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Clc09G21230 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G21230
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:34711188..34711796
RNA-Seq ExpressionClc09G21230
SyntenyClc09G21230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011655383.1 uncharacterized protein LOC105435522 [Cucumis sativus]9.1e-5077.12Show/hide
Query:  MPALETASAGKFRYRRLRYSEEFEEAFGRSR--GGEGIRKRSRR---WFRIR-----KASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFR
        M  LETASAGKFRYRRLRYSEEFEEAFGRSR  GGEGIRKR RR   WFR+R      + SIGRRLKKLRIPSLRKLLRRK RLVNAMRGSI+KV+KRFR
Subjt:  MPALETASAGKFRYRRLRYSEEFEEAFGRSR--GGEGIRKRSRR---WFRIR-----KASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFR

Query:  DGEAYLGDLFAGNYLFLQVNPNSIKCFNKKNHHR----FPLPNFPQTYSLPSF
        DGEAYLGDLFAGNYLFLQVNP+S+KC    +HH+    F + NFPQTYSLPSF
Subjt:  DGEAYLGDLFAGNYLFLQVNPNSIKCFNKKNHHR----FPLPNFPQTYSLPSF

XP_016902323.1 PREDICTED: uncharacterized protein LOC107991631 [Cucumis melo]1.4e-4778.15Show/hide
Query:  MPALETASAGKFRYRRLRYSEEFEEAFGRSR-GGEGIRK--RSRRWF---RIRKAS---SIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRD
        M  LETASAGKFRYRRLRYSEEFEEAFGRSR GG GIRK  R+RRW+   R+RK S   SIGRRLKKLRIPSLRKL+RRK RLVNAMRGSI+KVLKRFRD
Subjt:  MPALETASAGKFRYRRLRYSEEFEEAFGRSR-GGEGIRK--RSRRWF---RIRKAS---SIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRD

Query:  GEAYLGDLFAGNYLFLQVNPNSIKCFNKKNHHR---FPLPNFPQTYSLPSF
        GEAYLGDLFAGNYLFLQVNP+S+KC   KNHH+   F + NF QTYSLP+F
Subjt:  GEAYLGDLFAGNYLFLQVNPNSIKCFNKKNHHR---FPLPNFPQTYSLPSF

XP_022990096.1 uncharacterized protein LOC111487096 [Cucurbita maxima]8.8e-4578.01Show/hide
Query:  MPALE-TASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRK----RSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAY
        MP L+ TA  GKFRYRRLRYSEEFEEAFGRSR GE  R+    RS+RWF+IR+A SIGRRLKKLR+PSLRKLLRRKSRLV AM+GSISKV+KRFR+GEAY
Subjt:  MPALE-TASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRK----RSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAY

Query:  LGDLFAGNYLFLQVNPNSIKCFNKKNHHRFPLPNFPQTYSL
        LGDLFAGNYLFLQVNP+SIKC   KNHH   LPNF  TYSL
Subjt:  LGDLFAGNYLFLQVNPNSIKCFNKKNHHRFPLPNFPQTYSL

XP_023551709.1 uncharacterized protein LOC111809563 [Cucurbita pepo subsp. pepo]1.8e-4578.72Show/hide
Query:  MPALETASA-GKFRYRRLRYSEEFEEAFGRSRGGEGIRK----RSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAY
        MP L+T +A GKFRYRRLRYSEEFEEAFGRSRGGE  R+    RS+RWFRIR+A SIGRRLKKLR+PSLRKLLRRKSRLV AMRGSI+KV+KRFR+GEAY
Subjt:  MPALETASA-GKFRYRRLRYSEEFEEAFGRSRGGEGIRK----RSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAY

Query:  LGDLFAGNYLFLQVNPNSIKCFNKKNHHRFPLPNFPQTYSL
        LGDLFAGNYLFLQVNP+SIKC   KNHH   L NF  TYSL
Subjt:  LGDLFAGNYLFLQVNPNSIKCFNKKNHHRFPLPNFPQTYSL

