; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G21900 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G21900
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionphotosynthetic NDH subunit of lumenal location 1, chloroplastic
Genome locationClcChr09:35279897..35282502
RNA-Seq ExpressionClc09G21900
SyntenyClc09G21900
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002683 - PsbP, C-terminal
IPR016123 - Mog1/PsbP, alpha/beta/alpha sandwich


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022953447.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita moschata]4.2e-12493.22Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPLLLGVGALA SL AASPLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_022990449.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita maxima]4.7e-12392.37Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPLLLGVGALATSL AA PLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_023534746.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]2.7e-12392.37Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPLLLGVGALATSL AA+PLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_038889544.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Benincasa hispida]8.8e-13098.31Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSCFSWVPTTASNWKLRLLPFNEPSTAT SFSSCSTINCSTE+TSREEGHCNRRPLLLGVGALATSLLAASPLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_038889545.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Benincasa hispida]1.1e-12797.88Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSCFSWVPTTASNWKLRLLPFNEPSTAT SFSSCSTINCSTE+TSREEGHCNRRPLLLGVGALATSLLAASPLFA E+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

TrEMBL top hitse value%identityAlignment
A0A0A0KNR7 PsbP domain-containing protein4.2e-12294.07Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVP TASNWKL+LLPFNEPSTAT SFSS STINCS ER SR+EG  NRRPLLLGVGALATSLL ASPLFAEEIPKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDG+ YYTFEYKLSSRAFSRTSFATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A1S3CKZ3 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X11.5e-12293.22Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPTTASNWKL+LLPFNEP+TAT SFSS STINCS ERTSR+EG  NRRPLLLGVGALATSLL ASPLFA+E+PKNYRAFVD TDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDG+NYYTFEYKLSSRAFSRT+FATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1GN22 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X22.5e-12292.8Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPLLLGVGALA SL AASPLFA E+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1GN93 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X12.0e-12493.22Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPLLLGVGALA SL AASPLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1JS28 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X12.3e-12392.37Show/hide
Query:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPLLLGVGALATSL AA PLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

SwissProt top hitse value%identityAlignment
O23403 PsbP domain-containing protein 1, chloroplastic9.1e-0522.32Show/hide
Query:  INCSTERTSREEGHCNRRPLLLGVGALATSLLAAS---PLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD
        INC T+  +++     RR  ++ +G L + L+ +    P      P  +R ++D+ DGYS+ YP +W +      D  F+D  +  +N+ V+F      +
Subjt:  INCSTERTSREEGHCNRRPLLLGVGALATSLLAAS---PLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD

Query:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------FSRTSFATIAIANGRYYTLV
           + + G  +EV   +++         R     Q   +        DG+ YY  E  + S A                 ++R   A + + N R Y++ 
Subjt:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------FSRTSFATIAIANGRYYTLV

Query:  VGANDRRWRRYRDMLKVVADSFRV
        +   ++ +      L+ V DSFRV
Subjt:  VGANDRRWRRYRDMLKVVADSFRV

O80634 Photosynthetic NDH subunit of lumenal location 1, chloroplastic3.3e-7158.47Show/hide
Query:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        ++S  C  + PT +   K  +L  N    A C  SS    + S     +  G +  RR  L+GVG L  + + A+ L AEEIPK+Y  FVD  DGYSYYY
Subjt:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKER  DG+NYYTFEY L +  ++ TSFAT+A+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
         N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

P82538 PsbP-like protein 1, chloroplastic8.5e-3539.06Show/hide
Query:  STERTSREEGHCNRRPLL-LGVGALATSLLAASPL-FAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE
        S+  +S  +  C RR ++  GV A   SLL+ +PL FA E  K + A  D+ D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E 
Subjt:  STERTSREEGHCNRRPLL-LGVGALATSLLAASPL-FAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE

Query:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV
        GP  ++   L+K   A PNQK T+ D  E  +DG+ YY FE+ + +R ++R +  TI + NG +YTL  GAN+RRW + +D L  V DSF++
Subjt:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV

Arabidopsis top hitse value%identityAlignment
AT2G39470.1 PsbP-like protein 22.3e-7258.47Show/hide
Query:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY
        ++S  C  + PT +   K  +L  N    A C  SS    + S     +  G +  RR  L+GVG L  + + A+ L AEEIPK+Y  FVD  DGYSYYY
Subjt:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKER  DG+NYYTFEY L +  ++ TSFAT+A+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
         N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

AT2G39470.2 PsbP-like protein 25.8e-7157.56Show/hide
Query:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSY
        ++S  C  + PT +   ++ L P   PS   C         C     + ++G  N   RR  L+GVG L  + + A+ L AEEIPK+Y  FVD  DGYSY
Subjt:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSY

Query:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATI
        YYPSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKER  DG+NYYTFEY L +  ++ TSFAT+
Subjt:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATI

Query:  AIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        A+ N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  AIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

AT2G39470.3 PsbP-like protein 23.2e-4556.98Show/hide
Query:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSY
        ++S  C  + PT +   ++ L P   PS   C         C     + ++G  N   RR  L+GVG L  + + A+ L AEEIPK+Y  FVD  DGYSY
Subjt:  AVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSY

Query:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKE
        YYPSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKE
Subjt:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKE

AT3G55330.1 PsbP-like protein 16.0e-3639.06Show/hide
Query:  STERTSREEGHCNRRPLL-LGVGALATSLLAASPL-FAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE
        S+  +S  +  C RR ++  GV A   SLL+ +PL FA E  K + A  D+ D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E 
Subjt:  STERTSREEGHCNRRPLL-LGVGALATSLLAASPL-FAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE

Query:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV
        GP  ++   L+K   A PNQK T+ D  E  +DG+ YY FE+ + +R ++R +  TI + NG +YTL  GAN+RRW + +D L  V DSF++
Subjt:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV

AT4G15510.1 Photosystem II reaction center PsbP family protein6.5e-0622.32Show/hide
Query:  INCSTERTSREEGHCNRRPLLLGVGALATSLLAAS---PLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD
        INC T+  +++     RR  ++ +G L + L+ +    P      P  +R ++D+ DGYS+ YP +W +      D  F+D  +  +N+ V+F      +
Subjt:  INCSTERTSREEGHCNRRPLLLGVGALATSLLAAS---PLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD

Query:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------FSRTSFATIAIANGRYYTLV
           + + G  +EV   +++         R     Q   +        DG+ YY  E  + S A                 ++R   A + + N R Y++ 
Subjt:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------FSRTSFATIAIANGRYYTLV

Query:  VGANDRRWRRYRDMLKVVADSFRV
        +   ++ +      L+ V DSFRV
Subjt:  VGANDRRWRRYRDMLKVVADSFRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTTCAACCTCTTGCTTCAGTTGGGTTCCCACCACCGCCTCCAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCCATCAACAGCTACTTGCTCATTTTCTTC
CTGTAGTACCATCAATTGCTCAACTGAGAGAACTTCTCGTGAGGAAGGCCATTGCAATAGAAGGCCGCTTCTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTCGCCG
CAAGTCCCCTCTTTGCTGAAGAAATCCCGAAAAATTATCGAGCATTCGTAGACTCTACAGATGGGTATTCCTATTACTACCCCTCTGATTGGAGGGAATTTGATTTTAGA
GCCCATGATTCCGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACGGAGAAAAAGGATATCCATGAAGAAGGTCCATTAGATGAGGT
TGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGCTACCATATATGACATGAAGGAGCGAACGATTGATGGGAGAAATTATTACACCTTTGAGTATA
AACTTAGTTCTAGAGCATTCTCCCGCACCTCCTTTGCAACCATAGCCATTGCAAACGGTAGGTACTATACTTTGGTAGTTGGGGCAAATGACAGAAGGTGGAGAAGGTAT
CGCGACATGCTTAAAGTGGTTGCTGATTCATTCAGGGTGTTGGATATATGA
mRNA sequenceShow/hide mRNA sequence
GAGTCATCAATCATAAACACGCTTGAAAAAGGTCATCCGTACAAAAATTTGGGATACAATACCTATTTATCTAAAAAGAAATTCTGAAAAGGAAGAAAGAAAGAAACAAG
AGAAGAAAGAGTGTTGAATATGACCACAAAAACCCAACCCGATTAGATTGAGCATTCTAAGCTTCCATTTTCCAATTTTTCATTCTATGAGAGCTTCTCTGGATCAGATA
TGGCAGTTTCAACCTCTTGCTTCAGTTGGGTTCCCACCACCGCCTCCAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCCATCAACAGCTACTTGCTCATTTTCTTCC
TGTAGTACCATCAATTGCTCAACTGAGAGAACTTCTCGTGAGGAAGGCCATTGCAATAGAAGGCCGCTTCTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTCGCCGC
AAGTCCCCTCTTTGCTGAAGAAATCCCGAAAAATTATCGAGCATTCGTAGACTCTACAGATGGGTATTCCTATTACTACCCCTCTGATTGGAGGGAATTTGATTTTAGAG
CCCATGATTCCGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACGGAGAAAAAGGATATCCATGAAGAAGGTCCATTAGATGAGGTT
GTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGCTACCATATATGACATGAAGGAGCGAACGATTGATGGGAGAAATTATTACACCTTTGAGTATAA
ACTTAGTTCTAGAGCATTCTCCCGCACCTCCTTTGCAACCATAGCCATTGCAAACGGTAGGTACTATACTTTGGTAGTTGGGGCAAATGACAGAAGGTGGAGAAGGTATC
GCGACATGCTTAAAGTGGTTGCTGATTCATTCAGGGTGTTGGATATATGAGCTGTTACTGAAGGGTGTGAATCTCACTTAGTTTCTCTATTTATAATTTTCCCCTCTTCA
TTTAATATGTAGCACTATTGGAAATTGATGTATATAGCTGTTGTATACCAATCTCCTTCTCCTTTGTAAGATATATTTATATTATATATTTATTATAAAGAGCTAAAAAT
CACCCTTCTCTTTTACTTCCCATTTGTCCACCGGGGTGATGCAGGTTTATTAAACAAAAACAACAAAAT
Protein sequenceShow/hide protein sequence
MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLAASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFR
AHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRY
RDMLKVVADSFRVLDI