CuGenDBv2

Gene ID	Clc09G22120
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Genome location	ClcChr09:35471281..35472270
RNA-Seq Expression	Clc09G22120
Synteny	Clc09G22120
Gene Ontology terms	GO:0006631 - fatty acid metabolic process (biological process) GO:0044249 - cellular biosynthetic process (biological process) GO:1901576 - organic substance biosynthetic process (biological process) GO:0009507 - chloroplast (cellular component) GO:0000166 - nucleotide binding (molecular function) GO:0016740 - transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6579350.1 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

9.7e-12

72.73

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEFH EEEPYKDRIDSYQIKT LTKAIQTGT    KL G+ PI  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

QWV60849.1 acetyl-CoA carboxylase carboxyltransferase beta subunit [Cucurbita ficifolia]

2.2e-11

71.21

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEFH EEEPYKDRIDSYQIKT LT+AIQTGT    KL G+ PI  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

QZL38806.1 acetyl-CoA carboxylase beta subunit [Cucurbita ficifolia]

2.2e-11

71.21

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEFH EEEPYKDRIDSYQIKT LT+AIQTGT    KL G+ PI  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

YP_009447459.1 acetyl-CoA carboxylase beta subunit [Cucurbita maxima]

2.2e-11

71.21

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEFH EEEPYKDRIDSYQIKT LT+AIQTGT    KL G+ PI  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

YP_009447544.1 acetyl-CoA carboxylase beta subunit [Cucurbita moschata]

2.8e-11

71.21

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEFH EEEPYKDRIDSYQIKT LT+AIQTGT    KL G+ PI  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

TrEMBL top hits

e value

%identity

Alignment

A0A2H4T210 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

1.0e-11

71.21

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEFH EEEPYKDRIDSYQIKT LT+AIQTGT    KL G+ PI  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

A0A2H4T291 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

1.4e-11

71.21

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEFH EEEPYKDRIDSYQIKT LT+AIQTGT    KL G+ PI  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

A0A2H5A6F1 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

4.0e-11

66.67

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEFHLEEEPYKDRIDSYQ KT LT+A+QTGT    +L G+ P+  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

A0A344AXQ6 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

1.4e-11

71.21

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEFH EEEPYKDRIDSYQIKT LT+AIQTGT    KL G+ PI  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

A0A6B9TSR4 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

2.3e-11

68.18

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEFHLEEEPYKDRIDSYQ KT LT+A+QTGT    KL G+ P+  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

SwissProt top hits

e value

%identity

Alignment

B1A944 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

2.7e-12

65.15

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDE+MV LDPIEFH EEEPYKDRIDSYQ KT LT+A+QTGT    +L G+ PI  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

P49158 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

9.1e-13

65.15

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEFH EEEPYKDRIDSYQ KT LT+A+QTGT    +L G+ P+  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

Q09X08 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

2.0e-12

65.15

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEF+ EEEPYKDRIDSYQ KT LT+A+QTGT    KL G+ P+  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

Q0G9V3 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

3.5e-12

65.15

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEFH EEEPYKDRIDSYQ KT LT+A+QTG     +L G+ PI  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

Q49KY9 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

9.1e-13

66.67

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV LDPIEFH EEEPYKDRIDSYQ KT LT A+QTGT    +L G+ PI  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00500.1 acetyl-CoA carboxylase carboxyl transferase subunit beta

1.3e-09

56.06

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Query:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS
        MDEDMV  DPI+FH +EEPYK+RIDS Q  T LT A+QTGT    +L G+ P+  G   F   GGS
Subjt:  MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGS

Sequences

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CDS sequence

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ATGGATGAAGACATGGTCCCTTTGGATCCCATTGAATTTCATTTGGAGGAGGAACCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACAAGATTAACTAAG
GCTATTCAAACAGGCACAGTGTTGGCAAAAAAACTCGTGGGCCTCGACCCGATCGGGTCGGGGAATCCCCGGTTTGACCGAGGAGGGGGGTCAAACCAGGGAGAT
TCCTTAGTCGCAATCTCGCTCTTTCTCACAATCTCGCTGTCTCGCTCTCGCTCTATCTTAGGGAATAGGTCCTCACGGGGATCCATTTTCTCGTCGGGATGGATG
GGGCGGGGATGGGGAACCCCCGCTTGCATCGCCCCACCCCTGTTGCCAACTCTATGCTCACATGTTACACTAATGACTTTTATTGTCATTGACACGCAATCTTAG

mRNA sequence

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Protein sequence

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MDEDMVPLDPIEFHLEEEPYKDRIDSYQIKTRLTKAIQTGTVLAKKLVGLDPIGSGNPRFDRGGGSNQGDSLVAISLFLTISLSRSRSILGNRSSRGSIFSSGWM
GRGWGTPACIAPPLLPTLCSHVTLMTFIVIDTQS

Clc09G22120 (gene) of Watermelon (cordophanus) v2 genome