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Clc09G21540 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G21540
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:34965520..34967172
RNA-Seq ExpressionClc09G21540
SyntenyClc09G21540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578701.1 hypothetical protein SDJN03_23149, partial [Cucurbita argyrosperma subsp. sororia]5.5e-1362.5Show/hide
Query:  VEFKTLIPSTCWTVGIIKEKRECNSERKGETKVKEVSSNQLDEERRQNRGGISKNDTNNGLDEDLKDSPKLVPFSA-IPT
        +E +T      W+    KEK + NSER+GETKVKEVS NQLD+E  QNRGGI KNDTN+GLDEDL+DS  LV FSA +PT
Subjt:  VEFKTLIPSTCWTVGIIKEKRECNSERKGETKVKEVSSNQLDEERRQNRGGISKNDTNNGLDEDLKDSPKLVPFSA-IPT
KAG6578703.1 hypothetical protein SDJN03_23151, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1069.49Show/hide
Query:  IKEKRECNSERKGETKVKEVSSNQLDEERRQNRGGISKNDTNNGLDEDLKDSPKLVPFS
        +KEK + NSER+GETKV+EVS NQLD+E  QNRGGI KNDT +GLDEDL+DS  LV  S
Subjt:  IKEKRECNSERKGETKVKEVSSNQLDEERRQNRGGISKNDTNNGLDEDLKDSPKLVPFS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACTCGGAGCAGACAAATGTGCGATGGTATACTCGAATCGAACGAAAAGAGACTAAACGACGAACGACAGAAGGTGGGTTCAAAGATTTTGTTGAATTCAAGAC
CCTGATCCCTTCAACCTGCTGGACTGTGGGCATAATCAAAGAGAAAAGAGAATGCAATTCAGAACGAAAAGGCGAAACGAAAGTCAAAGAAGTTTCATCCAATCAGCTCG
ACGAAGAGAGACGCCAGAACCGTGGTGGGATCTCCAAGAACGATACTAACAATGGTCTTGATGAAGACCTTAAGGATTCTCCAAAACTTGTTCCCTTTTCCGCCATCCCC
ACGCCCTCGTGCTTGAAGTGCTTTCAGATTCACCTTCTGAAGAGCCAACTGTTGGTCCTGGTTGGCATTATCGGCATTGATCCAGTCTCCTCCGCTCTTGTACCATTCTT
CTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACTCGGAGCAGACAAATGTGCGATGGTATACTCGAATCGAACGAAAAGAGACTAAACGACGAACGACAGAAGGTGGGTTCAAAGATTTTGTTGAATTCAAGAC
CCTGATCCCTTCAACCTGCTGGACTGTGGGCATAATCAAAGAGAAAAGAGAATGCAATTCAGAACGAAAAGGCGAAACGAAAGTCAAAGAAGTTTCATCCAATCAGCTCG
ACGAAGAGAGACGCCAGAACCGTGGTGGGATCTCCAAGAACGATACTAACAATGGTCTTGATGAAGACCTTAAGGATTCTCCAAAACTTGTTCCCTTTTCCGCCATCCCC
ACGCCCTCGTGCTTGAAGTGCTTTCAGATTCACCTTCTGAAGAGCCAACTGTTGGTCCTGGTTGGCATTATCGGCATTGATCCAGTCTCCTCCGCTCTTGTACCATTCTT
CTAA
Protein sequenceShow/hide protein sequence
MADSEQTNVRWYTRIERKETKRRTTEGGFKDFVEFKTLIPSTCWTVGIIKEKRECNSERKGETKVKEVSSNQLDEERRQNRGGISKNDTNNGLDEDLKDSPKLVPFSAIP
TPSCLKCFQIHLLKSQLLVLVGIIGIDPVSSALVPFF