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Clc09G21050 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G21050
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptioncyclin-dependent protein kinase inhibitor SMR6
Genome locationClcChr09:34560041..34560789
RNA-Seq ExpressionClc09G21050
SyntenyClc09G21050
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016206.1 Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-4187.5Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        MGFSKKSQIDGGFE EGKKWVIAGLP RSSLKPI TKS+AKDG+DDGEK    TPTAKEARIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

Query:  KLRV
        K+RV
Subjt:  KLRV

XP_004142790.1 cyclin-dependent protein kinase inhibitor SMR6 [Cucumis sativus]1.3e-4290Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQID GFE E KKWVIAGL  RSSLKPINTKSK K+G+DDG+KTPT KEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV

XP_008458799.1 PREDICTED: uncharacterized protein LOC103498100 [Cucumis melo]2.6e-4391Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQID GFEAE KKWVIAGL  RSSLKPINTKSK K+G++DGEKTPT KEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV

XP_023550994.1 cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita pepo subsp. pepo]5.0e-4288.46Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        MGFSKKSQIDGGFE EGKKWVIAGLP RSSLKPI TKS+AKDGDDDGEK    TPTAKEARIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

Query:  KLRV
        K+RV
Subjt:  KLRV

XP_038890813.1 cyclin-dependent protein kinase inhibitor SMR6 [Benincasa hispida]5.7e-4695Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQIDGGFEAEGKKWVIAGLP RSSLKPI+TKSKAKDG+DDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQN++REFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV

TrEMBL top hitse value%identityAlignment
A0A0A0KUE2 Uncharacterized protein6.3e-4390Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQID GFE E KKWVIAGL  RSSLKPINTKSK K+G+DDG+KTPT KEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV

A0A1S3C883 uncharacterized protein LOC1034981001.3e-4391Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQID GFEAE KKWVIAGL  RSSLKPINTKSK K+G++DGEKTPT KEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV

A0A5D3BY33 Uncharacterized protein1.3e-4391Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQID GFEAE KKWVIAGL  RSSLKPINTKSK K+G++DGEKTPT KEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV

A0A6J1FHD8 cyclin-dependent protein kinase inhibitor SMR67.7e-4186.54Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        MGFSKKSQIDGGFE EGKKWVIAGLP RSSLKPI TK +AKDG+DDGEK    TPTAKEARIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

Query:  KLRV
        K+RV
Subjt:  KLRV

A0A6J1JVL3 cyclin-dependent protein kinase inhibitor SMR6-like7.7e-4186.54Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        MGFSKKSQIDGG EAEGKKWVIAGLP RSSLKPI+TKS+AKDG+DD EK    TPTAKEARIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

Query:  KLRV
        K+RV
Subjt:  KLRV

SwissProt top hitse value%identityAlignment
F4IWB3 Cyclin-dependent protein kinase inhibitor SMR136.6e-0548.94Show/hide
Query:  TPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        TP AK++RIPE L CPPAP+K+R  K+   +     FF PP++E  F
Subjt:  TPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR156.6e-1347.66Show/hide
Query:  MGFSKKS--QIDGGFE--AEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGE---KTPTAKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFNPPDL
        MGFS K+  Q D  F    EGKK VI G+   S++KPI+  S A    +D +    TPTA   RIP  + CPPAP+KR+ +LK S      REFF+PPDL
Subjt:  MGFSKKS--QIDGGFE--AEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGE---KTPTAKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFNPPDL

Query:  ESVFKLR
        E+VF  R
Subjt:  ESVFKLR

Q29Q81 Cyclin-dependent protein kinase inhibitor SMR63.5e-2254.87Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAK------------DGDDDGEKTPTAKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFF
        MGFSKKSQ +GG E++GKKWVIAG+  R+SLKP+ TK +A             + +++   TPTAKE +IPE L CPPAPRKRR +LK  SN   +REFF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAK------------DGDDDGEKTPTAKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFF

Query:  NPP-DLESVFKLR
         PP DLE+VF  R
Subjt:  NPP-DLESVFKLR

Q9LVX6 Cyclin-dependent protein kinase inhibitor SMR73.1e-1040.82Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTK--SKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        MG SKKSQ+    + +GKK++ A    R+SLKP+ TK     ++ +D    TPTA+ A+ PE   CP APRKR  +    N   +  F  P D E VF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTK--SKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

Q9SAD3 Cyclin-dependent protein kinase inhibitor SMR81.5e-1244.23Show/hide
Query:  MGFSKK--SQIDGGF--EAEGKKWVIAGLPPRSSLKPINTKS----KAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDL
        MG+S K   Q+DG      +GKKWVIAG+P RS LK IN          +  D    TPTA   RIP    CP AP+KR+     S     R++F+PPDL
Subjt:  MGFSKK--SQIDGGF--EAEGKKWVIAGLPPRSSLKPINTKS----KAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDL

Query:  ESVF
        E+VF
Subjt:  ESVF

Arabidopsis top hitse value%identityAlignment
AT1G10690.1 unknown protein1.0e-1344.23Show/hide
Query:  MGFSKK--SQIDGGF--EAEGKKWVIAGLPPRSSLKPINTKS----KAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDL
        MG+S K   Q+DG      +GKKWVIAG+P RS LK IN          +  D    TPTA   RIP    CP AP+KR+     S     R++F+PPDL
Subjt:  MGFSKK--SQIDGGF--EAEGKKWVIAGLPPRSSLKPINTKS----KAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDL

Query:  ESVF
        E+VF
Subjt:  ESVF

AT1G60783.1 unknown protein4.7e-1447.66Show/hide
Query:  MGFSKKS--QIDGGFE--AEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGE---KTPTAKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFNPPDL
        MGFS K+  Q D  F    EGKK VI G+   S++KPI+  S A    +D +    TPTA   RIP  + CPPAP+KR+ +LK S      REFF+PPDL
Subjt:  MGFSKKS--QIDGGFE--AEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGE---KTPTAKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFNPPDL

Query:  ESVFKLR
        E+VF  R
Subjt:  ESVFKLR

AT3G20898.1 unknown protein4.7e-0648.94Show/hide
Query:  TPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        TP AK++RIPE L CPPAP+K+R  K+   +     FF PP++E  F
Subjt:  TPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

AT3G27630.1 unknown protein2.2e-1140.82Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTK--SKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF
        MG SKKSQ+    + +GKK++ A    R+SLKP+ TK     ++ +D    TPTA+ A+ PE   CP APRKR  +    N   +  F  P D E VF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTK--SKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF

AT5G40460.1 unknown protein2.5e-2354.87Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAK------------DGDDDGEKTPTAKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFF
        MGFSKKSQ +GG E++GKKWVIAG+  R+SLKP+ TK +A             + +++   TPTAKE +IPE L CPPAPRKRR +LK  SN   +REFF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAK------------DGDDDGEKTPTAKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFF

Query:  NPP-DLESVFKLR
         PP DLE+VF  R
Subjt:  NPP-DLESVFKLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCTCCAAAAAGTCTCAAATCGATGGCGGATTTGAAGCAGAGGGAAAAAAATGGGTAATCGCCGGGTTGCCGCCAAGGTCATCGTTGAAGCCGATTAACACAAA
ATCGAAGGCGAAAGACGGCGATGACGACGGCGAGAAGACTCCGACGGCGAAAGAAGCTAGAATACCGGAGAAACTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTC
TAAAATCAAGCTCTAATCAAAATCATATGAGGGAGTTCTTTAATCCTCCTGATTTAGAATCTGTGTTCAAGCTTCGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
CAAAGTTTCCTTTCACTCCTTTTCTTTTTTCTCATTTCCCTCCTAATTTCCCTTCCTCCTCCGTTTCTTTCTCCGAATAAACCCTCAAACGATTCCTCTGTTTTTTTTCA
TTCTCTTCTCCCTTTTCCCAACTTTTCTGGGTGTTTTTTTTTCTTCCATTTTATTGGATTTCAAATGGGATTCTCCAAAAAGTCTCAAATCGATGGCGGATTTGAAGCAG
AGGGAAAAAAATGGGTAATCGCCGGGTTGCCGCCAAGGTCATCGTTGAAGCCGATTAACACAAAATCGAAGGCGAAAGACGGCGATGACGACGGCGAGAAGACTCCGACG
GCGAAAGAAGCTAGAATACCGGAGAAACTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAAAATCATATGAGGGAGTTCTTTAATCC
TCCTGATTTAGAATCTGTGTTCAAGCTTCGAGTTTAAAAGAGCCAATTGGGTTTGTAATAGTTGAGAATTTAGGGGTTTCACTTTTTTTTTTCTTTTTTTTTTTTGGGTG
TTTGTTTAATTTTTCTCTTCTTTTTGGGGGGTTTTCTTTTTACTATTCTTATTTTTTGTGTACTTGGTTAGTTGTTAGGACTTGAGAGTAAGGTGATTATGATGTACAAA
GGATTTGAAATTTGTTATCTAATTGAGTATTATTCTAGTTTAGCTTTGTTCAAATTTTCCCATGAAACAAACAAATAAACCCAGATGAG
Protein sequenceShow/hide protein sequence
MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV