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Clc09G22850 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G22850
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBnaC05g40260D protein
Genome locationClcChr09:36222386..36222841
RNA-Seq ExpressionClc09G22850
SyntenyClc09G22850
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44005.1 hypothetical protein Csa_018201 [Cucumis sativus]3.0e-4371.52Show/hide
Query:  MDKNSMFLLCNALLVFLANYSGLFKSL----SSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERF
        +DKNSMFLLCNALLVFLANYSGLFKSL    SSSPK+ D NFR FDFGLD L QKP  IHSET EEKKDD  +N  NL++++++         E L E  
Subjt:  MDKNSMFLLCNALLVFLANYSGLFKSL----SSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERF

Query:  FGGETGELEEMI---EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
        FG ETGEL EMI   EEE+E NCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  FGGETGELEEMI---EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

TYK07937.1 uncharacterized protein E5676_scaffold265G00530 [Cucumis melo var. makuwa]4.7e-4472.26Show/hide
Query:  MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERFFGGETGELE
        MFLLCNALLVFLANYSGLFKSLSSSPK+ D NFR FDFGLD L QKP   HSET EEKKDD Q+N  + +++EE         EE L ER FG ETGE+ 
Subjt:  MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERFFGGETGELE

Query:  EMI---------EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
        EMI         EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  EMI---------EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

XP_008462992.1 PREDICTED: uncharacterized protein LOC103501239 [Cucumis melo]2.9e-4670.73Show/hide
Query:  MDKNSMFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERFFGGE
        +DKNSMFLLCNALLVFLANYSGLFKSLSSSPK+ D NFR FDFGLD L QKP   HSET EEKKDD Q+N  + +++EE         EE L ER FG E
Subjt:  MDKNSMFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERFFGGE

Query:  TGELEEMI-------------EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
        TGE+ EMI             EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  TGELEEMI-------------EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

XP_011659727.1 uncharacterized protein LOC105436244 [Cucumis sativus]1.4e-4071.24Show/hide
Query:  MFLLCNALLVFLANYSGLFKSL----SSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERFFGGET
        MFLLCNALLVFLANYSGLFKSL    SSSPK+ D NFR FDFGLD L QKP  IHSET EEKKDD  +N  NL++++++         E L E  FG ET
Subjt:  MFLLCNALLVFLANYSGLFKSL----SSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERFFGGET

Query:  GELEEMI---EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
        GEL EMI   EEE+E NCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  GELEEMI---EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

XP_038896510.1 uncharacterized protein LOC120084761 [Benincasa hispida]2.9e-5483.56Show/hide
Query:  MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERFFGGETGELE
        MF+LCNALLVFLANYSGLFKSLSSSPKNFDPNFR+FDFGLD L  KPPLIHSE AEEKKDDPQENR NLQEEE+     E+++ + L E FFGGETGE+E
Subjt:  MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERFFGGETGELE

Query:  EMIEEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
        E+IEEEEEGNCGV+SDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  EMIEEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

TrEMBL top hitse value%identityAlignment
A0A0A0K300 Uncharacterized protein1.5e-4371.52Show/hide
Query:  MDKNSMFLLCNALLVFLANYSGLFKSL----SSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERF
        +DKNSMFLLCNALLVFLANYSGLFKSL    SSSPK+ D NFR FDFGLD L QKP  IHSET EEKKDD  +N  NL++++++         E L E  
Subjt:  MDKNSMFLLCNALLVFLANYSGLFKSL----SSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERF

Query:  FGGETGELEEMI---EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
        FG ETGEL EMI   EEE+E NCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  FGGETGELEEMI---EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

A0A1S3CI71 uncharacterized protein LOC1035012391.4e-4670.73Show/hide
Query:  MDKNSMFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERFFGGE
        +DKNSMFLLCNALLVFLANYSGLFKSLSSSPK+ D NFR FDFGLD L QKP   HSET EEKKDD Q+N  + +++EE         EE L ER FG E
Subjt:  MDKNSMFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERFFGGE

Query:  TGELEEMI-------------EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
        TGE+ EMI             EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  TGELEEMI-------------EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

A0A5D3C7J6 Uncharacterized protein2.3e-4472.26Show/hide
Query:  MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERFFGGETGELE
        MFLLCNALLVFLANYSGLFKSLSSSPK+ D NFR FDFGLD L QKP   HSET EEKKDD Q+N  + +++EE         EE L ER FG ETGE+ 
Subjt:  MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERFFGGETGELE

Query:  EMI---------EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
        EMI         EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  EMI---------EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

A0A6J1F6C4 uncharacterized protein LOC1114427421.1e-3562.96Show/hide
Query:  MDKNSMFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFG------LDFLHQKPPLIHSET-AEEKKDDPQENRANLQEEEEKEDEDEDEDEERLV
        +DKNSMFLLCNALLVFLANYSGLFKSLSSS ++FDP  RL+DFG         L QKPPLI +ET A+EK DDP E   +  E        E+++   L 
Subjt:  MDKNSMFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFG------LDFLHQKPPLIHSET-AEEKKDDPQENRANLQEEEEKEDEDEDEDEERLV

Query:  ERFFGGETGELEEMI----EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
         RFF  ETGE+E+      EEEEEGN GV+SDEEL RKFDEFIKRMKEEI+LDDA RTLVVV
Subjt:  ERFFGGETGELEEMI----EEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

A0A6J1IEZ8 uncharacterized protein LOC1114758274.3e-3562.35Show/hide
Query:  MDKNSMFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFG------LDFLHQKPPLIHSE-TAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLV
        +DKNSMFLLCNALLVFLANYSGLFKSLSSS ++FDP  RL+DFG         L QKPPLI +E  A+EK DDP E   +  E        E+++   L 
Subjt:  MDKNSMFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFG------LDFLHQKPPLIHSE-TAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLV

Query:  ERFFGGETGELEE----MIEEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
         RFF  ETGE+E+      EEEEEGN GV+SDEEL RKFDEFIKRMKEEI+LDDA RTLVVV
Subjt:  ERFFGGETGELEE----MIEEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13130.1 unknown protein1.5e-1137.74Show/hide
Query:  MDKNSMFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDF------LHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVE
        +DKN MFLLCN L+V +A  SGL  S     K +    + FD+G DF      L  +    H    E    +      + + +E +++E+ED+D+  L +
Subjt:  MDKNSMFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDF------LHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVE

Query:  RFFGGETGELEEMIEEEEEGNCGVM--SDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
             E G     I EEEEGN GVM  ++EE+N+KFDEFI++MKEE+ + +A R L++V
Subjt:  RFFGGETGELEEMIEEEEEGNCGVM--SDEELNRKFDEFIKRMKEEIILDDAPRTLVVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGAACTCCATGTTCCTCCTCTGTAATGCTCTCCTCGTTTTCCTCGCAAATTACTCTGGTCTCTTCAAATCTTTGTCTTCTTCCCCAAAGAACTTTGACCCAAA
TTTCAGACTCTTTGACTTTGGCCTTGACTTCCTTCATCAGAAACCACCATTGATTCACTCTGAAACTGCAGAAGAAAAGAAAGATGACCCACAAGAAAACAGAGCAAATT
TGCAAGAAGAAGAAGAAAAAGAAGATGAAGATGAAGATGAAGATGAAGAAAGGTTAGTGGAGAGGTTTTTTGGAGGTGAAACAGGGGAACTTGAGGAGATGATAGAAGAG
GAAGAAGAAGGGAATTGTGGAGTGATGAGTGATGAAGAATTGAATAGAAAGTTTGATGAATTCATCAAAAGAATGAAGGAAGAAATCATTCTAGATGATGCTCCAAGAAC
TCTAGTTGTAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGAACTCCATGTTCCTCCTCTGTAATGCTCTCCTCGTTTTCCTCGCAAATTACTCTGGTCTCTTCAAATCTTTGTCTTCTTCCCCAAAGAACTTTGACCCAAA
TTTCAGACTCTTTGACTTTGGCCTTGACTTCCTTCATCAGAAACCACCATTGATTCACTCTGAAACTGCAGAAGAAAAGAAAGATGACCCACAAGAAAACAGAGCAAATT
TGCAAGAAGAAGAAGAAAAAGAAGATGAAGATGAAGATGAAGATGAAGAAAGGTTAGTGGAGAGGTTTTTTGGAGGTGAAACAGGGGAACTTGAGGAGATGATAGAAGAG
GAAGAAGAAGGGAATTGTGGAGTGATGAGTGATGAAGAATTGAATAGAAAGTTTGATGAATTCATCAAAAGAATGAAGGAAGAAATCATTCTAGATGATGCTCCAAGAAC
TCTAGTTGTAGTTTGA
Protein sequenceShow/hide protein sequence
MDKNSMFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEERLVERFFGGETGELEEMIEE
EEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV