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Clc09G21560 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G21560
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:34972496..34976063
RNA-Seq ExpressionClc09G21560
SyntenyClc09G21560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578700.1 hypothetical protein SDJN03_23148, partial [Cucurbita argyrosperma subsp. sororia]8.0e-1236.97Show/hide
Query:  MILPALRYAGPIIAAVTAS----DAFLLAPYALP----------IFNLVVPVEVSTAWVEIQVVFPVLLAFVFRQQGFMKIEIAPFASVSRPKAYFLAAI
        M++ A+R   P I +V+ S    +A +LAPYALP          +FNLV   EVS AWV++                                       
Subjt:  MILPALRYAGPIIAAVTAS----DAFLLAPYALP----------IFNLVVPVEVSTAWVEIQVVFPVLLAFVFRQQGFMKIEIAPFASVSRPKAYFLAAI

Query:  ADVRFQVLLQLQFVTVEHEAIDGSSASITLYSAFLMAGFWWVSKEFKGGTRKEFMRIWCIMCNHI
                 Q +F+ VEHEAIDG SAS+  + A L+A FWWVS+E KGGTRKEFM I CI+C +I
Subjt:  ADVRFQVLLQLQFVTVEHEAIDGSSASITLYSAFLMAGFWWVSKEFKGGTRKEFMRIWCIMCNHI
XP_023550074.1 uncharacterized protein LOC111808373 isoform X1 [Cucurbita pepo subsp. pepo]4.5e-3142.04Show/hide
Query:  MILPALRYAGPIIAAVTASDAFLLAPYALP----------IFNLVVPVEVSTAWVEIQVVFPVLLAFVFRQQGFMKIEIAPFASVSRPKAYFLAAIADVR
        M++ A+R  GP IA+     A  LAP+ALP          +FNLV   EVS AWVE+QV+                                        
Subjt:  MILPALRYAGPIIAAVTASDAFLLAPYALP----------IFNLVVPVEVSTAWVEIQVVFPVLLAFVFRQQGFMKIEIAPFASVSRPKAYFLAAIADVR

Query:  FQVLLQLQFVTVEHEAIDGSSASITLYSAFLMAGFWWVSKEFKGGTRKEFMRIWCIMCNHIGFVKIKIAFFASVSRPEACFLAATTIIRFVVLLQLQFMH
                F+ VEHEAIDG SAS+  Y   L+A FWWVS+E KGG RKEFM I CI+C H GFV+IKIAF ASVSR EACFLAA   IRF++LLQLQFMH
Subjt:  FQVLLQLQFVTVEHEAIDGSSASITLYSAFLMAGFWWVSKEFKGGTRKEFMRIWCIMCNHIGFVKIKIAFFASVSRPEACFLAATTIIRFVVLLQLQFMH

Query:  GVLGLRKVSIAISLCLSSKEEISREYGRNKSG----DIEKGKMEC
         V  + +        L SKE+     G  K      D+   +MEC
Subjt:  GVLGLRKVSIAISLCLSSKEEISREYGRNKSG----DIEKGKMEC
XP_023550075.1 uncharacterized protein LOC111808373 isoform X2 [Cucurbita pepo subsp. pepo]4.5e-3142.04Show/hide
Query:  MILPALRYAGPIIAAVTASDAFLLAPYALP----------IFNLVVPVEVSTAWVEIQVVFPVLLAFVFRQQGFMKIEIAPFASVSRPKAYFLAAIADVR
        M++ A+R  GP IA+     A  LAP+ALP          +FNLV   EVS AWVE+QV+                                        
Subjt:  MILPALRYAGPIIAAVTASDAFLLAPYALP----------IFNLVVPVEVSTAWVEIQVVFPVLLAFVFRQQGFMKIEIAPFASVSRPKAYFLAAIADVR

Query:  FQVLLQLQFVTVEHEAIDGSSASITLYSAFLMAGFWWVSKEFKGGTRKEFMRIWCIMCNHIGFVKIKIAFFASVSRPEACFLAATTIIRFVVLLQLQFMH
                F+ VEHEAIDG SAS+  Y   L+A FWWVS+E KGG RKEFM I CI+C H GFV+IKIAF ASVSR EACFLAA   IRF++LLQLQFMH
Subjt:  FQVLLQLQFVTVEHEAIDGSSASITLYSAFLMAGFWWVSKEFKGGTRKEFMRIWCIMCNHIGFVKIKIAFFASVSRPEACFLAATTIIRFVVLLQLQFMH

Query:  GVLGLRKVSIAISLCLSSKEEISREYGRNKSG----DIEKGKMEC
         V  + +        L SKE+     G  K      D+   +MEC
Subjt:  GVLGLRKVSIAISLCLSSKEEISREYGRNKSG----DIEKGKMEC
TrEMBL top hitse value%identityAlignment
A0A0A0KNV7 Uncharacterized protein4.3e-1136.36Show/hide
Query:  MILPALRYAGPIIAAVTASDAFLLAPYALP----------IFNLVVPVEVSTAWVEIQVVFPVLLAFVFRQQGFMKIEIAPFASVSRPKAYFLAAIADVR
        M+LPALRY GP IA   A D  LLAP+ALP          +FNLV+PVEVSTA VEIQV+                                        
Subjt:  MILPALRYAGPIIAAVTASDAFLLAPYALP----------IFNLVVPVEVSTAWVEIQVVFPVLLAFVFRQQGFMKIEIAPFASVSRPKAYFLAAIADVR

Query:  FQVLLQLQFVTVEHEAIDGSSASITLYSAFLMAGFWWVSKEFKGGTRKEFMRIW
                F+ V H+AID   A +    AF++AG WW  +E +GGT ++FM+ W
Subjt:  FQVLLQLQFVTVEHEAIDGSSASITLYSAFLMAGFWWVSKEFKGGTRKEFMRIW
A0A0A0KU92 Uncharacterized protein1.2e-0833.77Show/hide
Query:  MILPALRYAGPIIAAVTASDAFLLAPYALP----------IFNLVVPVEVSTAWVEIQVVFPVLLAFVFRQQGFMKIEIAPFASVSRPKAYFLAAIADVR
        M+LPALRY GP I      D  LLAP+ALP          +FN V+PV+VSTA VEIQ                                          
Subjt:  MILPALRYAGPIIAAVTASDAFLLAPYALP----------IFNLVVPVEVSTAWVEIQVVFPVLLAFVFRQQGFMKIEIAPFASVSRPKAYFLAAIADVR

Query:  FQVLLQLQFVTVEHEAIDGSSASITLYSAFLMAGFWWVSKEFKGGTRKEFMRIW
            L   F+ V H+AID   A +    A + AG WW  KE +GG  +EFM+ W
Subjt:  FQVLLQLQFVTVEHEAIDGSSASITLYSAFLMAGFWWVSKEFKGGTRKEFMRIW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACTCCCCGCACTTAGATACGCAGGACCAATCATTGCCGCGGTCACTGCCTCTGATGCTTTTCTTTTGGCACCATATGCACTTCCCATCTTCAATTTGGTTGTTCC
TGTTGAGGTTTCCACAGCATGGGTGGAGATACAAGTTGTCTTTCCTGTTCTGCTTGCGTTTGTCTTTCGGCAGCAGGGCTTTATGAAGATCGAAATCGCACCTTTCGCAT
CTGTATCGAGGCCCAAAGCCTATTTCCTTGCAGCCATCGCAGATGTAAGGTTTCAAGTACTTCTTCAGCTCCAGTTTGTCACAGTGGAACATGAAGCCATTGATGGTTCT
AGTGCAAGCATCACACTTTATTCTGCATTCCTCATGGCTGGATTCTGGTGGGTTTCTAAGGAATTCAAAGGTGGAACCCGGAAAGAATTCATGAGAATTTGGTGCATCAT
GTGCAACCATATAGGCTTTGTGAAGATCAAAATTGCATTCTTCGCATCGGTATCGAGGCCCGAAGCCTGTTTCCTTGCAGCCACCACAATAATAAGGTTTGTGGTACTCC
TCCAGCTCCAATTCATGCATGGGGTGCTTGGATTGCGCAAGGTCTCCATTGCCATTTCTCTGTGTTTGTCTTCAAAAGAAGAGATCTCTCGTGAATATGGAAGAAATAAG
AGTGGAGATATTGAGAAAGGCAAAATGGAATGTTTTCTCTCTCGTCAGCGACCTCCTCCTCGTCCTGCCTTCCAGTCTGCCATGGGAGCACACAATCAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATACTCCCCGCACTTAGATACGCAGGACCAATCATTGCCGCGGTCACTGCCTCTGATGCTTTTCTTTTGGCACCATATGCACTTCCCATCTTCAATTTGGTTGTTCC
TGTTGAGGTTTCCACAGCATGGGTGGAGATACAAGTTGTCTTTCCTGTTCTGCTTGCGTTTGTCTTTCGGCAGCAGGGCTTTATGAAGATCGAAATCGCACCTTTCGCAT
CTGTATCGAGGCCCAAAGCCTATTTCCTTGCAGCCATCGCAGATGTAAGGTTTCAAGTACTTCTTCAGCTCCAGTTTGTCACAGTGGAACATGAAGCCATTGATGGTTCT
AGTGCAAGCATCACACTTTATTCTGCATTCCTCATGGCTGGATTCTGGTGGGTTTCTAAGGAATTCAAAGGTGGAACCCGGAAAGAATTCATGAGAATTTGGTGCATCAT
GTGCAACCATATAGGCTTTGTGAAGATCAAAATTGCATTCTTCGCATCGGTATCGAGGCCCGAAGCCTGTTTCCTTGCAGCCACCACAATAATAAGGTTTGTGGTACTCC
TCCAGCTCCAATTCATGCATGGGGTGCTTGGATTGCGCAAGGTCTCCATTGCCATTTCTCTGTGTTTGTCTTCAAAAGAAGAGATCTCTCGTGAATATGGAAGAAATAAG
AGTGGAGATATTGAGAAAGGCAAAATGGAATGTTTTCTCTCTCGTCAGCGACCTCCTCCTCGTCCTGCCTTCCAGTCTGCCATGGGAGCACACAATCAAAATTGAAACAT
AGAATTTCACACTCGTGTACACACTGTACACTCTACTTTTGGAATGAAAGAAAAAAGAGAATATAATTCAGAAAGAAAGAAATGGCGAAACAAAACTCAAAAAGGTTTCA
TCCAATCAGCTCCTCGAAGAGAGATGCTAGAACCGTGGTGGGATCTCCTAGAACGATGCTAACAATGGTCTTGATGAAGACC
Protein sequenceShow/hide protein sequence
MILPALRYAGPIIAAVTASDAFLLAPYALPIFNLVVPVEVSTAWVEIQVVFPVLLAFVFRQQGFMKIEIAPFASVSRPKAYFLAAIADVRFQVLLQLQFVTVEHEAIDGS
SASITLYSAFLMAGFWWVSKEFKGGTRKEFMRIWCIMCNHIGFVKIKIAFFASVSRPEACFLAATTIIRFVVLLQLQFMHGVLGLRKVSIAISLCLSSKEEISREYGRNK
SGDIEKGKMECFLSRQRPPPRPAFQSAMGAHNQN