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Clc09G22970 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G22970
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionsperm mitochondrial-associated cysteine-rich protein-like
Genome locationClcChr09:36314563..36315159
RNA-Seq ExpressionClc09G22970
SyntenyClc09G22970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607747.1 hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4273.08Show/hide
Query:  PAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPPPFAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPQATAVNGNIY
        PAKFLALV+VFHL SA++A DDA+M TP SC+NC +CQSACRPPP     L PPPPPP AEPEPLPVPV P NCPPTIVQCCQF+PPP P       NIY
Subjt:  PAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPPPFAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPQATAVNGNIY

Query:  TPIYNESSSSFLKVGLASVLAPVFGLAATF
        TP YNES SSFLK GL SVLAPVFG+AA F
Subjt:  TPIYNESSSSFLKVGLASVLAPVFGLAATF

KAG7037325.1 hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-4373.85Show/hide
Query:  PAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPPPFAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPQATAVNGNIY
        PAKFLALV+VFHL SA++A DDA+M TP SC+NC +CQSACRPPP     L PPPPPP AEPEPLPVPV PANCPPTIVQCCQF+PPP P       NIY
Subjt:  PAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPPPFAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPQATAVNGNIY

Query:  TPIYNESSSSFLKVGLASVLAPVFGLAATF
        TP YNES SSFLK GL SVLAPVFG+AA F
Subjt:  TPIYNESSSSFLKVGLASVLAPVFGLAATF

KGN44024.1 hypothetical protein Csa_011878 [Cucumis sativus]5.2e-5084.44Show/hide
Query:  FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYE--PLPLSPPPPPPFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAV
        FPAK LALVVVF+LN+AVSATDDAAM TPISCDNCTICQS C PPP E  PLPLSPPPP P+AEPEPLP PVAPANCPPTIVQCCQFL  PPPPPQATAV
Subjt:  FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYE--PLPLSPPPPPPFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAV

Query:  NGNIYTPIYNESSSSFLKVGLASVLAPVFGLAATF
        NGN+YTPIYN SSSSFL+VGL S LAPVFGL A F
Subjt:  NGNIYTPIYNESSSSFLKVGLASVLAPVFGLAATF

XP_008463043.1 PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis melo]1.9e-5285.29Show/hide
Query:  FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPP---PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATA
        FPAK LALVVVF+LNSAVSATDDAAM TPISCDNCTICQS CRPP  EPLPL PPPPP   P+AEPEPLP+PVAPANCPPTIVQCCQFL  PPPPPQATA
Subjt:  FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPP---PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATA

Query:  VNGNIYTPIYNESSSSFLKVGLASVLAPVFGLAATF
         NGNIYTPIYNESSSSFL+VGL S LAPVFGL A F
Subjt:  VNGNIYTPIYNESSSSFLKVGLASVLAPVFGLAATF

XP_011659730.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus]5.2e-5084.44Show/hide
Query:  FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYE--PLPLSPPPPPPFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAV
        FPAK LALVVVF+LN+AVSATDDAAM TPISCDNCTICQS C PPP E  PLPLSPPPP P+AEPEPLP PVAPANCPPTIVQCCQFL  PPPPPQATAV
Subjt:  FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYE--PLPLSPPPPPPFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAV

Query:  NGNIYTPIYNESSSSFLKVGLASVLAPVFGLAATF
        NGN+YTPIYN SSSSFL+VGL S LAPVFGL A F
Subjt:  NGNIYTPIYNESSSSFLKVGLASVLAPVFGLAATF

TrEMBL top hitse value%identityAlignment
A0A0A0K536 Uncharacterized protein2.5e-5084.44Show/hide
Query:  FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYE--PLPLSPPPPPPFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAV
        FPAK LALVVVF+LN+AVSATDDAAM TPISCDNCTICQS C PPP E  PLPLSPPPP P+AEPEPLP PVAPANCPPTIVQCCQFL  PPPPPQATAV
Subjt:  FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYE--PLPLSPPPPPPFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAV

Query:  NGNIYTPIYNESSSSFLKVGLASVLAPVFGLAATF
        NGN+YTPIYN SSSSFL+VGL S LAPVFGL A F
Subjt:  NGNIYTPIYNESSSSFLKVGLASVLAPVFGLAATF

A0A1S3CI95 sperm mitochondrial-associated cysteine-rich protein-like9.2e-5385.29Show/hide
Query:  FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPP---PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATA
        FPAK LALVVVF+LNSAVSATDDAAM TPISCDNCTICQS CRPP  EPLPL PPPPP   P+AEPEPLP+PVAPANCPPTIVQCCQFL  PPPPPQATA
Subjt:  FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPP---PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATA

Query:  VNGNIYTPIYNESSSSFLKVGLASVLAPVFGLAATF
         NGNIYTPIYNESSSSFL+VGL S LAPVFGL A F
Subjt:  VNGNIYTPIYNESSSSFLKVGLASVLAPVFGLAATF

A0A6A1VX00 4Fe-4S ferredoxin-type domain-containing protein6.0e-0439.57Show/hide
Query:  NSAVSATDDAA---MVTPISCDNCTICQSACRPP----PYEPL----PLSPPPPPPFAE----------PEPLPVP---VAPANCPP-TIVQCCQFLPPP
        N   SAT +A+   + +P +C NCT+CQ  C  P    P  PL    PL PPPPP  AE          P P P P    A  NCPP T+VQCCQ+   P
Subjt:  NSAVSATDDAA---MVTPISCDNCTICQSACRPP----PYEPL----PLSPPPPPPFAE----------PEPLPVP---VAPANCPP-TIVQCCQFLPPP

Query:  PPQATAVNGNIYTPIYNESSSSFLKVGLASVLAPVFGLA
        PP A       Y P  N S+S    V    V+  VF  A
Subjt:  PPQATAVNGNIYTPIYNESSSSFLKVGLASVLAPVFGLA

W9QFT0 Uncharacterized protein5.5e-0537.39Show/hide
Query:  AMVTPISCDNCTICQSACRPPPYEPLPL--SPPPPPPFAEPEPLPVPVAP------ANCPPTIVQCCQFLPPPPPQATAVNGNIYTPIYNESSSSFLKVG
        A+ +P  C NCT+CQ  C  PP    P   +PPPPPP     P  +P+ P        CPPT +QCCQ+ PPPP         +Y P YN +    L + 
Subjt:  AMVTPISCDNCTICQSACRPPPYEPLPL--SPPPPPPFAEPEPLPVPVAP------ANCPPTIVQCCQFLPPPPPQATAVNGNIYTPIYNESSSSFLKVG

Query:  LASVLAPVFGLAATF
        L  ++  +F  A TF
Subjt:  LASVLAPVFGLAATF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCCGGCCAATTTTCCGGCGAAATTTCTGGCTCTGGTTGTCGTTTTCCACCTCAACTCCGCCGTCTCCGCCACCGACGACGCTGCCATGGTCACACCCATTTCCTG
CGACAACTGCACCATTTGTCAATCCGCCTGCCGCCCACCGCCGTACGAGCCACTGCCACTCTCGCCGCCACCGCCGCCGCCGTTTGCAGAGCCAGAGCCACTGCCGGTTC
CAGTTGCTCCTGCGAACTGCCCTCCCACCATTGTCCAGTGCTGTCAGTTTCTTCCGCCGCCGCCGCCGCAAGCGACGGCGGTGAATGGTAATATATATACACCGATTTAT
AATGAGTCGTCTTCTTCGTTTTTGAAAGTTGGGTTGGCCTCTGTTTTGGCCCCTGTTTTTGGGTTGGCCGCCACTTTCTGA
mRNA sequenceShow/hide mRNA sequence
GTTTCTTTCCCATTTTTCTGCCTTTATAAATTCTCAATCCTTCCTTTCCCTTCAAACCCAGCCCAAAAATCCCTCCTTTTTCACCTCCCCATTCAATTCAATATGTTTCC
GGCCAATTTTCCGGCGAAATTTCTGGCTCTGGTTGTCGTTTTCCACCTCAACTCCGCCGTCTCCGCCACCGACGACGCTGCCATGGTCACACCCATTTCCTGCGACAACT
GCACCATTTGTCAATCCGCCTGCCGCCCACCGCCGTACGAGCCACTGCCACTCTCGCCGCCACCGCCGCCGCCGTTTGCAGAGCCAGAGCCACTGCCGGTTCCAGTTGCT
CCTGCGAACTGCCCTCCCACCATTGTCCAGTGCTGTCAGTTTCTTCCGCCGCCGCCGCCGCAAGCGACGGCGGTGAATGGTAATATATATACACCGATTTATAATGAGTC
GTCTTCTTCGTTTTTGAAAGTTGGGTTGGCCTCTGTTTTGGCCCCTGTTTTTGGGTTGGCCGCCACTTTCTGAAGCTTTTGGAAAGTTATTTGTTCAGGGGTTTTGTTAA
TAAGATGTTTGATTTTCTTGGATGGTGGCTATGAAGTTGTGTAATGG
Protein sequenceShow/hide protein sequence
MFPANFPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPPPFAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPQATAVNGNIYTPIY
NESSSSFLKVGLASVLAPVFGLAATF