLISLGLKDHSVETMRGIVTAVSENRLW