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Clc09G21525 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G21525
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionActin-11
Genome locationClcChr09:34960909..34961809
RNA-Seq ExpressionClc09G21525
SyntenyClc09G21525
Gene Ontology termsGO:0034551 - mitochondrial respiratory chain complex III assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005856 - cytoskeleton (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR027858 - Protein BRAWNIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037665.1 putative transmembrane protein [Cucumis melo var. makuwa]2.7e-1493.18Show/hide
Query:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
        MTQKFGGGLRPTGTPSVGWSFVVV+SSLLAGASIVH+IYKPNL+
Subjt:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
KAG6602373.1 hypothetical protein SDJN03_07606, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1288.64Show/hide
Query:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
        M QKFGG L PTGTPSVGWSFVVVISSLLAGAS+VHNIYKPNL+
Subjt:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
KAG7016236.1 hypothetical protein SDJN02_21342, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-1490.91Show/hide
Query:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
        M +KFGGGLRPTGTPSVGWSFVVV+SSLLAGASIVHNIYKPNL+
Subjt:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
KGN51309.1 hypothetical protein Csa_009362 [Cucumis sativus]1.6e-1495.45Show/hide
Query:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
        MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNI+KPNL+
Subjt:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
XP_023514673.1 uncharacterized protein LOC111778900 [Cucurbita pepo subsp. pepo]1.5e-1288.64Show/hide
Query:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
        M QKFGG L PTGTPSVGWSFVVVISSLLAGAS+VHNIYKPNL+
Subjt:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
TrEMBL top hitse value%identityAlignment
A0A0A0KQX5 Uncharacterized protein7.5e-1595.45Show/hide
Query:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
        MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNI+KPNL+
Subjt:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
A0A151TD64 Actin-112.5e-1075Show/hide
Query:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
        M +KFGGG +PTGTPS+ WS VVV+ SLLAGAS+VHNIYKPNL+
Subjt:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
A0A2G5C6T2 Uncharacterized protein1.9e-1077.27Show/hide
Query:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
        M QKFGGG RPTGTPS+GWS VVVI SLL GAS+VHNI+KP+L+
Subjt:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
A0A5A7T878 Putative transmembrane protein1.3e-1493.18Show/hide
Query:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
        MTQKFGGGLRPTGTPSVGWSFVVV+SSLLAGASIVH+IYKPNL+
Subjt:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
A0A6A4PT41 Uncharacterized protein3.9e-1177.27Show/hide
Query:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
        M +KFGGG +PTGTPS+GWS VVV+ SLLAGAS+VHNIYKPNL+
Subjt:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G26055.1 unknown protein1.3e-1170.45Show/hide
Query:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
        M  KF GG +PTGTPS+ WS VVV++SLLAGAS+VHNIYKP+L+
Subjt:  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
AT5G57080.1 unknown protein1.8e-0870.27Show/hide
Query:  GLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS
        G  PTGTPS+  S +VV++SLLAGAS+VHNIYKP+LS
Subjt:  GLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCAGAAATTCGGTGGTGGGTTGCGCCCTACAGGAACTCCCTCAGTGGGTTGGTCCTTCGTCGTCGTCATCTCCTCGCTTCTCGCCGGCGCCTCCATTGTCCACAA
CATCTACAAACCAAATCTTTCGTATTGCTTCATCCGTTTCTCTTGTTTCACTAAAGAGTCCTATATTCAGAGTGGTCTTCTAACTTCTATCCTTTTTAATGTCTTTGTAG
ACCTTGCCTCCGGTGGATAA
mRNA sequenceShow/hide mRNA sequence
AATTAAGGAAACCTTATTTAGCTTAATGTAATTGGAGTCTCTGAAGGGAAATTGAAATCTTGGTGGTGGGTGTTGAGCTGAATCATGACTCAGAAATTCGGTGGTGGGTT
GCGCCCTACAGGAACTCCCTCAGTGGGTTGGTCCTTCGTCGTCGTCATCTCCTCGCTTCTCGCCGGCGCCTCCATTGTCCACAACATCTACAAACCAAATCTTTCGTATT
GCTTCATCCGTTTCTCTTGTTTCACTAAAGAGTCCTATATTCAGAGTGGTCTTCTAACTTCTATCCTTTTTAATGTCTTTGTAGACCTTGCCTCCGGTGGATAA
Protein sequenceShow/hide protein sequence
MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIYKPNLSYCFIRFSCFTKESYIQSGLLTSILFNVFVDLASGG