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Clc09G21950 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G21950
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPlant protein 1589 of unknown function
Genome locationClcChr09:35354669..35358549
RNA-Seq ExpressionClc09G21950
SyntenyClc09G21950
Gene Ontology termsGO:0032502 - developmental process (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006476 - Conserved hypothetical protein CHP01589, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150990.1 uncharacterized protein LOC101208991 isoform X1 [Cucumis sativus]1.5e-3696.43Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN
        VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVW+ELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMI DS KGDPKN
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN

XP_008463517.1 PREDICTED: uncharacterized protein LOC103501658 [Cucumis melo]2.6e-3696.43Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN
        VQHLIEKCLIFHMTKEECM+ALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMI DS KGDPKN
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN

XP_022133966.1 uncharacterized protein LOC111006373 isoform X1 [Momordica charantia]8.5e-3594.05Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN
        VQHLIEKCLIFHMTKEECMDALSKHA+IKPIITSTVWSELEKENKEFFEAYAQS +N DRMSEEETSQMIQKMI DSSKGDPKN
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN

XP_022133967.1 uncharacterized protein LOC111006373 isoform X2 [Momordica charantia]8.5e-3594.05Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN
        VQHLIEKCLIFHMTKEECMDALSKHA+IKPIITSTVWSELEKENKEFFEAYAQS +N DRMSEEETSQMIQKMI DSSKGDPKN
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN

XP_038890611.1 uncharacterized protein LOC120080119 [Benincasa hispida]1.2e-3696.43Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN
        VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQ+HNNSDRMSEE+TSQMIQKMI DSSKGDPKN
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN

TrEMBL top hitse value%identityAlignment
A0A0A0KU49 Uncharacterized protein7.5e-3796.43Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN
        VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVW+ELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMI DS KGDPKN
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN

A0A1S3CJG8 uncharacterized protein LOC1035016581.3e-3696.43Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN
        VQHLIEKCLIFHMTKEECM+ALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMI DS KGDPKN
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN

A0A6J1BWN4 uncharacterized protein LOC111006373 isoform X14.1e-3594.05Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN
        VQHLIEKCLIFHMTKEECMDALSKHA+IKPIITSTVWSELEKENKEFFEAYAQS +N DRMSEEETSQMIQKMI DSSKGDPKN
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN

A0A6J1BY89 uncharacterized protein LOC111006373 isoform X24.1e-3594.05Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN
        VQHLIEKCLIFHMTKEECMDALSKHA+IKPIITSTVWSELEKENKEFFEAYAQS +N DRMSEEETSQMIQKMI DSSKGDPKN
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN

A0A6J1JTG8 uncharacterized protein LOC1114873431.2e-3184.52Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN
        VQHLIEKCLIF MTKEECMDALSKHA+I P+ITSTVW+ELEKENKEFFEAYA++ +N D MSEEET+QMIQ+MILDSSKGDPKN
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10657.2 Plant protein 1589 of unknown function1.3e-1254.9Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAY
        VQH+IE+C++  MT++EC+ AL  HA I P++T TVW  L++ENK+FFE Y
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAY

AT1G10657.3 Plant protein 1589 of unknown function6.3e-1244.93Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQM
        VQH+IE+C++  MT++EC+ AL  HA I P++T TVW  L++ENK+FFE Y    +    +S+    QM
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQM

AT3G28990.1 Plant protein 1589 of unknown function3.3e-2164.86Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMI
        VQH+IE CL F+M+KEECM+ALS++A+I PIITSTVW EL KENK+FFE Y Q     + MSEEET+Q+IQ +I
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMI

AT3G55240.1 Plant protein 1589 of unknown function3.7e-2873.42Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSK
        VQH+IEKCLIFHM+KEEC++ALSKHA+I P+ITSTVW ELEKENKEFF+AY +  +  ++MSEEET+QMIQK+I DSSK
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMILDSSK

AT5G02580.1 Plant protein 1589 of unknown function6.9e-1960.81Show/hide
Query:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMI
        V HLIE+C++F+M KEECMDAL KHA+IKPIITSTVW EL KENKEFFEAY       +  +E+ET++ I+ ++
Subjt:  VQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEAYAQSHNNSDRMSEEETSQMIQKMI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATGATTGTGAGTGAGAGCAAGTTCATTTACTTAATTTCATCCGACGTGAGTAAAGGGTTATCTGGCAATTCTTTTGAGGCTCAGATAATTTTACGGTCATCTTG
TTGGGGAGTGAGTAGAATCGAGCTCTCGAAGACAATTCATCTCATTGCATGCGGTAATTCTCTGCTGGAGGTGCAGCACCTGATAGAGAAGTGTCTGATCTTCCACATGA
CAAAAGAAGAGTGCATGGATGCCCTCTCCAAACATGCAGATATTAAACCTATCATCACGTCAACAGTATGGAGTGAATTAGAGAAGGAAAACAAGGAATTCTTTGAGGCA
TATGCACAATCTCATAACAACAGTGACAGAATGTCCGAGGAAGAGACAAGCCAAATGATCCAAAAGATGATATTGGATTCCAGCAAAGGGGACCCTAAAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAATGATTGTGAGTGAGAGCAAGTTCATTTACTTAATTTCATCCGACGTGAGTAAAGGGTTATCTGGCAATTCTTTTGAGGCTCAGATAATTTTACGGTCATCTTG
TTGGGGAGTGAGTAGAATCGAGCTCTCGAAGACAATTCATCTCATTGCATGCGGTAATTCTCTGCTGGAGGTGCAGCACCTGATAGAGAAGTGTCTGATCTTCCACATGA
CAAAAGAAGAGTGCATGGATGCCCTCTCCAAACATGCAGATATTAAACCTATCATCACGTCAACAGTATGGAGTGAATTAGAGAAGGAAAACAAGGAATTCTTTGAGGCA
TATGCACAATCTCATAACAACAGTGACAGAATGTCCGAGGAAGAGACAAGCCAAATGATCCAAAAGATGATATTGGATTCCAGCAAAGGGGACCCTAAAAACTAA
Protein sequenceShow/hide protein sequence
MRMIVSESKFIYLISSDVSKGLSGNSFEAQIILRSSCWGVSRIELSKTIHLIACGNSLLEVQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWSELEKENKEFFEA
YAQSHNNSDRMSEEETSQMIQKMILDSSKGDPKN