; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G22480 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G22480
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTranscription factor GTE9 isoform X4
Genome locationClcChr09:35863098..35864285
RNA-Seq ExpressionClc09G22480
SyntenyClc09G22480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061663.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa]4.3e-3353.69Show/hide
Query:  VNSSSTPIRPSKAKPKAKATIEKPKKAKAAWS-------------EDNDRVSMLKSRFATTILKAQRQLSLTERLKLKTAYIADKLP-----VPTPTQER
        V  SST I+P KAK     TI KPKKAK   +               N+RVSMLK RFA TILKAQ+QLS  ER+      +  K P      PT   + 
Subjt:  VNSSSTPIRPSKAKPKAKATIEKPKKAKAAWS-------------EDNDRVSMLKSRFATTILKAQRQLSLTERLKLKTAYIADKLP-----VPTPTQER

Query:  RSEASQKALPRKIKEP---------------------PTPTP--MEEIRKAARKALEELERRVDVEDSHKSVKDLEHLCGWPIPYVGGFKNRMEYYGLYL
        R EA+++AL RK KEP                     PTP P   EEIRKAAR+ALEELER VD+EDSHKSVKDLE LCGWPIPYVGGFKNRMEYYGLYL
Subjt:  RSEASQKALPRKIKEP---------------------PTPTP--MEEIRKAARKALEELERRVDVEDSHKSVKDLEHLCGWPIPYVGGFKNRMEYYGLYL

Query:  KDY
        K+Y
Subjt:  KDY

KAG6571342.1 hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sororia]3.9e-1841.08Show/hide
Query:  TVRAMTKRVVATKVNSSSTPIRPSKAKPKAKATIEKPKKAKAAWSEDNDRVSMLKSRFATTILKAQRQLSLTERLKLKTAYIADKLPVPTPTQERRSEAS
        +VRA + +  A K + S  P   +KAK  A  TI  P+   ++ S +++R  +LK +FA TI KAQR LS   R K+++             +E   + S
Subjt:  TVRAMTKRVVATKVNSSSTPIRPSKAKPKAKATIEKPKKAKAAWSEDNDRVSMLKSRFATTILKAQRQLSLTERLKLKTAYIADKLPVPTPTQERRSEAS

Query:  QKALPRKIKEPPTPT-----------PMEEIRKAARKALEELERRVDVEDSHKSVKDLEHLCGWPIPYVGGFKNRMEYYGLYLKD
        +    R++  P  P+             EE+R AAR+ LEE+ERRV V+DSH S+++ E LCG+PIPYVGGF NRM YYGLYLKD
Subjt:  QKALPRKIKEPPTPT-----------PMEEIRKAARKALEELERRVDVEDSHKSVKDLEHLCGWPIPYVGGFKNRMEYYGLYLKD

VFQ97081.1 unnamed protein product [Cuscuta campestris]1.9e-0436.96Show/hide
Query:  RVSMLKSRFATTILKAQRQLSLTERLKLKTAYIADKLPVPTPTQERRSEASQKAL---PRKIKEPPTPTPMEEIRKAARKALEELERRVDVEDSHKSVKD
        R +ML+SRFA TI KA  +  + + LKL+     ++L      ++ R E   KA     R   E       E+ R+AAR ALE++ER VD++D+ K +KD
Subjt:  RVSMLKSRFATTILKAQRQLSLTERLKLKTAYIADKLPVPTPTQERRSEASQKAL---PRKIKEPPTPTPMEEIRKAARKALEELERRVDVEDSHKSVKD

Query:  LEHLCGWP-----IPYVGGF-----KNRMEYYGLYLKD
        LE LC  P     +   GG      +N +E  GLY+KD
Subjt:  LEHLCGWP-----IPYVGGF-----KNRMEYYGLYLKD

XP_010929315.1 transcription factor GTE9 isoform X1 [Elaeis guineensis]2.5e-0437.41Show/hide
Query:  RVSMLKSRFATTILKAQRQLSLTERLKLKTAYI---ADKLPVPTPTQERRSEASQK---ALPRKIKEPPTPTPMEEIRKAARKALEELERRVDVEDSHKS
        R +MLKSRFA TILKAQ++  LT   K+  A +    +KL      ++ R EA  K   A  R   E       E  R+AAR AL+++E+ VDV++SH  
Subjt:  RVSMLKSRFATTILKAQRQLSLTERLKLKTAYI---ADKLPVPTPTQERRSEASQK---ALPRKIKEPPTPTPMEEIRKAARKALEELERRVDVEDSHKS

Query:  VKDLEHLCGWP----------IPYVGGFK------NRMEYYGLYLKD
        VKDLE   G+P          + +V GF+      N +E  GL++K+
Subjt:  VKDLEHLCGWP----------IPYVGGFK------NRMEYYGLYLKD

XP_010929323.1 transcription factor GTE9 isoform X2 [Elaeis guineensis]2.5e-0437.41Show/hide
Query:  RVSMLKSRFATTILKAQRQLSLTERLKLKTAYI---ADKLPVPTPTQERRSEASQK---ALPRKIKEPPTPTPMEEIRKAARKALEELERRVDVEDSHKS
        R +MLKSRFA TILKAQ++  LT   K+  A +    +KL      ++ R EA  K   A  R   E       E  R+AAR AL+++E+ VDV++SH  
Subjt:  RVSMLKSRFATTILKAQRQLSLTERLKLKTAYI---ADKLPVPTPTQERRSEASQK---ALPRKIKEPPTPTPMEEIRKAARKALEELERRVDVEDSHKS

Query:  VKDLEHLCGWP----------IPYVGGFK------NRMEYYGLYLKD
        VKDLE   G+P          + +V GF+      N +E  GL++K+
Subjt:  VKDLEHLCGWP----------IPYVGGFK------NRMEYYGLYLKD

TrEMBL top hitse value%identityAlignment
A0A0A0KGL2 Uncharacterized protein2.3e-3249.53Show/hide
Query:  VNSSSTPIRPSKAKPKAKATIEKPKKAK------------AAWSEDNDRVSMLKSRFATTILKAQRQLSLTERLKLKTAYIADKLPVP--TPTQERRS--
        V +SST I+P K   K    +++PKKAK              + + + RVSMLKSRFA+TILKAQ+QLS ++R   K   +  K P P  TP +ERR   
Subjt:  VNSSSTPIRPSKAKPKAKATIEKPKKAK------------AAWSEDNDRVSMLKSRFATTILKAQRQLSLTERLKLKTAYIADKLPVP--TPTQERRS--

Query:  --------------------------------EASQKALPRKIKEPPTP--TPMEEIRKAARKALEELERRVDVEDSHKSVKDLEHLCGWPIPYVGGFKN
                                        E  Q+AL RK+K PPTP  T  EEIR+AAR+ALE+LER VDVEDSHKSVKDLE LCGWPIP VGGFKN
Subjt:  --------------------------------EASQKALPRKIKEPPTP--TPMEEIRKAARKALEELERRVDVEDSHKSVKDLEHLCGWPIPYVGGFKN

Query:  RMEYYGLYLKDY
        RMEYYGLYLK+Y
Subjt:  RMEYYGLYLKDY

A0A484N6Z8 Bromo domain-containing protein9.2e-0536.96Show/hide
Query:  RVSMLKSRFATTILKAQRQLSLTERLKLKTAYIADKLPVPTPTQERRSEASQKAL---PRKIKEPPTPTPMEEIRKAARKALEELERRVDVEDSHKSVKD
        R +ML+SRFA TI KA  +  + + LKL+     ++L      ++ R E   KA     R   E       E+ R+AAR ALE++ER VD++D+ K +KD
Subjt:  RVSMLKSRFATTILKAQRQLSLTERLKLKTAYIADKLPVPTPTQERRSEASQKAL---PRKIKEPPTPTPMEEIRKAARKALEELERRVDVEDSHKSVKD

Query:  LEHLCGWP-----IPYVGGF-----KNRMEYYGLYLKD
        LE LC  P     +   GG      +N +E  GLY+KD
Subjt:  LEHLCGWP-----IPYVGGF-----KNRMEYYGLYLKD

A0A5D3DC97 Transcription factor GTE9 isoform X42.1e-3353.69Show/hide
Query:  VNSSSTPIRPSKAKPKAKATIEKPKKAKAAWS-------------EDNDRVSMLKSRFATTILKAQRQLSLTERLKLKTAYIADKLP-----VPTPTQER
        V  SST I+P KAK     TI KPKKAK   +               N+RVSMLK RFA TILKAQ+QLS  ER+      +  K P      PT   + 
Subjt:  VNSSSTPIRPSKAKPKAKATIEKPKKAKAAWS-------------EDNDRVSMLKSRFATTILKAQRQLSLTERLKLKTAYIADKLP-----VPTPTQER

Query:  RSEASQKALPRKIKEP---------------------PTPTP--MEEIRKAARKALEELERRVDVEDSHKSVKDLEHLCGWPIPYVGGFKNRMEYYGLYL
        R EA+++AL RK KEP                     PTP P   EEIRKAAR+ALEELER VD+EDSHKSVKDLE LCGWPIPYVGGFKNRMEYYGLYL
Subjt:  RSEASQKALPRKIKEP---------------------PTPTP--MEEIRKAARKALEELERRVDVEDSHKSVKDLEHLCGWPIPYVGGFKNRMEYYGLYL

Query:  KDY
        K+Y
Subjt:  KDY

A0A6I9RMI1 transcription factor GTE9 isoform X21.2e-0437.41Show/hide
Query:  RVSMLKSRFATTILKAQRQLSLTERLKLKTAYI---ADKLPVPTPTQERRSEASQK---ALPRKIKEPPTPTPMEEIRKAARKALEELERRVDVEDSHKS
        R +MLKSRFA TILKAQ++  LT   K+  A +    +KL      ++ R EA  K   A  R   E       E  R+AAR AL+++E+ VDV++SH  
Subjt:  RVSMLKSRFATTILKAQRQLSLTERLKLKTAYI---ADKLPVPTPTQERRSEASQK---ALPRKIKEPPTPTPMEEIRKAARKALEELERRVDVEDSHKS

