; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G22340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G22340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationClcChr09:35669650..35671714
RNA-Seq ExpressionClc09G22340
SyntenyClc09G22340
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ96496.1 chlorophyll a-b binding protein 6A [Cucumis melo var. makuwa]5.3e-13898.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+DPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

XP_004143800.1 chlorophyll a-b binding protein 6A, chloroplastic [Cucumis sativus]5.9e-13797.56Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+DPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

XP_008453995.1 PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Cucumis melo]2.4e-13898.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+DPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

XP_022133484.1 chlorophyll a-b binding protein 6A, chloroplastic [Momordica charantia]9.1e-13897.97Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGV  NASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+DPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

XP_038891246.1 chlorophyll a-b binding protein 6A, chloroplastic [Benincasa hispida]8.2e-13999.19Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGS+PGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+DPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

TrEMBL top hitse value%identityAlignment
A0A0A0KNM4 Chlorophyll a-b binding protein, chloroplastic2.9e-13797.56Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+DPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

A0A1S3BYE0 Chlorophyll a-b binding protein, chloroplastic1.2e-13898.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+DPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

A0A5A7TXV7 Chlorophyll a-b binding protein, chloroplastic1.2e-13898.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+DPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

A0A5D3BC57 Chlorophyll a-b binding protein, chloroplastic2.6e-13898.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+DPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

A0A6J1BW39 Chlorophyll a-b binding protein, chloroplastic4.4e-13897.97Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGV  NASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+DPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

SwissProt top hitse value%identityAlignment
P12360 Chlorophyll a-b binding protein 6A, chloroplastic2.3e-12085.77Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGI     PS LSS+KSKFAAA+P+   A N  SRFSMSA+WMPGQPRP YLDGSAPGDFGFD L LGEVP NLER+KESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA
        PGI+VPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYS+DP K +E KVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLA VGFCVQQSAY GTGPLENLATHLADPWHNNIGD+IIP+ I P
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

Q01667 Chlorophyll a-b binding protein 6, chloroplastic1.2e-11684.71Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+DP+KL+E KVKEIKNGRL
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRL

Query:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic2.2e-3840.95Show/hide
Query:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP
        W PG   P +LDGS  GD+GFDP  LG+  E                                            ++RF+E ELIH RWAMLA  G L  
Subjt:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP

Query:  EALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSRDPEKLKEYKVKEIKNGRLALLAFV
        E L    W  A +   + G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + DPEK  + ++ EIK+ RLA++AF+
Subjt:  EALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSRDPEKLKEYKVKEIKNGRLALLAFV

Query:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD
        GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD

Q9SDM1 Chlorophyll a-b binding protein 1B-21, chloroplastic1.4e-10474.49Show/hide
Query:  ASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVP
        +S+ L SC  +    PS+L+ S     + +P    A   S R +MSAEW PGQPRP +LDGS+PGDFGFDPL L  VPEN ERFKESE+ HCRWAML VP
Subjt:  ASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVP

Query:  GILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLAL
        G+LVPEALGLGNWVKAQEWAA+P GQATYLG PVPWG LPTIL IEFLAIAF E QR+MEKDPEKKKYPGGAFDPLG+S+DP K +E K+KEIKNGRLA+
Subjt:  GILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLAL

Query:  LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSI
        LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IPR+I
Subjt:  LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSI

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic2.5e-3737.23Show/hide
Query:  SNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVN---ASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------
        S    +  I  T   S +SS+ S+F A         +   A +  S    W PG   P YLDGS  GD+GFDP  LG+  E                   
Subjt:  SNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVN---ASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------

Query:  ------------------------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH
                                 L+RF+E ELIH RWAMLA  G +  E L    W  A +   + G  ++YLGQP+P+ ++ T++ IE L I ++E 
Subjt:  ------------------------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH

Query:  QRSMEKDPEKKKYPGGA-FDPLGYSRDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD
        QR+ E D EK+ YPGG  FDPLG + DP K  + ++ EIK+ RLA++ F+GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  QRSMEKDPEKKKYPGGA-FDPLGYSRDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD

Arabidopsis top hitse value%identityAlignment
AT3G54890.1 photosystem I light harvesting complex gene 18.5e-11884.71Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+DP+KL+E KVKEIKNGRL
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRL

Query:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

AT3G54890.2 photosystem I light harvesting complex gene 12.1e-9271.9Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAF                                  E KVKEIKNGRL
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRL

Query:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

AT3G54890.3 photosystem I light harvesting complex gene 12.3e-6278.81Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLA
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLA
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLA

AT3G54890.4 photosystem I light harvesting complex gene 17.5e-9081.41Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGR
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+DP+KL+E KVKEIKNG+
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGR

AT5G01530.1 light harvesting complex photosystem II1.6e-3940.95Show/hide
Query:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP
        W PG   P +LDGS  GD+GFDP  LG+  E                                            ++RF+E ELIH RWAMLA  G L  
Subjt:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP

Query:  EALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSRDPEKLKEYKVKEIKNGRLALLAFV
        E L    W  A +   + G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + DPEK  + ++ EIK+ RLA++AF+
Subjt:  EALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSRDPEKLKEYKVKEIKNGRLALLAFV

Query:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD
        GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAACACTTTGATGAGCTGTGGCATTGCCACCACCGCCTTCCCTTCAGTCCTTTCCTCCTCTAAGTCTAAATTCGCCGCCGCCGTCCCGATTTCTGGCGTCGC
CGTCAATGCATCATCCCGATTTTCCATGTCCGCCGAGTGGATGCCCGGCCAGCCCCGCCCTCCCTACCTCGACGGCTCCGCCCCCGGTGATTTTGGGTTCGACCCTCTTC
GGCTGGGAGAAGTGCCGGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGA
TTGGGCAACTGGGTGAAAGCTCAAGAATGGGCAGCAATTCCAGGAGGCCAAGCTACGTACTTGGGACAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGA
GTTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCAGGAGGTGCTTTTGACCCATTAGGCTACTCAAGAGACCCTG
AAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGGTTGGCGCTATTGGCTTTTGTTGGGTTCTGTGTGCAACAATCAGCATACCCAGGAACAGGGCCACTG
GAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGATATTATCATCCCCAGATCGATTTCGCCTTGA
mRNA sequenceShow/hide mRNA sequence
CTGGATATTGCACGTCAGCAAATAAAATGGATTGACAAATTCGAGCTGGACCAATGAGATCACAAAACCAACCCACACTTAGCCAATCAAAATCAAACTTTAGATTCCCC
AATCTCTCTTCTACAGGTGCTTTTAGTCCCCTTCCTTCCCTTCTTCTTCCTCCATTCCACTCTCTCAATCTCTTCTCACTCTTTTCTCACTGCTTCTTCAATGGCTTCCA
ACACTTTGATGAGCTGTGGCATTGCCACCACCGCCTTCCCTTCAGTCCTTTCCTCCTCTAAGTCTAAATTCGCCGCCGCCGTCCCGATTTCTGGCGTCGCCGTCAATGCA
TCATCCCGATTTTCCATGTCCGCCGAGTGGATGCCCGGCCAGCCCCGCCCTCCCTACCTCGACGGCTCCGCCCCCGGTGATTTTGGGTTCGACCCTCTTCGGCTGGGAGA
AGTGCCGGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGATTGGGCAACT
GGGTGAAAGCTCAAGAATGGGCAGCAATTCCAGGAGGCCAAGCTACGTACTTGGGACAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCC
ATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCAGGAGGTGCTTTTGACCCATTAGGCTACTCAAGAGACCCTGAAAAGTTGAA
GGAATACAAAGTCAAAGAGATCAAAAACGGTCGGTTGGCGCTATTGGCTTTTGTTGGGTTCTGTGTGCAACAATCAGCATACCCAGGAACAGGGCCACTGGAGAACTTGG
CAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGATATTATCATCCCCAGATCGATTTCGCCTTGAATTTTGTACTGAATCATACCAATTGTAATTAAATTTCTG
TGTATTGAATCTGAACTCAGGGCTTTCCTCTCTATATGGCTTTGAATCTGCTCTGTAACTTGATTTTGACGTTCATTTTAGTGCATGGAGTTACCCATTCGAGGAAGGAA
AAAGAAGATAAAATTACAAATTTAATCATTCAACTTTGAAGTTTATGTTTGTTGGATGTTGAACTTTTACACATATATAAACATACATTCAAGTTCATTGATA
Protein sequenceShow/hide protein sequence
MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALG
LGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPL
ENLATHLADPWHNNIGDIIIPRSISP