CuGenDBv2

Gene ID	Clc09G21400
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Protein translocase subunit
Genome location	ClcChr09:34844399..34850791
RNA-Seq Expression	Clc09G21400
Synteny	Clc09G21400
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004142815.1 uncharacterized protein LOC101208398 [Cucumis sativus]

2.9e-74

84.7

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Query:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE
        MGLGILRSI+RPLTRISRS P +S T FPS FT +KPGFHLPS GSVRT  PWFPIANHF HSLTETR PKRRPS KPRRKRASLRPPGPYAWV YTPG+
Subjt:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE

Query:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK
        PILPN PNEGSVKRRNEKKRIRL RAFIM+E++KRKAQ+QEA KKKL+MRVERKMAAVARERAWA RLAELQ+LEEEKKKSM+
Subjt:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK

XP_008466941.1 PREDICTED: uncharacterized protein LOC103504316 [Cucumis melo]

1.7e-74

84.15

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Query:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE
        MGLGILRSIVRPLTRISRS P +S T FPS FT +KPGFHLPS GSVRT  PWFPI NHF HSLT+TRFPKRRPS KPRR+RASL+PPGPYAWV YTPG+
Subjt:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE

Query:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK
        PILPNHPNEGSVKRRNEKKRIRL RAFIM+E+RKRKAQ+QEA +KKL+MRVERKMAAVARERAWA RLAELQ+LEEEKKKSM+
Subjt:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK

XP_022132599.1 uncharacterized protein LOC111005424 [Momordica charantia]

3.1e-76

85.79

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Query:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE
        MGLG+LRS+VRPLTR  RSRPS SLTPFP+ FTS +P FHL S GSV T+APWFPIANHF HSLT+TRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE
Subjt:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE

Query:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK
        PILPN PNEGSVKRRNEKKRIRLRRAFI+AEK+KRKAQ QEAKKKK+I RVERKMAAVARERAWA+RLAELQ+LEEE+KKSM+
Subjt:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK

XP_023002923.1 uncharacterized protein LOC111496683 [Cucurbita maxima]

2.5e-70

82.51

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Query:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE
        MGLGILRS +RPLTR   SRP  SLTP PS FTS K GF+L S G+V T+APWFPI+NHF +SLT+TR PKRRPSDKPRRKRASLRPPGPYAWV+YTPGE
Subjt:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE

Query:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK
        PI PN PNEGSVKRRNEKKRIRLRRAFI+AEK+KRKAQ+QEAKKKK+I RVERKMAAVARERAWA RLAELQ+LEEEKKKSMK
Subjt:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK

XP_038890999.1 uncharacterized protein LOC120080411 [Benincasa hispida]

1.1e-81

92.35

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Query:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE
        MGLGILRSIVRPLTRISRSRPS SLTPFPS FTS KPGFHLPSA SVR EAPWF IANHF HSLTETRFPKRRPSDKPRRKRASLRPPGPYAWV YTPGE
Subjt:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE

Query:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK
        PILPNHPNEGSVKRRNEKKRIRL RAFIMAEK+KRKAQ+QEAKKKKLIMRVERKMAAVARERAWAERLAELQ+LEE KKKSM+
Subjt:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUQ0 Uncharacterized protein

1.4e-74

84.7

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Query:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE
        MGLGILRSI+RPLTRISRS P +S T FPS FT +KPGFHLPS GSVRT  PWFPIANHF HSLTETR PKRRPS KPRRKRASLRPPGPYAWV YTPG+
Subjt:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE

Query:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK
        PILPN PNEGSVKRRNEKKRIRL RAFIM+E++KRKAQ+QEA KKKL+MRVERKMAAVARERAWA RLAELQ+LEEEKKKSM+
Subjt:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK

A0A1S3CSD0 uncharacterized protein LOC103504316

8.1e-75

84.15

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Query:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE
        MGLGILRSIVRPLTRISRS P +S T FPS FT +KPGFHLPS GSVRT  PWFPI NHF HSLT+TRFPKRRPS KPRR+RASL+PPGPYAWV YTPG+
Subjt:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE

Query:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK
        PILPNHPNEGSVKRRNEKKRIRL RAFIM+E+RKRKAQ+QEA +KKL+MRVERKMAAVARERAWA RLAELQ+LEEEKKKSM+
Subjt:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK

A0A6J1BTI2 uncharacterized protein LOC111005424

1.5e-76

85.79

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Query:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE
        MGLG+LRS+VRPLTR  RSRPS SLTPFP+ FTS +P FHL S GSV T+APWFPIANHF HSLT+TRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE
Subjt:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE

Query:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK
        PILPN PNEGSVKRRNEKKRIRLRRAFI+AEK+KRKAQ QEAKKKK+I RVERKMAAVARERAWA+RLAELQ+LEEE+KKSM+
Subjt:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK

A0A6J1HFM5 uncharacterized protein LOC111463516

8.7e-69

79.78

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Query:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE
        MGLGILRS +RPLTR   SRP  SLTP PS F S K GF+L S G+V T+APWFPI+NHF +SLT+TRFPKRRPSDKPRRKRASLRPPGPYAWV+YTPGE
Subjt:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE

Query:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK
        PI PN PNEGSVKRRNEKKRIR RRAFI+AEK+KR+AQ+QEA KKK+I RVERKMAAVAR+RAWA+RLAELQRLE+EKKKSM+
Subjt:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK

A0A6J1KV00 uncharacterized protein LOC111496683

1.2e-70

82.51

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Query:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE
        MGLGILRS +RPLTR   SRP  SLTP PS FTS K GF+L S G+V T+APWFPI+NHF +SLT+TR PKRRPSDKPRRKRASLRPPGPYAWV+YTPGE
Subjt:  MGLGILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGE

Query:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK
        PI PN PNEGSVKRRNEKKRIRLRRAFI+AEK+KRKAQ+QEAKKKK+I RVERKMAAVARERAWA RLAELQ+LEEEKKKSMK
Subjt:  PILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G51010.1 unknown protein

2.1e-51

62.9

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Query:  MGLGILRSIVRPLTR--ISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSV-RTEAPWFPIANHFLH-SLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQY
        MG G +RSI+RPL+R  +SR+  + S  PF +   +AKP       GS+     PW P+ANHF   SLT+TR PKRRP   P+RKR+ L+PPGPYA+VQY
Subjt:  MGLGILRSIVRPLTR--ISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSV-RTEAPWFPIANHFLH-SLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQY

Query:  TPGEPILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSM
        TPG+PI  N+PNEGSVKRRN KKRI  RRAFI++EK+KR+A +QEAK+KK I +VERKMAAVAR+RAWAERL ELQ+LEEEKKKSM
Subjt:  TPGEPILPNHPNEGSVKRRNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSM

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGATGCGGCTCACTTTGTATTTGATGCAAACAATGTGATCTTATATCGTTCATGTAGAGACATGAGAGTCGGGGTCTTGAACAAGGGACCGAGAGGGACTCGGTTTGT
TGGTTGGACCACAAACAAATTGTTCATTAGAGAATTAGTGAGACTTAAAGAACAAGATGTAATTACAAGGGTAAAATGCTACGGAACCCCCGCCCCGCCGCACGCTGGAC
TCTCAGCCTCCCGACGAACTCGTCTCCGCTACCTCCATTTCACATTCCCTCCCTCCCAGCAATCAGAGTTACTTGTCTCTGCCATCTACGCCGTTGAGATGGGGCTTGGA
ATCCTAAGATCCATTGTTCGACCCCTAACGAGGATCTCGAGATCACGTCCCTCCAATTCCCTAACACCATTTCCATCACCTTTCACTTCCGCTAAACCAGGTTTTCATCT
TCCTTCTGCTGGTTCAGTCAGAACCGAAGCTCCTTGGTTCCCAATTGCGAACCATTTCCTCCACAGTTTGACCGAGACTCGGTTTCCGAAGAGACGGCCCAGCGATAAAC
CTCGTCGCAAAAGGGCGAGTTTGAGACCCCCTGGACCATACGCTTGGGTTCAATATACCCCTGGCGAACCAATTCTTCCTAATCACCCGAACGAAGGAAGCGTGAAAAGA
AGAAATGAGAAGAAACGGATTAGGTTGCGACGTGCTTTTATTATGGCTGAAAAAAGGAAACGGAAAGCTCAGATTCAAGAGGCAAAGAAGAAGAAACTTATCATGAGGGT
GGAACGAAAAATGGCTGCAGTAGCAAGGGAAAGAGCATGGGCTGAAAGATTAGCCGAACTTCAACGGCTTGAAGAAGAGAAGAAAAAATCCATGAAATAG

mRNA sequence

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Protein sequence

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MDAAHFVFDANNVILYRSCRDMRVGVLNKGPRGTRFVGWTTNKLFIRELVRLKEQDVITRVKCYGTPAPPHAGLSASRRTRLRYLHFTFPPSQQSELLVSAIYAVEMGLG
ILRSIVRPLTRISRSRPSNSLTPFPSPFTSAKPGFHLPSAGSVRTEAPWFPIANHFLHSLTETRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGEPILPNHPNEGSVKR
RNEKKRIRLRRAFIMAEKRKRKAQIQEAKKKKLIMRVERKMAAVARERAWAERLAELQRLEEEKKKSMK

Clc09G21400 (gene) of Watermelon (cordophanus) v2 genome