XP_038889218.1 uncharacterized protein LOC120079105 [Benincasa hispida]1.2e-5787.86Show/hide
Query:  MPALETASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRKRSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLF
        M  LETA A KFRYRRL YSEEFEEAFGR RGGE I KRS+RWFRIRKASSIGRRLKKLRIPSLRKLLRRKS+LVNAMRGSISK+LKRFRDGEAYLGDLF
Subjt:  MPALETASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRKRSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLF

Query:  AGNYLFLQVNPNSIKCFNKKNHHRFPLPNFPQTYSLPSFT
        AGNYLFLQVNP+S+KC   KNHHRFPL NFPQTYSLPSFT
Subjt:  AGNYLFLQVNPNSIKCFNKKNHHRFPLPNFPQTYSLPSFT

TrEMBL top hitse value%identityAlignment
A0A0A0KSD1 Uncharacterized protein4.4e-5077.12Show/hide
Query:  MPALETASAGKFRYRRLRYSEEFEEAFGRSR--GGEGIRKRSRR---WFRIR-----KASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFR
        M  LETASAGKFRYRRLRYSEEFEEAFGRSR  GGEGIRKR RR   WFR+R      + SIGRRLKKLRIPSLRKLLRRK RLVNAMRGSI+KV+KRFR
Subjt:  MPALETASAGKFRYRRLRYSEEFEEAFGRSR--GGEGIRKRSRR---WFRIR-----KASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFR

Query:  DGEAYLGDLFAGNYLFLQVNPNSIKCFNKKNHHR----FPLPNFPQTYSLPSF
        DGEAYLGDLFAGNYLFLQVNP+S+KC    +HH+    F + NFPQTYSLPSF
Subjt:  DGEAYLGDLFAGNYLFLQVNPNSIKCFNKKNHHR----FPLPNFPQTYSLPSF

A0A1S4E272 uncharacterized protein LOC1079916317.0e-4878.15Show/hide
Query:  MPALETASAGKFRYRRLRYSEEFEEAFGRSR-GGEGIRK--RSRRWF---RIRKAS---SIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRD
        M  LETASAGKFRYRRLRYSEEFEEAFGRSR GG GIRK  R+RRW+   R+RK S   SIGRRLKKLRIPSLRKL+RRK RLVNAMRGSI+KVLKRFRD
Subjt:  MPALETASAGKFRYRRLRYSEEFEEAFGRSR-GGEGIRK--RSRRWF---RIRKAS---SIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRD

Query:  GEAYLGDLFAGNYLFLQVNPNSIKCFNKKNHHR---FPLPNFPQTYSLPSF
        GEAYLGDLFAGNYLFLQVNP+S+KC   KNHH+   F + NF QTYSLP+F
Subjt:  GEAYLGDLFAGNYLFLQVNPNSIKCFNKKNHHR---FPLPNFPQTYSLPSF

A0A6J1E2Z5 uncharacterized protein LOC1114303121.2e-4477.46Show/hide
Query:  MPALE-TASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRK-----RSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEA
        MP L+ TA  GKFRYRRLRYSEEFEEAFGRSR GE  R+     RS+RWFRIR+A SIGRRLKKLR+PSLRKLLRRKSRLV AMRGSI+KV+KRFR+GEA
Subjt:  MPALE-TASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRK-----RSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEA

Query:  YLGDLFAGNYLFLQVNPNSIKCFNKKNHHRFPLPNFPQTYSL
        YLGDLFAGNYLFLQVNP+SIKC   KNHH   L NF  TYSL
Subjt:  YLGDLFAGNYLFLQVNPNSIKCFNKKNHHRFPLPNFPQTYSL

A0A6J1FMJ7 uncharacterized protein LOC1114453171.4e-4073.91Show/hide
Query:  MPALETASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRKRSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLF
        M  LE ASA KFRYRRLR+S+E E AF RSR GE   +R    FR+R+A SIGRRLKKLRIPSLRKL  RKSRLVNAM GSISKVLKRFRDGEAYLGDLF
Subjt:  MPALETASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRKRSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLF

Query:  AGNYLFLQVNPNSIKCFNKKNHHRFPLPNFPQTYSLPS
        AGNYLFLQ+NP+SIKC    NHH++PL NFP T+SLP+
Subjt:  AGNYLFLQVNPNSIKCFNKKNHHRFPLPNFPQTYSLPS

A0A6J1JM01 uncharacterized protein LOC1114870964.3e-4578.01Show/hide
Query:  MPALE-TASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRK----RSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAY
        MP L+ TA  GKFRYRRLRYSEEFEEAFGRSR GE  R+    RS+RWF+IR+A SIGRRLKKLR+PSLRKLLRRKSRLV AM+GSISKV+KRFR+GEAY
Subjt:  MPALE-TASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRK----RSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAY

Query:  LGDLFAGNYLFLQVNPNSIKCFNKKNHHRFPLPNFPQTYSL
        LGDLFAGNYLFLQVNP+SIKC   KNHH   LPNF  TYSL
Subjt:  LGDLFAGNYLFLQVNPNSIKCFNKKNHHRFPLPNFPQTYSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G14410.1 unknown protein2.0e-1038.79Show/hide
Query:  GEGIRKRSRRW-FRIRKASSIG--RRLK-KLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYLFLQVNPNSI-------KCFNKKN
        GE  R+RS  + +R ++  S+G  RR++ +++I  LR  +R+K+   N ++  I K+LKR ++ +++ GDLFAGNYLF+QVNP+S+       K F  +N
Subjt:  GEGIRKRSRRW-FRIRKASSIG--RRLK-KLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYLFLQVNPNSI-------KCFNKKN

Query:  HHRFPLPNFPQTYSLP
               NFP   SLP
Subjt:  HHRFPLPNFPQTYSLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGCCCTCGAAACCGCATCCGCAGGCAAATTCCGGTACCGGAGATTGAGATACAGTGAGGAATTTGAGGAGGCATTTGGGAGATCAAGAGGAGGAGAAGGG
ATTAGGAAGAGATCGAGGCGGTGGTTCAGAATCAGAAAGGCTTCGTCGATTGGGAGGAGGTTGAAGAAGCTGAGAATCCCTAGCTTGAGAAAGCTGTTGAGGAGG
AAATCGCGGTTGGTGAATGCTATGAGAGGCTCCATTTCGAAGGTTTTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCGGGAAATTACTTG
TTCCTTCAAGTCAATCCAAACTCCATCAAATGCTTCAACAAGAAAAATCATCACCGATTTCCTCTTCCAAATTTCCCCCAAACTTATTCCCTCCCAAGCTTTACC
TAA
mRNA sequenceShow/hide mRNA sequence
GTAGCAGCAGCAGCAGCAGCAGCAAAAGCAAAACCCCAACTTCCTGTTGCCAAACCATTTAATGCCCTAAACAATCTCTCTCTATCACTCTGTTTCTCTTCCTTT
ATAAATGCGCTCTCAATACTCTGTTTCCTTCTCAACAAACTTCCAAATCCGCCATGCCGGCCCTCGAAACCGCATCCGCAGGCAAATTCCGGTACCGGAGATTGA
GATACAGTGAGGAATTTGAGGAGGCATTTGGGAGATCAAGAGGAGGAGAAGGGATTAGGAAGAGATCGAGGCGGTGGTTCAGAATCAGAAAGGCTTCGTCGATTG
GGAGGAGGTTGAAGAAGCTGAGAATCCCTAGCTTGAGAAAGCTGTTGAGGAGGAAATCGCGGTTGGTGAATGCTATGAGAGGCTCCATTTCGAAGGTTTTGAAGA
GATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCGGGAAATTACTTGTTCCTTCAAGTCAATCCAAACTCCATCAAATGCTTCAACAAGAAAAATCATC
ACCGATTTCCTCTTCCAAATTTCCCCCAAACTTATTCCCTCCCAAGCTTTACCTAATTAGTATTTGTTTTTCCTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MPALETASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRKRSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYL
FLQVNPNSIKCFNKKNHHRFPLPNFPQTYSLPSFT