Query:  VKDLEHLCGWP----------IPYVGGFK------NRMEYYGLYLKD
        VKDLE   G+P          + +V GF+      N +E  GL++K+
Subjt:  VKDLEHLCGWP----------IPYVGGFK------NRMEYYGLYLKD

A0A6I9RMR9 transcription factor GTE9 isoform X11.2e-0437.41Show/hide
Query:  RVSMLKSRFATTILKAQRQLSLTERLKLKTAYI---ADKLPVPTPTQERRSEASQK---ALPRKIKEPPTPTPMEEIRKAARKALEELERRVDVEDSHKS
        R +MLKSRFA TILKAQ++  LT   K+  A +    +KL      ++ R EA  K   A  R   E       E  R+AAR AL+++E+ VDV++SH  
Subjt:  RVSMLKSRFATTILKAQRQLSLTERLKLKTAYI---ADKLPVPTPTQERRSEASQK---ALPRKIKEPPTPTPMEEIRKAARKALEELERRVDVEDSHKS

Query:  VKDLEHLCGWP----------IPYVGGFK------NRMEYYGLYLKD
        VKDLE   G+P          + +V GF+      N +E  GL++K+
Subjt:  VKDLEHLCGWP----------IPYVGGFK------NRMEYYGLYLKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACTCCAACCAATTTTCTCCCGACGCACATTACCTAGCGTCGAAAAAAGTGACTTCTCCTTACTCCAAAGATTGCTTTATGGCGTCGGGAAAATGCCTTCTCCC
GACGGTTACGCATTCTCCCCACGGTCATGCGTCGGGAGCAATGCGTTATCCCACAGTTAGGGCAATGACGAAGCGTGTGGTTGCGACGAAGGTGAATAGTTCTTCCACTC
CCATCAGACCATCCAAGGCCAAGCCCAAGGCCAAGGCGACGATCGAGAAGCCGAAGAAAGCAAAAGCAGCGTGGTCTGAAGATAATGATCGAGTGAGTATGTTGAAGAGT
AGATTTGCAACTACGATCTTGAAAGCACAGCGACAGCTTTCTCTAACTGAAAGATTAAAACTAAAGACGGCCTACATTGCGGACAAACTTCCGGTCCCGACTCCGACTCA
AGAACGGAGATCAGAAGCCTCCCAAAAGGCTTTGCCGAGGAAGATCAAGGAACCTCCGACTCCTACTCCGATGGAAGAAATCAGAAAAGCGGCTCGAAAAGCTTTGGAGG
AGTTGGAGCGGAGAGTTGACGTTGAAGACAGCCACAAATCGGTGAAGGATTTGGAGCATCTGTGCGGTTGGCCGATTCCCTACGTTGGTGGTTTCAAGAACAGGATGGAA
TATTATGGTTTATATTTGAAGGATTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACTCCAACCAATTTTCTCCCGACGCACATTACCTAGCGTCGAAAAAAGTGACTTCTCCTTACTCCAAAGATTGCTTTATGGCGTCGGGAAAATGCCTTCTCCC
GACGGTTACGCATTCTCCCCACGGTCATGCGTCGGGAGCAATGCGTTATCCCACAGTTAGGGCAATGACGAAGCGTGTGGTTGCGACGAAGGTGAATAGTTCTTCCACTC
CCATCAGACCATCCAAGGCCAAGCCCAAGGCCAAGGCGACGATCGAGAAGCCGAAGAAAGCAAAAGCAGCGTGGTCTGAAGATAATGATCGAGTGAGTATGTTGAAGAGT
AGATTTGCAACTACGATCTTGAAAGCACAGCGACAGCTTTCTCTAACTGAAAGATTAAAACTAAAGACGGCCTACATTGCGGACAAACTTCCGGTCCCGACTCCGACTCA
AGAACGGAGATCAGAAGCCTCCCAAAAGGCTTTGCCGAGGAAGATCAAGGAACCTCCGACTCCTACTCCGATGGAAGAAATCAGAAAAGCGGCTCGAAAAGCTTTGGAGG
AGTTGGAGCGGAGAGTTGACGTTGAAGACAGCCACAAATCGGTGAAGGATTTGGAGCATCTGTGCGGTTGGCCGATTCCCTACGTTGGTGGTTTCAAGAACAGGATGGAA
TATTATGGTTTATATTTGAAGGATTATTAA
Protein sequenceShow/hide protein sequence
MENSNQFSPDAHYLASKKVTSPYSKDCFMASGKCLLPTVTHSPHGHASGAMRYPTVRAMTKRVVATKVNSSSTPIRPSKAKPKAKATIEKPKKAKAAWSEDNDRVSMLKS
RFATTILKAQRQLSLTERLKLKTAYIADKLPVPTPTQERRSEASQKALPRKIKEPPTPTPMEEIRKAARKALEELERRVDVEDSHKSVKDLEHLCGWPIPYVGGFKNRME
YYGLYLKDY