; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G21040 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G21040
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLOB domain-containing protein
Genome locationClcChr09:34550085..34554253
RNA-Seq ExpressionClc09G21040
SyntenyClc09G21040
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037575.1 LOB domain-containing protein 25 [Cucumis melo var. makuwa]2.0e-7392.81Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVR
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YASGGARPPSQFGRRAATASM--TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN
        YASG ARPPSQ+GRRA TAS+  TRHHS LSFLSPLSSN HDDPYCH+KEE N
Subjt:  YASGGARPPSQFGRRAATASM--TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN

XP_008458802.1 PREDICTED: LOB domain-containing protein 25 [Cucumis melo]7.5e-7392.16Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVR
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YASGGARPPSQFGRRAATASM--TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN
        YASG ARPPSQ+GRRA TAS+  TRHHS LSFLSPLSSN HDDPYCH+ EE N
Subjt:  YASGGARPPSQFGRRAATASM--TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN

XP_011655399.1 LOB domain-containing protein 25 [Cucumis sativus]8.3e-7292.11Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVR
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YASGGARPPSQFGRRAATASM-TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN
        YASG ARPPSQ+GRRA TAS+ TRHHS LSFLSPLSS+ HD  YCHDKEE N
Subjt:  YASGGARPPSQFGRRAATASM-TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN

XP_022991035.1 LOB domain-containing protein 25-like [Cucurbita maxima]3.2e-6384.77Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PHQREDAVNSLAYEAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVR
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YASGGARPPSQFGRRAATASMTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN
        YASGGARP   +GRRAA        S + F+SPL+SND  DPYCHDKEE+N
Subjt:  YASGGARPPSQFGRRAATASMTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN

XP_038890699.1 LOB domain-containing protein 25-like [Benincasa hispida]7.2e-7696.03Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVR
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YASGGARPPSQFGRRAATASMTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN
        YASGGARPPSQFGRRAATAS+TRHHS LSFLSPLSSNDHD  YCHDKEE N
Subjt:  YASGGARPPSQFGRRAATASMTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN

TrEMBL top hitse value%identityAlignment
A0A0A0KSE8 LOB domain-containing protein4.0e-7292.11Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVR
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YASGGARPPSQFGRRAATASM-TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN
        YASG ARPPSQ+GRRA TAS+ TRHHS LSFLSPLSS+ HD  YCHDKEE N
Subjt:  YASGGARPPSQFGRRAATASM-TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN

A0A1S3C8P8 LOB domain-containing protein 253.6e-7392.16Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVR
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YASGGARPPSQFGRRAATASM--TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN
        YASG ARPPSQ+GRRA TAS+  TRHHS LSFLSPLSSN HDDPYCH+ EE N
Subjt:  YASGGARPPSQFGRRAATASM--TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN

A0A5A7T800 LOB domain-containing protein 259.6e-7492.81Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVR
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YASGGARPPSQFGRRAATASM--TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN
        YASG ARPPSQ+GRRA TAS+  TRHHS LSFLSPLSSN HDDPYCH+KEE N
Subjt:  YASGGARPPSQFGRRAATASM--TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN

A0A6J1E293 LOB domain-containing protein 25-like4.9e-6283.44Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PHQREDAVNSLAYEAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVR
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YASGGARPPSQFGRRAATASMTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN
        YASGGARP   +GRRAA        S + F+SPL++ND  DPYC DKEE N
Subjt:  YASGGARPPSQFGRRAATASMTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN

A0A6J1JRR4 LOB domain-containing protein 25-like1.5e-6384.77Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PHQREDAVNSLAYEAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVR
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YASGGARPPSQFGRRAATASMTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN
        YASGGARP   +GRRAA        S + F+SPL+SND  DPYCHDKEE+N
Subjt:  YASGGARPPSQFGRRAATASMTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN

SwissProt top hitse value%identityAlignment
A2WXT0 LOB domain-containing protein 62.2e-3554.96Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKC  DC+FAPYFPP+ P KF +VH++FGASNV+KLLNE+ P+QREDAVNSLAYEA+ R++DPVYGCV  IS LQR + +LQ++L     +L +
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YASGGARPPSQFGRRAATASMTRHHSDLSFL
        Y    A   +     A+T +    HS   F+
Subjt:  YASGGARPPSQFGRRAATASMTRHHSDLSFL

O04479 Protein ASYMMETRIC LEAVES 21.8e-3767.62Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKC  +C+FAPYFPP++P KFANVHK+FGASNV+KLLNE+ P QREDAVNSLAYEA+ R++DPVYGCVG IS LQ Q+ +LQ +L    ++L +
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YASGG
        Y S G
Subjt:  YASGG

Q32SG3 LOB domain-containing protein 62.2e-3561.82Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKC  DC+FAPYFPP+ P KF +VH++FGASNV+KLLNE+ P QREDAVNSLAYEA+ R++DPVYGCVG IS LQ  + +LQ++L     +L +
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YASGGARPPS
        Y +  A   S
Subjt:  YASGGARPPS

Q8L8Q3 LOB domain-containing protein 251.7e-4879.49Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+L+EV PHQREDAVNSLAYEAEAR+KDPVYGCVGAIS LQRQV+RLQ+EL+ TNADL+R
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YAS--GGARPPSQFGRR
        YA   GG    +  GRR
Subjt:  YAS--GGARPPSQFGRR

Q9FML4 Protein LATERAL ORGAN BOUNDARIES3.1e-4586.14Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  Y
        Y
Subjt:  Y

Arabidopsis top hitse value%identityAlignment
AT3G27650.1 LOB domain-containing protein 251.2e-4979.49Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+L+EV PHQREDAVNSLAYEAEAR+KDPVYGCVGAIS LQRQV+RLQ+EL+ TNADL+R
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  YAS--GGARPPSQFGRR
        YA   GG    +  GRR
Subjt:  YAS--GGARPPSQFGRR

AT5G63090.1 Lateral organ boundaries (LOB) domain family protein2.2e-4686.14Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  Y
        Y
Subjt:  Y

AT5G63090.2 Lateral organ boundaries (LOB) domain family protein2.2e-4686.14Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  Y
        Y
Subjt:  Y

AT5G63090.3 Lateral organ boundaries (LOB) domain family protein2.2e-4686.14Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  Y
        Y
Subjt:  Y

AT5G63090.4 Lateral organ boundaries (LOB) domain family protein2.2e-4686.14Show/hide
Query:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR
        ACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  
Subjt:  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVR

Query:  Y
        Y
Subjt:  Y


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atgtttgtcgatacgattgctaagtgggcaaagaaagatgtgaggcagcttcaaaccaacttctggaggaacgaagcatctcaaaaggcatgcaaattcctaagaagaaa
atgcttagccgattgcatatttgcgccctactttcctcctgaagagccaaccaaatttgccaatgttcacaagatctttggagccagcaatgtgagcaagcttctcaatg
aggtccagccccatcagcgcgaggacgccgtaaattctctagcctacgaggccgaggctcgtatgaaagaccccgtctatggttgtgtcggggccatctccgctctacaa
agacaagtcattcgcttgcagaaagagctcgatgctacaaatgctgatttagtgcgatatgcaagcgggggcgctcgcccgccctcgcaatttggaagaagggcagcaac
tgcctcgatgactcgccatcattctgacctgtcttttctttctcccttgagtagtaatgatcatgatgatccttattgccatgataaagaggaagacaattga
mRNA sequenceShow/hide mRNA sequence
atgtttgtcgatacgattgctaagtgggcaaagaaagatgtgaggcagcttcaaaccaacttctggaggaacgaagcatctcaaaaggcatgcaaattcctaagaagaaa
atgcttagccgattgcatatttgcgccctactttcctcctgaagagccaaccaaatttgccaatgttcacaagatctttggagccagcaatgtgagcaagcttctcaatg
aggtccagccccatcagcgcgaggacgccgtaaattctctagcctacgaggccgaggctcgtatgaaagaccccgtctatggttgtgtcggggccatctccgctctacaa
agacaagtcattcgcttgcagaaagagctcgatgctacaaatgctgatttagtgcgatatgcaagcgggggcgctcgcccgccctcgcaatttggaagaagggcagcaac
tgcctcgatgactcgccatcattctgacctgtcttttctttctcccttgagtagtaatgatcatgatgatccttattgccatgataaagaggaagacaattga
Protein sequenceShow/hide protein sequence
MFVDTIAKWAKKDVRQLQTNFWRNEASQKACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQ
RQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATASMTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN